| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51597088
Identifier: 51597088
GI number: 51597088
Start: 3276957
End: 3278045
Strand: Reverse
Name: 51597088
Synonym: YPTB2772
Alternate gene names: NA
Gene position: 3278045-3276957 (Counterclockwise)
Preceding gene: 51597094
Following gene: 51597087
Centisome position: 69.09
GC content: 47.66
Gene sequence:
>1089_bases ATGTTAAGGAAAATTAAAGTATTTATGTTCGCGATGGCGGCATTAACCACTCTTCCTGCATTCGCTCAACTTCCAAGCTA TTACCCCGCCGATTATCAGAAGATTGTGGATGGTGCAAAAAAAGAGGGCAAAGTGGTGGTCTATTCTGCGACGGATATTA AGGCGGCAGCCCCGTTGATTAAGGGATTCGAAGCGGCTTATCCGGGTATTAAAGTTGAATACAACGATATGAATAGCACG GAGTTATACAACCGCTACATCAGTGAGCAGGCATCGGGGAGCACCAGTGGCGATGTTGTGTGGAGTTCCTCCATGGATAC CGCACTCAAGTTGGCTACCGACTATGCGCTCGAATATCTCTCCCCTGAGCAGGCGGAGTTGCCGAAATGGGCAATATGGA AAAACAAAGCCTACGGCTCTACTTACGAACCCGTTGTCTTTATCTATAACAAGCGTCTGATCCCACAGGCCGATATGCCT GATACCCACATCGCACTGGCAAAACTCATCGTTAGCCAGCCTGATAAATTCAAAAGGAAAGTCACAACCTATGATATTGA AAAATCAGGCTTAGGGTTCATGTTGTCGGTACAGGATTTCAAGGCGGATCCGAATTACTTTACGACACTGGCTAATATCG CTAAAGGTGGTCTGACCGTGCAATCCTCCACCGGGACGATGATGGAACGGGTGTCATCCGGTGAAAATCTGATTGGTTTT AACATCCTCGGTTCTTACGCTGAAACCCGTGCCAAAACGGACCCTTCTCTTGGGATCGCCTACCCGAAGGATTACACACT GGTGCTATCGCGGGTGACCTTTATCAGCCAAAAGGCTCCCCACCAGAATGCAGCCAAGCTGTGGGTTGACTATCTGCTCT CAGAGAAAGGCCAAAATATTCTGGCCAATCAGTCAGATATTCCTTCTATCCGCAAAGATATTGACGGTAACAACGATATT GATGGTCTGACCAAAAAACTGGGCAGTGCGCTGAGACCCATCCCGGTTGATGAGAGCCTATTGGAATATATGGAACAGGC TAAACGTTTGGACTACATCAAACAGTGGCGTACCGCAGCAGCAAAATAG
Upstream 100 bases:
>100_bases TCACAAAATAGGAAGACAAAGAATTAACTTCGTTGCGCAGGAATAGACATTAACTATATGTTGATTTTTCGTTTCATAAA TGAGACCAGAGGTTAAATAT
Downstream 100 bases:
>100_bases TGGCTTTATCTGGGTGCGCTTGCCTTATGGGCATGCGCAGTCCTTGGTTTTATCGGCTTGATCATACATGGATCTTTAAC CAACAGGGCTCACTATGAAA
Product: ABC transporter, periplasmmic iron binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MLRKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDIKAAAPLIKGFEAAYPGIKVEYNDMNST ELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYALEYLSPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRLIPQADMP DTHIALAKLIVSQPDKFKRKVTTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSSGENLIGF NILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNILANQSDIPSIRKDIDGNNDI DGLTKKLGSALRPIPVDESLLEYMEQAKRLDYIKQWRTAAAK
Sequences:
>Translated_362_residues MLRKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDIKAAAPLIKGFEAAYPGIKVEYNDMNST ELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYALEYLSPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRLIPQADMP DTHIALAKLIVSQPDKFKRKVTTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSSGENLIGF NILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNILANQSDIPSIRKDIDGNNDI DGLTKKLGSALRPIPVDESLLEYMEQAKRLDYIKQWRTAAAK >Mature_362_residues MLRKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDIKAAAPLIKGFEAAYPGIKVEYNDMNST ELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYALEYLSPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRLIPQADMP DTHIALAKLIVSQPDKFKRKVTTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSSGENLIGF NILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNILANQSDIPSIRKDIDGNNDI DGLTKKLGSALRPIPVDESLLEYMEQAKRLDYIKQWRTAAAK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40220; Mature: 40220
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDIKAAAPLI CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEECCCCHHHHHHH KGFEAAYPGIKVEYNDMNSTELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYALEYL HHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHC SPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRLIPQADMPDTHIALAKLIVSQPDKFKRK CCCHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH VTTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSSGENLIGF HHEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCEEEH NILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNI HHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC LANQSDIPSIRKDIDGNNDIDGLTKKLGSALRPIPVDESLLEYMEQAKRLDYIKQWRTAA CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC AK CC >Mature Secondary Structure MLRKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDIKAAAPLI CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEECCCCHHHHHHH KGFEAAYPGIKVEYNDMNSTELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYALEYL HHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHC SPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRLIPQADMPDTHIALAKLIVSQPDKFKRK CCCHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH VTTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSSGENLIGF HHEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCEEEH NILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNI HHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC LANQSDIPSIRKDIDGNNDIDGLTKKLGSALRPIPVDESLLEYMEQAKRLDYIKQWRTAA CCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC AK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA