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The map label for this gene is yfgA

Identifier: 51597158

GI number: 51597158

Start: 3357719

End: 3358807

Strand: Reverse

Name: yfgA

Synonym: YPTB2842

Alternate gene names: 51597158

Gene position: 3358807-3357719 (Counterclockwise)

Preceding gene: 51597159

Following gene: 51597157

Centisome position: 70.79

GC content: 49.49

Gene sequence:

>1089_bases
ATGAATACTGAAGCCTCCCAAGATCAAACTGTTACAGAGACGCCAGGTGTGCGCCTGCGTCAAGCCCGCGAATCATTAGG
GCTAACCCAGCAGACTGTTGCAGAACGTCTGTGTCTGAAAGTATCCACAATCCGTGATATTGAGGAGGATAACGCGCAAG
CTAATCTCGCCTCGACATTCCACCGTGGCTACATTCGTTCTTACGCCAAGCTGGTTCATCTTCCTGAAGATGAGTTATTG
CCTATTTTGGAGAAACAAGCGCCAGTCAGAGCGGCGAAAGTTGCCCCAATGCAAAGTTTTTCATTGGGTAAAAAACACAA
AAAACGTGATGGCTGGTTGATGAGTTTCACCTGGCTTATTGTGTTGGTTGTGTTAGGTCTGACCGGAGCATGGTGGTGGC
AAAATCATCAGGCACAGCAAGCAGAGATTGCCAATATGGTTGATCAATCTTCTGCCCAACTGTCACAAAATGGCGGGCAA
CCAGTGCCGCTAACTGATGATAACAGCGATGCTATTGCGCCAACGGATGCCCCGGCACCGGTAGCCAATGGTCAGCCGGT
ACCACTGACAAATCATTCAACTTCGGCAGTAACTAATTCAGCTACAACCAGTTCAGCTACAACCAGTTCAGTTCCAACAA
CAAGTTCAGTTCCAAAAACAACTTTAGTTCCAAAAACAAATAGTACCGAACCTGTCGATACGGCGAATACAAATACCACA
ATGCATCAGGAGGGGGCTGCGTCAGCGGCCGTTTCCCCAAGTCAGGTACCGCAACCTGGTCTGTCCACAGGGCCATCGCC
ATTACCTACAGCAGACGCTGGGGTAAGTGGTAGCACGTCATCTGTGGGGGCGTTGGTGATGAATTTTACAGCAGATTGTT
GGTTGCAGGTTGTTGATGCAACGGGCAAGACGCTGTTTAGTGGTATTCAAAAAGGGGGCGCTGTCCTTAACCTGGCGGGT
AAAGCGCCCTATAAGCTGACTATCGGCGCACCAGGTGCTCTGACGATTTCGTATCAGGGTAACCCGGTAGATTTAAGTAA
GTTTATTAAGGCTAATCGCGTAGCCCGCCTGACTGTCGGTGTAGAGTAG

Upstream 100 bases:

>100_bases
TTCGCCGCGCTGGCAGGCCGTCAAGATAGTGTACAACGCTATGGCAAGCAGCTTGCGCGAAGTTTTCCACAATCCAAACA
GTACCAGCATTTTCTAGCTA

Downstream 100 bases:

>100_bases
AATGATGGTTTTGACAAGCACCCTTGTAGTTTTGGTAAACACTATGATGGTTTTGACAAATATCATGTTGTAAGAACTAC
ACGACCGTAAAGGAGAGTAT

Product: cytoskeletal protein RodZ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MNTEASQDQTVTETPGVRLRQARESLGLTQQTVAERLCLKVSTIRDIEEDNAQANLASTFHRGYIRSYAKLVHLPEDELL
PILEKQAPVRAAKVAPMQSFSLGKKHKKRDGWLMSFTWLIVLVVLGLTGAWWWQNHQAQQAEIANMVDQSSAQLSQNGGQ
PVPLTDDNSDAIAPTDAPAPVANGQPVPLTNHSTSAVTNSATTSSATTSSVPTTSSVPKTTLVPKTNSTEPVDTANTNTT
MHQEGAASAAVSPSQVPQPGLSTGPSPLPTADAGVSGSTSSVGALVMNFTADCWLQVVDATGKTLFSGIQKGGAVLNLAG
KAPYKLTIGAPGALTISYQGNPVDLSKFIKANRVARLTVGVE

Sequences:

>Translated_362_residues
MNTEASQDQTVTETPGVRLRQARESLGLTQQTVAERLCLKVSTIRDIEEDNAQANLASTFHRGYIRSYAKLVHLPEDELL
PILEKQAPVRAAKVAPMQSFSLGKKHKKRDGWLMSFTWLIVLVVLGLTGAWWWQNHQAQQAEIANMVDQSSAQLSQNGGQ
PVPLTDDNSDAIAPTDAPAPVANGQPVPLTNHSTSAVTNSATTSSATTSSVPTTSSVPKTTLVPKTNSTEPVDTANTNTT
MHQEGAASAAVSPSQVPQPGLSTGPSPLPTADAGVSGSTSSVGALVMNFTADCWLQVVDATGKTLFSGIQKGGAVLNLAG
KAPYKLTIGAPGALTISYQGNPVDLSKFIKANRVARLTVGVE
>Mature_362_residues
MNTEASQDQTVTETPGVRLRQARESLGLTQQTVAERLCLKVSTIRDIEEDNAQANLASTFHRGYIRSYAKLVHLPEDELL
PILEKQAPVRAAKVAPMQSFSLGKKHKKRDGWLMSFTWLIVLVVLGLTGAWWWQNHQAQQAEIANMVDQSSAQLSQNGGQ
PVPLTDDNSDAIAPTDAPAPVANGQPVPLTNHSTSAVTNSATTSSATTSSVPTTSSVPKTTLVPKTNSTEPVDTANTNTT
MHQEGAASAAVSPSQVPQPGLSTGPSPLPTADAGVSGSTSSVGALVMNFTADCWLQVVDATGKTLFSGIQKGGAVLNLAG
KAPYKLTIGAPGALTISYQGNPVDLSKFIKANRVARLTVGVE

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=372, Percent_Identity=55.3763440860215, Blast_Score=375, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 38058; Mature: 38058

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTEASQDQTVTETPGVRLRQARESLGLTQQTVAERLCLKVSTIRDIEEDNAQANLASTF
CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HRGYIRSYAKLVHLPEDELLPILEKQAPVRAAKVAPMQSFSLGKKHKKRDGWLMSFTWLI
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCHHHHCCHHHHHCCCCHHHHHHHH
VLVVLGLTGAWWWQNHQAQQAEIANMVDQSSAQLSQNGGQPVPLTDDNSDAIAPTDAPAP
HHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
VANGQPVPLTNHSTSAVTNSATTSSATTSSVPTTSSVPKTTLVPKTNSTEPVDTANTNTT
CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCE
MHQEGAASAAVSPSQVPQPGLSTGPSPLPTADAGVSGSTSSVGALVMNFTADCWLQVVDA
ECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TGKTLFSGIQKGGAVLNLAGKAPYKLTIGAPGALTISYQGNPVDLSKFIKANRVARLTVG
HHHHHHHHHHCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHCCEEEEEEE
VE
CC
>Mature Secondary Structure
MNTEASQDQTVTETPGVRLRQARESLGLTQQTVAERLCLKVSTIRDIEEDNAQANLASTF
CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
HRGYIRSYAKLVHLPEDELLPILEKQAPVRAAKVAPMQSFSLGKKHKKRDGWLMSFTWLI
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCCHHHHCCHHHHHCCCCHHHHHHHH
VLVVLGLTGAWWWQNHQAQQAEIANMVDQSSAQLSQNGGQPVPLTDDNSDAIAPTDAPAP
HHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
VANGQPVPLTNHSTSAVTNSATTSSATTSSVPTTSSVPKTTLVPKTNSTEPVDTANTNTT
CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCE
MHQEGAASAAVSPSQVPQPGLSTGPSPLPTADAGVSGSTSSVGALVMNFTADCWLQVVDA
ECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
TGKTLFSGIQKGGAVLNLAGKAPYKLTIGAPGALTISYQGNPVDLSKFIKANRVARLTVG
HHHHHHHHHHCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHCCEEEEEEE
VE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA