| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yciQ [H]
Identifier: 51596971
GI number: 51596971
Start: 3129988
End: 3132087
Strand: Direct
Name: yciQ [H]
Synonym: YPTB2652
Alternate gene names: 51596971
Gene position: 3129988-3132087 (Clockwise)
Preceding gene: 51596970
Following gene: 51596972
Centisome position: 65.97
GC content: 48.19
Gene sequence:
>2100_bases ATGTATTTTTTGAACTTGAAAATCCTGATGAAGCCAAATTACCACGGATGGAATAGCAGAATGGCACGCTTGTCTGGCAA GGCATTATACGTTATCTGGATCTTATTGTTACTTGTGACGGGAACCGTTCAGGCTACCGCCGATGAGATTTCCGTGAGTA CACCGGCTGTCGAAGCACCAAAGGGCCACGGCCTTATCCGTGCTTATGAACACATTCTATCGTTCGATACTCATGCGCGT TTTGACGCCGATGGCAGTATGGAGATGCGTGAGAATATTAAGGTGTTGTCCCTCGGGAAACAAATAAGCCGTGGGATTTT CCGTACGCTGCCGTTAACCTGGAACCGACAGGATGGCAAATTTTTCAGCGTCGAATATCAGATTAAAAATGTATTACGTG ATGGGGTGGCCGAACCTTTTAGTGTGACGAAAGAAGGCGAAACACTGATGGTCCGTATTGGTCGCGCTGACCATATATTG AAGCCCGGTATTTATAATTATGTGATCCAATACCAAGTCAGCAATCATTTCAGCCGATTCCCCGATTGGGATGAACTGTA TTGGAATGTGACAGGTAACGGCTGGGAATATCCTATTAGTAAAGCCAGTTTCCATCTGGAATTACCCGCAAGCGAAGCGT TTCTAAATAGCGAAGGCAAAGATACCCGGTTGAGCACGATTGATGTTTATACCGGCAGGCTCGGCGAAAAAGAGCAAAAT GCCAAAATTCTGGCCGATGGTAGCGTACAGACGTCGCAACCACTCAAACAAGGTGAAGGTTTGACCGTCGCCTATACTTG GCCGCGCACTATTCTTGCTAACGCACCTGCACCGGAAACCTCCTCACTGTTAGTCTATCTGCTGCTGCCTACCGTGCAAA CCAGCGTATTATGGATACCGATACTCCTCCTCATTGGCTATTACCTGCTTTGGTGGCGTAAAAATGTTACCGCGATTGGG CTGAAAATGCCGCCGATAGTGCCGCTCTATGCGCTCCCTGCCACGCTGTCACCGGGCTATCTGCGTTATGTCACTCAGCG TAAATACGATGCGATTGCCTTCAGTAGCGATTTGCTGAATTTAGTCGCTCAACGTAGCGTAGCCATTAAAACAAAAAAGA GTAAAAACAAAAGCCCATGGGTTTTAAACAGCCGCGATGAACAGTGGCTATCACTCCAATCCGATGGCAATCAGCTCGAT ATCCATGATAAGCAATTACTGCATACGCTGTTTAGTAGCAACCGTAAGAATATCAATCTCAGTAAGCCCCATCAGCGGCC AATGCAGAAGGCGCTGAAGTTTTTAGAGAAACGCTGTGAGGATCAGCAAGAGAAGTTATTCAGTCAATGGCTTGGGCCAA TATGGCGTGGAATATTTATCATGCTATTGGTGCCCGTTATCTGCGGCCTGCTATTCAATACGGGTATCGCCTTCATTACT ATTCCCGTTTTATTGTTGCTGCTATTGGGCATCAACCTCCTTTCTTTACCGCTGAAATTTTTATTTAGCCCCAAACAAGT ATTGGATAGCCGGGGGGTTCTCTCTGTATGCTTCGCGCTATTATTTGGCTTATTGGCTCTCCTTCCCGTTGGTCTTTTTA TCTTTAACCTCCCCCCCTTAACCCAGTTACCGGCTGGATACTTAGGCGCTTTATTGGTTGCTATTTTGCTCTGCGTTACT TTTACCAGGATGGTACCCCGTTACACACAACGAGGGCTAAATCATCTTGCTATCGCTCGCGGACTAAAATTATATCTTGG TACCGCAGAAAGGCATCGCTATCAGGCCCTTTATCCGCCGGACAAACTGGTTGCCCATTTTGAAAGTATGTTGCCTGTGG CTTTGGCTCTCGGCGTGGGTAAAACGTGGGCGAATAGTTTTGCACAATATTTGGTCAGCACAGGCACCCTGTCGGTGGTC TTTGCCAATGCCGACTGGAGCAGCGTGAGTCACTTCAGCCAATCCTGTAGCTCATCCGCTACGGCAACCCCTAGCCGCAG TTCTGACTCCAGTTCCAGCTCCAGTTCGAGTGGTTCAGGCTCCTCCGGCGGGGGTTCGTCTGGTGGTGGTTCTGGCGGTG GTGGTGGTGGTGGCTGGTAA
Upstream 100 bases:
>100_bases ATGGCACGTCGTTATTTTAATGGCACAGTACGGGACTTCAATATTCTGGTGGAGTCTTTCCCAAGCTTACTGTTAGCCCA TTTATTTAATTTTAAAGCAG
Downstream 100 bases:
>100_bases CGTTCGTCAGTCAGGGAAAAGATGGCGAATGTTCTGAATGAGAAGAATACTCATTAATTTTGTCTGTTATTGGGTATCAG TTCGATGTGTCCGTCACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MYFLNLKILMKPNYHGWNSRMARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAPKGHGLIRAYEHILSFDTHAR FDADGSMEMRENIKVLSLGKQISRGIFRTLPLTWNRQDGKFFSVEYQIKNVLRDGVAEPFSVTKEGETLMVRIGRADHIL KPGIYNYVIQYQVSNHFSRFPDWDELYWNVTGNGWEYPISKASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQN AKILADGSVQTSQPLKQGEGLTVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIPILLLIGYYLLWWRKNVTAIG LKMPPIVPLYALPATLSPGYLRYVTQRKYDAIAFSSDLLNLVAQRSVAIKTKKSKNKSPWVLNSRDEQWLSLQSDGNQLD IHDKQLLHTLFSSNRKNINLSKPHQRPMQKALKFLEKRCEDQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFIT IPVLLLLLLGINLLSLPLKFLFSPKQVLDSRGVLSVCFALLFGLLALLPVGLFIFNLPPLTQLPAGYLGALLVAILLCVT FTRMVPRYTQRGLNHLAIARGLKLYLGTAERHRYQALYPPDKLVAHFESMLPVALALGVGKTWANSFAQYLVSTGTLSVV FANADWSSVSHFSQSCSSSATATPSRSSDSSSSSSSSGSGSSGGGSSGGGSGGGGGGGW
Sequences:
>Translated_699_residues MYFLNLKILMKPNYHGWNSRMARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAPKGHGLIRAYEHILSFDTHAR FDADGSMEMRENIKVLSLGKQISRGIFRTLPLTWNRQDGKFFSVEYQIKNVLRDGVAEPFSVTKEGETLMVRIGRADHIL KPGIYNYVIQYQVSNHFSRFPDWDELYWNVTGNGWEYPISKASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQN AKILADGSVQTSQPLKQGEGLTVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIPILLLIGYYLLWWRKNVTAIG LKMPPIVPLYALPATLSPGYLRYVTQRKYDAIAFSSDLLNLVAQRSVAIKTKKSKNKSPWVLNSRDEQWLSLQSDGNQLD IHDKQLLHTLFSSNRKNINLSKPHQRPMQKALKFLEKRCEDQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFIT IPVLLLLLLGINLLSLPLKFLFSPKQVLDSRGVLSVCFALLFGLLALLPVGLFIFNLPPLTQLPAGYLGALLVAILLCVT FTRMVPRYTQRGLNHLAIARGLKLYLGTAERHRYQALYPPDKLVAHFESMLPVALALGVGKTWANSFAQYLVSTGTLSVV FANADWSSVSHFSQSCSSSATATPSRSSDSSSSSSSSGSGSSGGGSSGGGSGGGGGGGW >Mature_699_residues MYFLNLKILMKPNYHGWNSRMARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAPKGHGLIRAYEHILSFDTHAR FDADGSMEMRENIKVLSLGKQISRGIFRTLPLTWNRQDGKFFSVEYQIKNVLRDGVAEPFSVTKEGETLMVRIGRADHIL KPGIYNYVIQYQVSNHFSRFPDWDELYWNVTGNGWEYPISKASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQN AKILADGSVQTSQPLKQGEGLTVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIPILLLIGYYLLWWRKNVTAIG LKMPPIVPLYALPATLSPGYLRYVTQRKYDAIAFSSDLLNLVAQRSVAIKTKKSKNKSPWVLNSRDEQWLSLQSDGNQLD IHDKQLLHTLFSSNRKNINLSKPHQRPMQKALKFLEKRCEDQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFIT IPVLLLLLLGINLLSLPLKFLFSPKQVLDSRGVLSVCFALLFGLLALLPVGLFIFNLPPLTQLPAGYLGALLVAILLCVT FTRMVPRYTQRGLNHLAIARGLKLYLGTAERHRYQALYPPDKLVAHFESMLPVALALGVGKTWANSFAQYLVSTGTLSVV FANADWSSVSHFSQSCSSSATATPSRSSDSSSSSSSSGSGSSGGGSSGGGSGGGGGGGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787522, Length=577, Percent_Identity=27.7296360485269, Blast_Score=196, Evalue=5e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018702 [H]
Pfam domain/function: PF09972 DUF2207 [H]
EC number: NA
Molecular weight: Translated: 77319; Mature: 77319
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFLNLKILMKPNYHGWNSRMARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAP CEEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCHHHHCCCCCCCCCC KGHGLIRAYEHILSFDTHARFDADGSMEMRENIKVLSLGKQISRGIFRTLPLTWNRQDGK CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCC FFSVEYQIKNVLRDGVAEPFSVTKEGETLMVRIGRADHILKPGIYNYVIQYQVSNHFSRF EEEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHEEEEEEHHHHHHCC PDWDELYWNVTGNGWEYPISKASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQN CCHHHEEEEECCCCEECCCCCCEEEEECCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCC AKILADGSVQTSQPLKQGEGLTVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIP CEEEECCCCCCCCHHHCCCCEEEEEECCHHHCCCCCCCCCHHHEEEEEHHHHHHHHHHHH ILLLIGYYLLWWRKNVTAIGLKMPPIVPLYALPATLSPGYLRYVTQRKYDAIAFSSDLLN HHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LVAQRSVAIKTKKSKNKSPWVLNSRDEQWLSLQSDGNQLDIHDKQLLHTLFSSNRKNINL HHHHHHHEEEECCCCCCCCCEECCCCCHHEEECCCCCEECCHHHHHHHHHHHCCCCCCCC SKPHQRPMQKALKFLEKRCEDQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFIT CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH IPVLLLLLLGINLLSLPLKFLFSPKQVLDSRGVLSVCFALLFGLLALLPVGLFIFNLPPL HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH TQLPAGYLGALLVAILLCVTFTRMVPRYTQRGLNHLAIARGLKLYLGTAERHRYQALYPP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHEEECHHHCCEEECCCH DKLVAHFESMLPVALALGVGKTWANSFAQYLVSTGTLSVVFANADWSSVSHFSQSCSSSA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCC TATPSRSSDSSSSSSSSGSGSSGGGSSGGGSGGGGGGGW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYFLNLKILMKPNYHGWNSRMARLSGKALYVIWILLLLVTGTVQATADEISVSTPAVEAP CEEEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHCHHHHCCCCCCCCCC KGHGLIRAYEHILSFDTHARFDADGSMEMRENIKVLSLGKQISRGIFRTLPLTWNRQDGK CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCC FFSVEYQIKNVLRDGVAEPFSVTKEGETLMVRIGRADHILKPGIYNYVIQYQVSNHFSRF EEEEHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHEEEEEEHHHHHHCC PDWDELYWNVTGNGWEYPISKASFHLELPASEAFLNSEGKDTRLSTIDVYTGRLGEKEQN CCHHHEEEEECCCCEECCCCCCEEEEECCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCC AKILADGSVQTSQPLKQGEGLTVAYTWPRTILANAPAPETSSLLVYLLLPTVQTSVLWIP CEEEECCCCCCCCHHHCCCCEEEEEECCHHHCCCCCCCCCHHHEEEEEHHHHHHHHHHHH ILLLIGYYLLWWRKNVTAIGLKMPPIVPLYALPATLSPGYLRYVTQRKYDAIAFSSDLLN HHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LVAQRSVAIKTKKSKNKSPWVLNSRDEQWLSLQSDGNQLDIHDKQLLHTLFSSNRKNINL HHHHHHHEEEECCCCCCCCCEECCCCCHHEEECCCCCEECCHHHHHHHHHHHCCCCCCCC SKPHQRPMQKALKFLEKRCEDQQEKLFSQWLGPIWRGIFIMLLVPVICGLLFNTGIAFIT CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH IPVLLLLLLGINLLSLPLKFLFSPKQVLDSRGVLSVCFALLFGLLALLPVGLFIFNLPPL HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH TQLPAGYLGALLVAILLCVTFTRMVPRYTQRGLNHLAIARGLKLYLGTAERHRYQALYPP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHEEECHHHCCEEECCCH DKLVAHFESMLPVALALGVGKTWANSFAQYLVSTGTLSVVFANADWSSVSHFSQSCSSSA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCC TATPSRSSDSSSSSSSSGSGSSGGGSSGGGSGGGGGGGW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]