| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is yfhB
Identifier: 51597198
GI number: 51597198
Start: 3413948
End: 3414595
Strand: Reverse
Name: yfhB
Synonym: YPTB2882
Alternate gene names: 51597198
Gene position: 3414595-3413948 (Counterclockwise)
Preceding gene: 51597199
Following gene: 51597197
Centisome position: 71.97
GC content: 51.54
Gene sequence:
>648_bases GTGGTTGAACCGCAATCAGCCGGGGCGAAACGCATTATCTTTTTTGATTTAGATGGCACGTTACATCAACAGGATATGTT CGGCAGTTTTTTGCGTTTTCTATTACGCCACTTGCCGCTTAATCTGTTACTGGTTATCCCGTTGCTACCACTAATTGGCG TAGGGCTCCTGGTGGGGGGGCGTTGTGCACGTTGGCCGATGAGCCTCTTGTTGTGGGCGATGACTTTTGGGCGACGGGAA GCACATCTGCGCGACCTGGAGTGGCGCTTTGTGGCCGCATTTCGCCAAAAAGTGACTGAATTCCCCGTGGTTGCTATGCG CTTACGCCAGTATCTGGAAAGCAGCGATGCAGAGGTGTGGTTAATCACCGGCTCCCCACAGCGGCTGGTCGAACAGGTTT ACCATGATTCAAACTTTATACACCGCTTACGGTTGATAGGTAGCCGCATGGAACGGCGCAATGGGGGATGGGTGTTGCCA CTACGTTGTTTAGGGCCTGAAAAAGTGGTGCAATTAGAACAGCGTCTGGGGTCTCCACTGAAGTTATATAGTGGGTACAG CGACAGTAAGCAGGATAATCCGCTGTTAGCTTTTTGCGAACACCGCTGGCGGGTAAGTAAAACCGGCGAATTACAGCAAT TGGAGTAG
Upstream 100 bases:
>100_bases ATAGCTATCACTGCATTATTGGGTTTTATCTTGATGATTTTAAGGAGGCTTTTTGAGCGTAAAGCAAGCAGATGTTAGCG ATAGAAATAGGGCTGATGGG
Downstream 100 bases:
>100_bases CGAGCCATTTTAGCCACTAGCCAAAGCACCCCCCTGTTTTGCGACAAACTAACCGACTCGCCAGCAAGCTGTGTATAATG CCCGCCGCAAAAGTGCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MVEPQSAGAKRIIFFDLDGTLHQQDMFGSFLRFLLRHLPLNLLLVIPLLPLIGVGLLVGGRCARWPMSLLLWAMTFGRRE AHLRDLEWRFVAAFRQKVTEFPVVAMRLRQYLESSDAEVWLITGSPQRLVEQVYHDSNFIHRLRLIGSRMERRNGGWVLP LRCLGPEKVVQLEQRLGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKTGELQQLE
Sequences:
>Translated_215_residues MVEPQSAGAKRIIFFDLDGTLHQQDMFGSFLRFLLRHLPLNLLLVIPLLPLIGVGLLVGGRCARWPMSLLLWAMTFGRRE AHLRDLEWRFVAAFRQKVTEFPVVAMRLRQYLESSDAEVWLITGSPQRLVEQVYHDSNFIHRLRLIGSRMERRNGGWVLP LRCLGPEKVVQLEQRLGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKTGELQQLE >Mature_215_residues MVEPQSAGAKRIIFFDLDGTLHQQDMFGSFLRFLLRHLPLNLLLVIPLLPLIGVGLLVGGRCARWPMSLLLWAMTFGRRE AHLRDLEWRFVAAFRQKVTEFPVVAMRLRQYLESSDAEVWLITGSPQRLVEQVYHDSNFIHRLRLIGSRMERRNGGWVLP LRCLGPEKVVQLEQRLGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKTGELQQLE
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082129, Length=206, Percent_Identity=66.504854368932, Blast_Score=260, Evalue=6e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006435 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24921; Mature: 24921
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEPQSAGAKRIIFFDLDGTLHQQDMFGSFLRFLLRHLPLNLLLVIPLLPLIGVGLLVGG CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC RCARWPMSLLLWAMTFGRREAHLRDLEWRFVAAFRQKVTEFPVVAMRLRQYLESSDAEVW CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LITGSPQRLVEQVYHDSNFIHRLRLIGSRMERRNGGWVLPLRCLGPEKVVQLEQRLGSPL EEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCE KLYSGYSDSKQDNPLLAFCEHRWRVSKTGELQQLE EECCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCCC >Mature Secondary Structure MVEPQSAGAKRIIFFDLDGTLHQQDMFGSFLRFLLRHLPLNLLLVIPLLPLIGVGLLVGG CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC RCARWPMSLLLWAMTFGRREAHLRDLEWRFVAAFRQKVTEFPVVAMRLRQYLESSDAEVW CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE LITGSPQRLVEQVYHDSNFIHRLRLIGSRMERRNGGWVLPLRCLGPEKVVQLEQRLGSPL EEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCE KLYSGYSDSKQDNPLLAFCEHRWRVSKTGELQQLE EECCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1602968; 9278503 [H]