Click here to switch to the map view.

The map label for this gene is cvpA

Identifier: 51596932

GI number: 51596932

Start: 3088643

End: 3089152

Strand: Reverse

Name: cvpA

Synonym: YPTB2613

Alternate gene names: 51596932

Gene position: 3089152-3088643 (Counterclockwise)

Preceding gene: 51596933

Following gene: 51596931

Centisome position: 65.11

GC content: 44.71

Gene sequence:

>510_bases
ATGGTCTGGATTGATTACGTCATTATAGGAATTATCGGGTTTTCTGCGTTAGTCAGTTTAATTCGAGGGTTTGTCCGTGA
AGCATTGTCACTTGTAACATGGGGATGTGCGTTTTTTGTTGCCAGCCATTTTTACACTTACCTTGCTGTTTATTTCACCC
GATTTGAGGATGAAATTGTTCGCAACGGAATTGCCATCGGCATTTTGTTCATCGCGACATTGATCGTCGGGGCGATTGTC
AACTATGTGATTAGTTCACTGGTGGAGCGTACTGGGTTATCAGGAACCGATAGGGTGTTAGGGGTCTGTTTTGGGGCACT
GCGAGGTGTACTGATTGTCTCTGCCATGTTGTTCTTTCTGGATACGTTTACCGGCTTCTCACAGAGTGTTGATTGGAAGC
AGTCACAATTAATCCCGCAGTTCAGTTATATCATCAGGTGGTTCTTTGACTACCTGCAGAGCACGTCGAGTTTCTTACCG
AATCAATTACCGATTCGAAGCGGCTTATGA

Upstream 100 bases:

>100_bases
AATTTGTTTTGGGGTTAGAAACCCCTACGCAAACGTTTTCTTTTTCTGTTAGAATTCGCCGCGAACAAGATGCAGCGGCG
GTTTCGTTATTGGAATAGTC

Downstream 100 bases:

>100_bases
GGAAAAGACAACATGTGCGGTATTGTCGGTATCGCCGGTTTTACACCGGTAAACCAGTCGATTTATGATGCGTTGATGGT
GCTTCAGCATCGGGGTCAGG

Product: colicin V production protein

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MVWIDYVIIGIIGFSALVSLIRGFVREALSLVTWGCAFFVASHFYTYLAVYFTRFEDEIVRNGIAIGILFIATLIVGAIV
NYVISSLVERTGLSGTDRVLGVCFGALRGVLIVSAMLFFLDTFTGFSQSVDWKQSQLIPQFSYIIRWFFDYLQSTSSFLP
NQLPIRSGL

Sequences:

>Translated_169_residues
MVWIDYVIIGIIGFSALVSLIRGFVREALSLVTWGCAFFVASHFYTYLAVYFTRFEDEIVRNGIAIGILFIATLIVGAIV
NYVISSLVERTGLSGTDRVLGVCFGALRGVLIVSAMLFFLDTFTGFSQSVDWKQSQLIPQFSYIIRWFFDYLQSTSSFLP
NQLPIRSGL
>Mature_169_residues
MVWIDYVIIGIIGFSALVSLIRGFVREALSLVTWGCAFFVASHFYTYLAVYFTRFEDEIVRNGIAIGILFIATLIVGAIV
NYVISSLVERTGLSGTDRVLGVCFGALRGVLIVSAMLFFLDTFTGFSQSVDWKQSQLIPQFSYIIRWFFDYLQSTSSFLP
NQLPIRSGL

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=161, Percent_Identity=82.6086956521739, Blast_Score=270, Evalue=4e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 18954; Mature: 18954

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWIDYVIIGIIGFSALVSLIRGFVREALSLVTWGCAFFVASHFYTYLAVYFTRFEDEIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGIAIGILFIATLIVGAIVNYVISSLVERTGLSGTDRVLGVCFGALRGVLIVSAMLFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DTFTGFSQSVDWKQSQLIPQFSYIIRWFFDYLQSTSSFLPNQLPIRSGL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVWIDYVIIGIIGFSALVSLIRGFVREALSLVTWGCAFFVASHFYTYLAVYFTRFEDEIV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGIAIGILFIATLIVGAIVNYVISSLVERTGLSGTDRVLGVCFGALRGVLIVSAMLFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DTFTGFSQSVDWKQSQLIPQFSYIIRWFFDYLQSTSSFLPNQLPIRSGL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]