| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597162
Identifier: 51597162
GI number: 51597162
Start: 3361914
End: 3364334
Strand: Reverse
Name: 51597162
Synonym: YPTB2846
Alternate gene names: NA
Gene position: 3364334-3361914 (Counterclockwise)
Preceding gene: 51597167
Following gene: 51597161
Centisome position: 70.91
GC content: 39.2
Gene sequence:
>2421_bases ATGAGATATAATCGTAACCATATGCTAACGTTAATGTTCTCTTTATTAATTTTTGATGCCTATGCAAATGAACCCAAAGT CTGTTTTTATATGGATGATGACTATAATGGTGAGTCTCTCTGCGCGGCTCAAGGGAACTCAGTTGCCAGTATTCCGGATA AATGGAATGATCGCATATCCTCAATTTCCATTCCCCACGGTTTAGTTGTCACCGTCTATGAAGATGTCGATTTTTTGGGC GCTTCTCGGTCTTTTGAAGCCGATGTGGATTTGGTTTCAGATAAGGATTTGATATATTTAAATGATAATATAAGTGCATT TAAAATAAAAAAGGCAGTTTGTTTTTATGGCGAAAGTAACTTTACAGGTGACTCGTTGTGCTTATCTGGTGATGAGCAAT TTGACTTGTATAGCGGTAGCTATCCTGAAAGGAAACAATCTCATTTGGTAAATCCATTGAATGATGACGTATATTCAATA AAAATCCCTCCAGGAATGCAAACTACAGTCTACGAGGACGATAACTATAATGGTAAACACTTTGTTTTGACAGAGGATTA CACATCTGATGATTTATTGATTATAAGAATGAATAATAAAATCAGTAGTATGCGTGTTTCTCAAGATGAGGATTTCATTT GTGATCGTTTCTGTTCTATAAAAAAATCAATTAAATTTAAAATACAAAAAAGTTTTGGATCCTATTGGCTTGATCCACGA ATAAAATACAGGGATATATTAGTCGACTTTCAGTTGTCTGACACCGATGATTATTCAATAAAATTTTTCGATGAGGGTCT TATAAAAGTTAAAGATTATAAATTATTTTTCTTTGATGGTAATAAAAAATATGGTGAGGGTTTTTTGTTTAATTTAGATA ACAAAAGCAGTAATTTGTCATTTTTATTGCGTTTTAATGGTGGTTTTTTTCAAATTCAATTTGTTGAATCATTAAATAAT GAAATTGTTTATTCTTCTCCTTTGATTGGAACATTATTTGATGATGTTAACTCAAATGTTATTTTTGATATTAATAATAT AGATGCAAATAGCCCAATAGTTATCGATAAAATGGTATTAACCGTTGGTAAGGAGCATAACCGGGCTGAACGTAGTACTC TGGGTCTAGCGACTTGTTGGACAATACCCATACTGAGTATTTATAACTATATTGTTCAGGGGCATTGTAATCAGGCAGAT AAGTTTGTCCATAATGCTGCCGATTTTTTTGGTAGCCCGGCAGATAAAATATTGCAAATATTTGGTTCCTCTTTACCCTT GCCTAAAAAAAATAGCAATGAAACATTAGATGACGAATCTGCATTAATTAATTTTATGTCTGATGTTAAAGGGACGTTAA CCTATATTACGACCAATATGGGCGAACACGCATTAACCGTACCGGCAACGGCACTCGCGTGCAAAGCCTCAATGCGAGAG AAAATCCTGCCTCATCTGCGTAGCCGACGTGATCTTGCGCCAGGGTGTATCGATTGGACTTTGAGTATTTTAACCGATTT TACCTTGTTGTTTGGTGCCAGCATTGAGTATTGGAATAGCAAAAATTTTGGGCGAGTAATCGAAAATATTGTTCGCGAAG GGGAGATTGGTTCTGCTGTGGCCGATGTGGAGACTGCATCACGTTTAGTCGAGTCAGTTCAGGCCCATGTGGCTGAAGCG ACAGAGGTTGCAGATATCATTCATCTCAAAACGGCATTCGATTTTTCCCAGCTAAGTTATGTTAATTATTTACGCCATAC TGAAGAGGAAGTGATACCGCCACAAAGCGCGCAGACGCTACCCTTAGGGCGTTATGAACTGGCACTGGTAGATTACCATT TTATCGAGACGGTACCCAGGATTCGTCAGGATGGCCGTTGGGTAGAACGCCCAGATCTGCATTTTGATATTGAAGTGATT AGCGGGGTTCCCGAAGAGACTAATGCGAGCCGGCAAGTGCTTTTGCCGATTATCGAAGCGTGGCAGCATAGCTATCGTCA ACAAGAATTACTTTTTCAATCCTCTGAAATTCCTCCAGAAAGTGCCTTGGCTCGGAATGAAATTGAGCCGTTGTTAGAGG CTTCACGACTGACTAGCGAAGTTGCAACCAGTTGGTTAAGGACTAGCCGTGATGATTTTGTTTACGTCGTAGTCCGTTTG GAGGGCGAGGTTATTAGCCTCACCATGGCAGTCGATATCAATACTAATTATGTGGGGGTTGCCGGGTCATTAACCAACCC AGATTATGTACTGACACCTAATGCGGAAGGGGCCGTCAGAGGCGCGGGTACGGCGGCGACCCGAGCATTGGCTGACCACT TTAAACGCAAAGGGAAAATATCCTTGGTCTCTTCTGTGATCAGTCAGCCATCCGCGATTGTGAAGAAAAAAGTGGGCTTT AGATTTATTGAAGAGCTCTAA
Upstream 100 bases:
>100_bases AAATTATTTATTCTAATATAAAATTTTTAGGTCAGGAAATAACAATCTCTTATTTTTAAAATAATGGATTATTAATAATA GTTTAAAAGGTATATATATT
Downstream 100 bases:
>100_bases GAGGACCTAGCACTAACTAATTGAAAAAAAGATAAATTAAATATTATTATGTGCGCTTCCTCAGTGACATTAGGTGTGGT TAGGTTTTTACACAAAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVASIPDKWNDRISSISIPHGLVVTVYEDVDFLG ASRSFEADVDLVSDKDLIYLNDNISAFKIKKAVCFYGESNFTGDSLCLSGDEQFDLYSGSYPERKQSHLVNPLNDDVYSI KIPPGMQTTVYEDDNYNGKHFVLTEDYTSDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWLDPR IKYRDILVDFQLSDTDDYSIKFFDEGLIKVKDYKLFFFDGNKKYGEGFLFNLDNKSSNLSFLLRFNGGFFQIQFVESLNN EIVYSSPLIGTLFDDVNSNVIFDINNIDANSPIVIDKMVLTVGKEHNRAERSTLGLATCWTIPILSIYNYIVQGHCNQAD KFVHNAADFFGSPADKILQIFGSSLPLPKKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE KILPHLRSRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAVADVETASRLVESVQAHVAEA TEVADIIHLKTAFDFSQLSYVNYLRHTEEEVIPPQSAQTLPLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVI SGVPEETNASRQVLLPIIEAWQHSYRQQELLFQSSEIPPESALARNEIEPLLEASRLTSEVATSWLRTSRDDFVYVVVRL EGEVISLTMAVDINTNYVGVAGSLTNPDYVLTPNAEGAVRGAGTAATRALADHFKRKGKISLVSSVISQPSAIVKKKVGF RFIEEL
Sequences:
>Translated_806_residues MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVASIPDKWNDRISSISIPHGLVVTVYEDVDFLG ASRSFEADVDLVSDKDLIYLNDNISAFKIKKAVCFYGESNFTGDSLCLSGDEQFDLYSGSYPERKQSHLVNPLNDDVYSI KIPPGMQTTVYEDDNYNGKHFVLTEDYTSDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWLDPR IKYRDILVDFQLSDTDDYSIKFFDEGLIKVKDYKLFFFDGNKKYGEGFLFNLDNKSSNLSFLLRFNGGFFQIQFVESLNN EIVYSSPLIGTLFDDVNSNVIFDINNIDANSPIVIDKMVLTVGKEHNRAERSTLGLATCWTIPILSIYNYIVQGHCNQAD KFVHNAADFFGSPADKILQIFGSSLPLPKKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE KILPHLRSRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAVADVETASRLVESVQAHVAEA TEVADIIHLKTAFDFSQLSYVNYLRHTEEEVIPPQSAQTLPLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVI SGVPEETNASRQVLLPIIEAWQHSYRQQELLFQSSEIPPESALARNEIEPLLEASRLTSEVATSWLRTSRDDFVYVVVRL EGEVISLTMAVDINTNYVGVAGSLTNPDYVLTPNAEGAVRGAGTAATRALADHFKRKGKISLVSSVISQPSAIVKKKVGF RFIEEL >Mature_806_residues MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVASIPDKWNDRISSISIPHGLVVTVYEDVDFLG ASRSFEADVDLVSDKDLIYLNDNISAFKIKKAVCFYGESNFTGDSLCLSGDEQFDLYSGSYPERKQSHLVNPLNDDVYSI KIPPGMQTTVYEDDNYNGKHFVLTEDYTSDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWLDPR IKYRDILVDFQLSDTDDYSIKFFDEGLIKVKDYKLFFFDGNKKYGEGFLFNLDNKSSNLSFLLRFNGGFFQIQFVESLNN EIVYSSPLIGTLFDDVNSNVIFDINNIDANSPIVIDKMVLTVGKEHNRAERSTLGLATCWTIPILSIYNYIVQGHCNQAD KFVHNAADFFGSPADKILQIFGSSLPLPKKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE KILPHLRSRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAVADVETASRLVESVQAHVAEA TEVADIIHLKTAFDFSQLSYVNYLRHTEEEVIPPQSAQTLPLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVI SGVPEETNASRQVLLPIIEAWQHSYRQQELLFQSSEIPPESALARNEIEPLLEASRLTSEVATSWLRTSRDDFVYVVVRL EGEVISLTMAVDINTNYVGVAGSLTNPDYVLTPNAEGAVRGAGTAATRALADHFKRKGKISLVSSVISQPSAIVKKKVGF RFIEEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90875; Mature: 90875
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS50915 CRYSTALLIN_BETA_GAMMA L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVASIPDKWNDRIS CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCEECCCCHHCCCHH SISIPHGLVVTVYEDVDFLGASRSFEADVDLVSDKDLIYLNDNISAFKIKKAVCFYGESN EECCCCCEEEEEEECCHHCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEEEEEEECCCC FTGDSLCLSGDEQFDLYSGSYPERKQSHLVNPLNDDVYSIKIPPGMQTTVYEDDNYNGKH CCCCEEEECCCCCEEECCCCCCCHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCE FVLTEDYTSDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWLDPR EEEECCCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHEEEEEECCCCEECCCC IKYRDILVDFQLSDTDDYSIKFFDEGLIKVKDYKLFFFDGNKKYGEGFLFNLDNKSSNLS EEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEEEEECCCEECCEEEEEECCCCCCEE FLLRFNGGFFQIQFVESLNNEIVYSSPLIGTLFDDVNSNVIFDINNIDANSPIVIDKMVL EEEEECCCEEEEEEHHHCCCCEEECCCCHHHHHHCCCCCEEEEEECCCCCCCEEEEHHHH TVGKEHNRAERSTLGLATCWTIPILSIYNYIVQGHCNQADKFVHNAADFFGSPADKILQI HHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH FGSSLPLPKKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCHHHHHHHHHHHH KILPHLRSRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCHH ADVETASRLVESVQAHVAEATEVADIIHLKTAFDFSQLSYVNYLRHTEEEVIPPQSAQTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHCCCCCCCCCC PLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVISGVPEETNASRQVLLPIIEA CCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEHEECCCCCCCCCCHHHHHHHHHH WQHSYRQQELLFQSSEIPPESALARNEIEPLLEASRLTSEVATSWLRTSRDDFVYVVVRL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE EGEVISLTMAVDINTNYVGVAGSLTNPDYVLTPNAEGAVRGAGTAATRALADHFKRKGKI CCCEEEEEEEEEECCCEEEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCH SLVSSVISQPSAIVKKKVGFRFIEEL HHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRYNRNHMLTLMFSLLIFDAYANEPKVCFYMDDDYNGESLCAAQGNSVASIPDKWNDRIS CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCEECCCCHHCCCHH SISIPHGLVVTVYEDVDFLGASRSFEADVDLVSDKDLIYLNDNISAFKIKKAVCFYGESN EECCCCCEEEEEEECCHHCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEEEEEEECCCC FTGDSLCLSGDEQFDLYSGSYPERKQSHLVNPLNDDVYSIKIPPGMQTTVYEDDNYNGKH CCCCEEEECCCCCEEECCCCCCCHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCE FVLTEDYTSDDLLIIRMNNKISSMRVSQDEDFICDRFCSIKKSIKFKIQKSFGSYWLDPR EEEECCCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHEEEEEECCCCEECCCC IKYRDILVDFQLSDTDDYSIKFFDEGLIKVKDYKLFFFDGNKKYGEGFLFNLDNKSSNLS EEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEEEEECCCEECCEEEEEECCCCCCEE FLLRFNGGFFQIQFVESLNNEIVYSSPLIGTLFDDVNSNVIFDINNIDANSPIVIDKMVL EEEEECCCEEEEEEHHHCCCCEEECCCCHHHHHHCCCCCEEEEEECCCCCCCEEEEHHHH TVGKEHNRAERSTLGLATCWTIPILSIYNYIVQGHCNQADKFVHNAADFFGSPADKILQI HHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH FGSSLPLPKKNSNETLDDESALINFMSDVKGTLTYITTNMGEHALTVPATALACKASMRE HCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCHHHHHHHHHHHH KILPHLRSRRDLAPGCIDWTLSILTDFTLLFGASIEYWNSKNFGRVIENIVREGEIGSAV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCCCHH ADVETASRLVESVQAHVAEATEVADIIHLKTAFDFSQLSYVNYLRHTEEEVIPPQSAQTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHCCCCCCCCCC PLGRYELALVDYHFIETVPRIRQDGRWVERPDLHFDIEVISGVPEETNASRQVLLPIIEA CCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEHEECCCCCCCCCCHHHHHHHHHH WQHSYRQQELLFQSSEIPPESALARNEIEPLLEASRLTSEVATSWLRTSRDDFVYVVVRL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE EGEVISLTMAVDINTNYVGVAGSLTNPDYVLTPNAEGAVRGAGTAATRALADHFKRKGKI CCCEEEEEEEEEECCCEEEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCH SLVSSVISQPSAIVKKKVGFRFIEEL HHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA