Click here to switch to the map view.

The map label for this gene is yegD [H]

Identifier: 51597122

GI number: 51597122

Start: 3313107

End: 3314462

Strand: Direct

Name: yegD [H]

Synonym: YPTB2806

Alternate gene names: 51597122

Gene position: 3313107-3314462 (Clockwise)

Preceding gene: 51597121

Following gene: 51597127

Centisome position: 69.83

GC content: 55.01

Gene sequence:

>1356_bases
TTGATGTTCATTGGATTTGACTACGGCACAGCAAACTGCTCAGTTGCCGTGATGCGGGATGATGCTCCCACGTTGTTGGC
GTTAGAAAATAACGACGTCTATTTACCGTCGATGTTGTGTGCACCCACACGCGAAGCCGTGAGTGAGTGTCTGCATCGTC
ACTGGCAAGTGCCAACGGGCAGCGACGAAAACCAACAACTCTTGCGTCGGGCCATCGCGTTCAATCGCGAAGAAGATATT
CCGGTAACCGCCGATAGCGTGCTGTTCGGCCTCTCCGCCCTTGCTCAATACATCGAAGACCCCGAAGAGGTTTACTTTGT
AAAGTCGCCAAAATCCTTTTTAGGCGCTAATGGCCTGAAACCTCAGCAATTGGCTCTGTTTGAAGATTTAGTCTGCGCCA
TGATGTTTCACATCAAGCGTCAGGCTGAATCCGTTTTAGCCGCAGAAATCCGTCAAACAGTCATTGGCCGCCCGGTAAAC
TTTCAGGGTTCCGGCGGCGAAGACGCTAACCGGCAGGCGGAAGGGATTTTATTACGTGCCGCACAACGTGCCGGTTTCCG
TGATATCGCCTTCCAGTTTGAACCCGTGGCTGCGGGGCTGGATTTCGAAGCGACATTAACGGAAGAAAAAACCGTCCTGG
TCGTGGATATCGGCGGGGGGACCACCGACTGTTCGGTCTTATTGATGGGGCCGAAGTGGCAAGGTTTGGCTGATCGCCAA
CAGAGCCTGCTGGGGCATAGCGGCTGCCGCGTTGGGGGTAACGATCTCGACATCATGCTGGCCTTCAAACAATTGATGCC
ACTGTTTGGGATGGGCGGTGAAACCGAGAAAGGGATTGCCATGCCGTCCCTGCCATATTGGAATGCGGTTGCCACCAATG
ATGTCCCGGCGCAAAGCGACTTCTACAGCACGGTTAATGGCCGTTTCCTGCGTGATCTCATCCGTGATGCCGCTAACCCA
CAGCACGTTGCACGGCTGCTGAAAGTGTATCAACAGCGCCTGAGCTACCGCTTGGTTCGCGCCGCAGAAGAGAGCAAAAT
TGCCCTGTCTGACCAAGAGCAGGTCGCTACAACATTGGATTTTGTTGAAGCCGAATTGGGCCAAATCATCAGCCAGCAAC
AACTGGCCGAAGCGATTAGTCCACCGCTACAACGCATTCAGGAGCAAGTCAGCCTGGCGCTGACCACCAGCAATGTCAAA
CCGGATGTTATTTACCTGACGGGTGGGAGCGCCCGCTCTCCGTTACTGCGTGCCGCGCTACAGCAACAATTGCCGGGGAT
CCCGTTGGTGGGGGGGAACGATTTCGGCTCGGTGACCGCCGGACTGGCCCGCTGGGCTCAAACCCTGTACCGATAA

Upstream 100 bases:

>100_bases
TCATCGGCGGCAGGTCGCGCCCTGATTTGGAGAGTGATCCACTTGCTCCCATGTTCACTCTAGGGTAAAGTCGCCCCCCT
TTATTTGGCCTGGGGAGCAA

Downstream 100 bases:

>100_bases
CCCCTATTATGTTCACCTCTCAGTGAGTTATCTCGCACTGAGAGTTTTTGTTGGCGTATCACTTGCAAGACTGCATGTGC
GGCGCGGCAACGAGAGTGGT

Product: chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MMFIGFDYGTANCSVAVMRDDAPTLLALENNDVYLPSMLCAPTREAVSECLHRHWQVPTGSDENQQLLRRAIAFNREEDI
PVTADSVLFGLSALAQYIEDPEEVYFVKSPKSFLGANGLKPQQLALFEDLVCAMMFHIKRQAESVLAAEIRQTVIGRPVN
FQGSGGEDANRQAEGILLRAAQRAGFRDIAFQFEPVAAGLDFEATLTEEKTVLVVDIGGGTTDCSVLLMGPKWQGLADRQ
QSLLGHSGCRVGGNDLDIMLAFKQLMPLFGMGGETEKGIAMPSLPYWNAVATNDVPAQSDFYSTVNGRFLRDLIRDAANP
QHVARLLKVYQQRLSYRLVRAAEESKIALSDQEQVATTLDFVEAELGQIISQQQLAEAISPPLQRIQEQVSLALTTSNVK
PDVIYLTGGSARSPLLRAALQQQLPGIPLVGGNDFGSVTAGLARWAQTLYR

Sequences:

>Translated_451_residues
MMFIGFDYGTANCSVAVMRDDAPTLLALENNDVYLPSMLCAPTREAVSECLHRHWQVPTGSDENQQLLRRAIAFNREEDI
PVTADSVLFGLSALAQYIEDPEEVYFVKSPKSFLGANGLKPQQLALFEDLVCAMMFHIKRQAESVLAAEIRQTVIGRPVN
FQGSGGEDANRQAEGILLRAAQRAGFRDIAFQFEPVAAGLDFEATLTEEKTVLVVDIGGGTTDCSVLLMGPKWQGLADRQ
QSLLGHSGCRVGGNDLDIMLAFKQLMPLFGMGGETEKGIAMPSLPYWNAVATNDVPAQSDFYSTVNGRFLRDLIRDAANP
QHVARLLKVYQQRLSYRLVRAAEESKIALSDQEQVATTLDFVEAELGQIISQQQLAEAISPPLQRIQEQVSLALTTSNVK
PDVIYLTGGSARSPLLRAALQQQLPGIPLVGGNDFGSVTAGLARWAQTLYR
>Mature_451_residues
MMFIGFDYGTANCSVAVMRDDAPTLLALENNDVYLPSMLCAPTREAVSECLHRHWQVPTGSDENQQLLRRAIAFNREEDI
PVTADSVLFGLSALAQYIEDPEEVYFVKSPKSFLGANGLKPQQLALFEDLVCAMMFHIKRQAESVLAAEIRQTVIGRPVN
FQGSGGEDANRQAEGILLRAAQRAGFRDIAFQFEPVAAGLDFEATLTEEKTVLVVDIGGGTTDCSVLLMGPKWQGLADRQ
QSLLGHSGCRVGGNDLDIMLAFKQLMPLFGMGGETEKGIAMPSLPYWNAVATNDVPAQSDFYSTVNGRFLRDLIRDAANP
QHVARLLKVYQQRLSYRLVRAAEESKIALSDQEQVATTLDFVEAELGQIISQQQLAEAISPPLQRIQEQVSLALTTSNVK
PDVIYLTGGSARSPLLRAALQQQLPGIPLVGGNDFGSVTAGLARWAQTLYR

Specific function: Unknown

COG id: COG0443

COG function: function code O; Molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heat shock protein 70 family [H]

Homologues:

Organism=Escherichia coli, GI87082035, Length=450, Percent_Identity=72.2222222222222, Blast_Score=675, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018181
- InterPro:   IPR001023
- InterPro:   IPR013126 [H]

Pfam domain/function: PF00012 HSP70 [H]

EC number: NA

Molecular weight: Translated: 49306; Mature: 49306

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00329 HSP70_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFIGFDYGTANCSVAVMRDDAPTLLALENNDVYLPSMLCAPTREAVSECLHRHWQVPTG
CEEEEEECCCCCEEEEEEECCCCEEEEECCCCEECCHHHHCCCHHHHHHHHHHHCCCCCC
SDENQQLLRRAIAFNREEDIPVTADSVLFGLSALAQYIEDPEEVYFVKSPKSFLGANGLK
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCC
PQQLALFEDLVCAMMFHIKRQAESVLAAEIRQTVIGRPVNFQGSGGEDANRQAEGILLRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
AQRAGFRDIAFQFEPVAAGLDFEATLTEEKTVLVVDIGGGTTDCSVLLMGPKWQGLADRQ
HHHCCCHHHHEEEEHHCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHH
QSLLGHSGCRVGGNDLDIMLAFKQLMPLFGMGGETEKGIAMPSLPYWNAVATNDVPAQSD
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCH
FYSTVNGRFLRDLIRDAANPQHVARLLKVYQQRLSYRLVRAAEESKIALSDQEQVATTLD
HHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHH
FVEAELGQIISQQQLAEAISPPLQRIQEQVSLALTTSNVKPDVIYLTGGSARSPLLRAAL
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEEECCCCCCEEEEECCCCCCHHHHHHH
QQQLPGIPLVGGNDFGSVTAGLARWAQTLYR
HHHCCCCEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMFIGFDYGTANCSVAVMRDDAPTLLALENNDVYLPSMLCAPTREAVSECLHRHWQVPTG
CEEEEEECCCCCEEEEEEECCCCEEEEECCCCEECCHHHHCCCHHHHHHHHHHHCCCCCC
SDENQQLLRRAIAFNREEDIPVTADSVLFGLSALAQYIEDPEEVYFVKSPKSFLGANGLK
CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCC
PQQLALFEDLVCAMMFHIKRQAESVLAAEIRQTVIGRPVNFQGSGGEDANRQAEGILLRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
AQRAGFRDIAFQFEPVAAGLDFEATLTEEKTVLVVDIGGGTTDCSVLLMGPKWQGLADRQ
HHHCCCHHHHEEEEHHCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHH
QSLLGHSGCRVGGNDLDIMLAFKQLMPLFGMGGETEKGIAMPSLPYWNAVATNDVPAQSD
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCH
FYSTVNGRFLRDLIRDAANPQHVARLLKVYQQRLSYRLVRAAEESKIALSDQEQVATTLD
HHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHH
FVEAELGQIISQQQLAEAISPPLQRIQEQVSLALTTSNVKPDVIYLTGGSARSPLLRAAL
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEEECCCCCCEEEEECCCCCCHHHHHHH
QQQLPGIPLVGGNDFGSVTAGLARWAQTLYR
HHHCCCCEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7940673; 7984428 [H]