| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596893
Identifier: 51596893
GI number: 51596893
Start: 3045035
End: 3046303
Strand: Reverse
Name: 51596893
Synonym: YPTB2574
Alternate gene names: NA
Gene position: 3046303-3045035 (Counterclockwise)
Preceding gene: 51596894
Following gene: 51596888
Centisome position: 64.2
GC content: 40.35
Gene sequence:
>1269_bases ATGCCCAACATATCAGCGACAAACTATAACAGCACTATTCCATTTTCCTCAGAATTGGCATCAGATGGTAATGTTTTATA CCCATCAAGGGCCGATAGAAACTATATCGATCGGTTGGTTGAAAATCTTGACAAAAGTTTTTGTCAATATACGGGGAAAC ATGAGAATTTATCCTCTCAGCAAAGAGTACAACGTGATTTTTATAAAAATGATGATTTCACAGCTTATTTTTTGGAAAAG TCACAAAGCAGCGTTGCATTATGTTCACATATTGTCGAGCAAGCTTGGAGTAATCTGTATTCTCCGGTTTCGCATAAAAT AAATAATCAGCCAGAATACCGACTTGACGATTATCGGCGAGAGTCTCTTTGTCAGTTCGCTATCAGAAAAATGCTGAAAT CAGTAAATGAAGTCATAAACTCAACGGTCCAGAGCCAATTGATTTCACAGAATGGGGCAGTGAGAGCCGAGGCGATAAAA AACAAGCAAGAAAAATGTGAGGATGTCCTGTCGATGGTTTCCTATCTGTTGGGATTGACGACCAACAAAACAGGGGGGGC CAAGCAGCGCTATGGTTCAGACCCTATTAGGCAAGTGTTGTTTCAGGAGTTTCATACTAAGAACCTTTATGTTCAGCCAG GAGAATCACCTAGGAGAGTCTTGGACAGTACGATAAATAAACTTGCTGACGACTATTATCAGCTAAACAGTGGAAAAGAA AAGCTACCGAATGAGCAGATTATTAATCGGGTGATAAAAGAACTGCAAGATAGCATGGTTAACAATAGTTTAATGACGGA TAGCGCTGCATATCGCATTATATCTAAAACTATTATTGATCCGCTTCTCATGGCTGCTAATTATGAGGAATACCATCGTC ATGCTTATTTAAATGCGCTGGCCCGAACCTGGATTGAAAAAGACACGCCTATTGGTCACAATCAGAAATATAAACATTAT CTCGCTGCTAATTTACCCCGAAATAATAAATTTAGCCGATTATTCTTATTGGATAAGACCTTCGATATCCGCAAGAGTGA ACTTTATCAGCGAGTCGAGCAACATTTACGGGAGATCAATGAAAACATCTCTGCGGATGATATTCTCCGGTGCTGCAAAG ATTATTATGAATTTGCCCGTGAAAAGTATGCGCTGAAAATACCTTCTTTGGCTGAAGTTGAGTTTACGGAACAACTCACG CGCAGCGGCCATATCTCAGCAGCAATAGAACATCGGCGTCATGGTACGTATCTGCCCCGAACAGTATGA
Upstream 100 bases:
>100_bases AACCATGGATATCTGTCAGTAGGCTTGATAGTTAGAATATGTAGCTACCTGTTAGCCACGTAATCTTATCCGATATATTC GGATATCAAGGATGATAGTT
Downstream 100 bases:
>100_bases TCGGTGACTTAAGTTGTGTTAATGAAGAATAGCGGGTTGTGTCTGACGGCGAGACGGAGCCAATAAGGGGTTATTGGCAA GGTGCCCACGACGGAGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MPNISATNYNSTIPFSSELASDGNVLYPSRADRNYIDRLVENLDKSFCQYTGKHENLSSQQRVQRDFYKNDDFTAYFLEK SQSSVALCSHIVEQAWSNLYSPVSHKINNQPEYRLDDYRRESLCQFAIRKMLKSVNEVINSTVQSQLISQNGAVRAEAIK NKQEKCEDVLSMVSYLLGLTTNKTGGAKQRYGSDPIRQVLFQEFHTKNLYVQPGESPRRVLDSTINKLADDYYQLNSGKE KLPNEQIINRVIKELQDSMVNNSLMTDSAAYRIISKTIIDPLLMAANYEEYHRHAYLNALARTWIEKDTPIGHNQKYKHY LAANLPRNNKFSRLFLLDKTFDIRKSELYQRVEQHLREINENISADDILRCCKDYYEFAREKYALKIPSLAEVEFTEQLT RSGHISAAIEHRRHGTYLPRTV
Sequences:
>Translated_422_residues MPNISATNYNSTIPFSSELASDGNVLYPSRADRNYIDRLVENLDKSFCQYTGKHENLSSQQRVQRDFYKNDDFTAYFLEK SQSSVALCSHIVEQAWSNLYSPVSHKINNQPEYRLDDYRRESLCQFAIRKMLKSVNEVINSTVQSQLISQNGAVRAEAIK NKQEKCEDVLSMVSYLLGLTTNKTGGAKQRYGSDPIRQVLFQEFHTKNLYVQPGESPRRVLDSTINKLADDYYQLNSGKE KLPNEQIINRVIKELQDSMVNNSLMTDSAAYRIISKTIIDPLLMAANYEEYHRHAYLNALARTWIEKDTPIGHNQKYKHY LAANLPRNNKFSRLFLLDKTFDIRKSELYQRVEQHLREINENISADDILRCCKDYYEFAREKYALKIPSLAEVEFTEQLT RSGHISAAIEHRRHGTYLPRTV >Mature_421_residues PNISATNYNSTIPFSSELASDGNVLYPSRADRNYIDRLVENLDKSFCQYTGKHENLSSQQRVQRDFYKNDDFTAYFLEKS QSSVALCSHIVEQAWSNLYSPVSHKINNQPEYRLDDYRRESLCQFAIRKMLKSVNEVINSTVQSQLISQNGAVRAEAIKN KQEKCEDVLSMVSYLLGLTTNKTGGAKQRYGSDPIRQVLFQEFHTKNLYVQPGESPRRVLDSTINKLADDYYQLNSGKEK LPNEQIINRVIKELQDSMVNNSLMTDSAAYRIISKTIIDPLLMAANYEEYHRHAYLNALARTWIEKDTPIGHNQKYKHYL AANLPRNNKFSRLFLLDKTFDIRKSELYQRVEQHLREINENISADDILRCCKDYYEFAREKYALKIPSLAEVEFTEQLTR SGHISAAIEHRRHGTYLPRTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48972; Mature: 48840
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNISATNYNSTIPFSSELASDGNVLYPSRADRNYIDRLVENLDKSFCQYTGKHENLSSQ CCCCCCCCCCCCCCCHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH QRVQRDFYKNDDFTAYFLEKSQSSVALCSHIVEQAWSNLYSPVSHKINNQPEYRLDDYRR HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ESLCQFAIRKMLKSVNEVINSTVQSQLISQNGAVRAEAIKNKQEKCEDVLSMVSYLLGLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCC TNKTGGAKQRYGSDPIRQVLFQEFHTKNLYVQPGESPRRVLDSTINKLADDYYQLNSGKE CCCCCCCHHHCCCCHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHH KLPNEQIINRVIKELQDSMVNNSLMTDSAAYRIISKTIIDPLLMAANYEEYHRHAYLNAL HCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ARTWIEKDTPIGHNQKYKHYLAANLPRNNKFSRLFLLDKTFDIRKSELYQRVEQHLREIN HHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH ENISADDILRCCKDYYEFAREKYALKIPSLAEVEFTEQLTRSGHISAAIEHRRHGTYLPR CCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC TV CC >Mature Secondary Structure PNISATNYNSTIPFSSELASDGNVLYPSRADRNYIDRLVENLDKSFCQYTGKHENLSSQ CCCCCCCCCCCCCCHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH QRVQRDFYKNDDFTAYFLEKSQSSVALCSHIVEQAWSNLYSPVSHKINNQPEYRLDDYRR HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ESLCQFAIRKMLKSVNEVINSTVQSQLISQNGAVRAEAIKNKQEKCEDVLSMVSYLLGLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCC TNKTGGAKQRYGSDPIRQVLFQEFHTKNLYVQPGESPRRVLDSTINKLADDYYQLNSGKE CCCCCCCHHHCCCCHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHH KLPNEQIINRVIKELQDSMVNNSLMTDSAAYRIISKTIIDPLLMAANYEEYHRHAYLNAL HCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ARTWIEKDTPIGHNQKYKHYLAANLPRNNKFSRLFLLDKTFDIRKSELYQRVEQHLREIN HHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH ENISADDILRCCKDYYEFAREKYALKIPSLAEVEFTEQLTRSGHISAAIEHRRHGTYLPR CCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC TV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA