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The map label for this gene is yddW [H]

Identifier: 51596889

GI number: 51596889

Start: 3040769

End: 3042073

Strand: Direct

Name: yddW [H]

Synonym: YPTB2570

Alternate gene names: 51596889

Gene position: 3040769-3042073 (Clockwise)

Preceding gene: 51596873

Following gene: 51596890

Centisome position: 64.09

GC content: 51.03

Gene sequence:

>1305_bases
ATGTTGTTACATCTGAAAGGAAGCCACCGATTCATTAGCCTGATGCTCTGCGCATTATTACTCGCTGGCTGTGGACATCA
GCGGATGCCAGAGAAACCCGTGAGTCCGGTAGGGAAAGAAGAGCCGGTTCGTGGTGTCTGGCTAACCACCGTGCTCAGAC
TTGACTGGCCTTCACTTTCATCGATTAACGCTAGCTCAGACTCGATCAGGATCAGCACGCAAAAGAAAGAACTGACAGAC
ACATTAGATGACTTGGTGAAAAACGGCGTCAACACCCTTTTCTTTCAAGTAAAGCCTGATGGGAGCGCGCTTTATCATTC
AGCCATTCTTCCCTGGTCGGATGTTTTGACCGGTGTAACAGGTCAGGATCCCGGTTATGACCCTCTGGCCTTTGCGGTAT
CTGAAGCACATAAACGAGGGCTTAAGATACACGCGTGGCTGAACCCCTACCGTGTCTCAATGGATACCCGGCCGGAAACG
AGTGCATCACTTGAGCGCACGCTCTCTTCTTCGCCAGCCAGTGTCTACGCGCTGCATAAAGATTGGATACGCACCGCCAA
TGGCCGGTTTGTTCTCGATCCGGGGTTACCCGAGGTACGCCACTGGATCACCAATATTGTTGCCGAACTGGTCAAAAATT
ATGACATCGATGGCATACAGTTTGATGATTATTTCTATTATGAAACCCCGTCATCCCGGCTTGATGATGATGCCACATAC
CAGAAATATGGGCAGTCCTTCAGCGATAAGGCCAATTGGCGCAGGAACAATACGTTGTTGCTCATAAAACAGGTCTCTTC
AACCGTCAGGTCCCTTAAACCAGAGATTGAGTTTGGTGTCAGCCCGGCGGGCGTCTGGAGAAATCAGGCCGATGATCCCC
TAGGGTCAGAGACACAGGCAGGCAGCCCTTCTTACGATACCGCATATGCCGATACCCGTTTATGGGTGCAGGACGGTTTA
CTGGATTATATCGCACCACAACTCTACTGGACGCATAGCCAAAAAAAGGTCAAATATGACACGCTGGCAACATGGTGGGC
AGATACCGTCAGGCATAGCCACACCAAATTGTATATCGGCGTCGCGTTATACAAGGTTGGCCAACCCTCGCAGACCGAAC
CTGACTGGGTACTGGAAGGCGGTGTGCCTGAGCTAAAGAGGCAACTGGATCTCAATGACACGCTGCCGGAAATCAGCGGA
ACGATTCTGTTCAGGGAAGCGTTTCTCCGTCAGCCCCAGACGGAAGAGGCGGTGAAATATTTGAAGTCCAGGTGGCGTAA
CGGAAATCATAAAACGCAGCCATAG

Upstream 100 bases:

>100_bases
AAGAACCTGCTCAGAGCTATATCCCAACGGCCTCTGAGCCACAATACCCGTTAAAGGGGATCAATAAATTCTGCATCCCC
CCGCATTTAAGGAATAGGTC

Downstream 100 bases:

>100_bases
GCGGAGCCATTTTTAACCAAAAAATTTGGCTCCCCACATGCATCGGTCTGTAAAAACAATATTGATTAAAACCCAGTGTC
GTTATATTACGCTGGCGTTC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MLLHLKGSHRFISLMLCALLLAGCGHQRMPEKPVSPVGKEEPVRGVWLTTVLRLDWPSLSSINASSDSIRISTQKKELTD
TLDDLVKNGVNTLFFQVKPDGSALYHSAILPWSDVLTGVTGQDPGYDPLAFAVSEAHKRGLKIHAWLNPYRVSMDTRPET
SASLERTLSSSPASVYALHKDWIRTANGRFVLDPGLPEVRHWITNIVAELVKNYDIDGIQFDDYFYYETPSSRLDDDATY
QKYGQSFSDKANWRRNNTLLLIKQVSSTVRSLKPEIEFGVSPAGVWRNQADDPLGSETQAGSPSYDTAYADTRLWVQDGL
LDYIAPQLYWTHSQKKVKYDTLATWWADTVRHSHTKLYIGVALYKVGQPSQTEPDWVLEGGVPELKRQLDLNDTLPEISG
TILFREAFLRQPQTEEAVKYLKSRWRNGNHKTQP

Sequences:

>Translated_434_residues
MLLHLKGSHRFISLMLCALLLAGCGHQRMPEKPVSPVGKEEPVRGVWLTTVLRLDWPSLSSINASSDSIRISTQKKELTD
TLDDLVKNGVNTLFFQVKPDGSALYHSAILPWSDVLTGVTGQDPGYDPLAFAVSEAHKRGLKIHAWLNPYRVSMDTRPET
SASLERTLSSSPASVYALHKDWIRTANGRFVLDPGLPEVRHWITNIVAELVKNYDIDGIQFDDYFYYETPSSRLDDDATY
QKYGQSFSDKANWRRNNTLLLIKQVSSTVRSLKPEIEFGVSPAGVWRNQADDPLGSETQAGSPSYDTAYADTRLWVQDGL
LDYIAPQLYWTHSQKKVKYDTLATWWADTVRHSHTKLYIGVALYKVGQPSQTEPDWVLEGGVPELKRQLDLNDTLPEISG
TILFREAFLRQPQTEEAVKYLKSRWRNGNHKTQP
>Mature_434_residues
MLLHLKGSHRFISLMLCALLLAGCGHQRMPEKPVSPVGKEEPVRGVWLTTVLRLDWPSLSSINASSDSIRISTQKKELTD
TLDDLVKNGVNTLFFQVKPDGSALYHSAILPWSDVLTGVTGQDPGYDPLAFAVSEAHKRGLKIHAWLNPYRVSMDTRPET
SASLERTLSSSPASVYALHKDWIRTANGRFVLDPGLPEVRHWITNIVAELVKNYDIDGIQFDDYFYYETPSSRLDDDATY
QKYGQSFSDKANWRRNNTLLLIKQVSSTVRSLKPEIEFGVSPAGVWRNQADDPLGSETQAGSPSYDTAYADTRLWVQDGL
LDYIAPQLYWTHSQKKVKYDTLATWWADTVRHSHTKLYIGVALYKVGQPSQTEPDWVLEGGVPELKRQLDLNDTLPEISG
TILFREAFLRQPQTEEAVKYLKSRWRNGNHKTQP

Specific function: Unknown

COG id: COG1649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0748 family [H]

Homologues:

Organism=Escherichia coli, GI1787767, Length=393, Percent_Identity=61.8320610687023, Blast_Score=537, Evalue=1e-154,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003790
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF02638 DUF187 [H]

EC number: NA

Molecular weight: Translated: 49091; Mature: 49091

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLHLKGSHRFISLMLCALLLAGCGHQRMPEKPVSPVGKEEPVRGVWLTTVLRLDWPSLS
CEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
SINASSDSIRISTQKKELTDTLDDLVKNGVNTLFFQVKPDGSALYHSAILPWSDVLTGVT
CCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCHHHHHCCCC
GQDPGYDPLAFAVSEAHKRGLKIHAWLNPYRVSMDTRPETSASLERTLSSSPASVYALHK
CCCCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEHH
DWIRTANGRFVLDPGLPEVRHWITNIVAELVKNYDIDGIQFDDYFYYETPSSRLDDDATY
HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCCCHHH
QKYGQSFSDKANWRRNNTLLLIKQVSSTVRSLKPEIEFGVSPAGVWRNQADDPLGSETQA
HHHCCCCCHHCCCCCCCEEEEEHHHHHHHHHCCCCHHCCCCCHHHCCCCCCCCCCCCCCC
GSPSYDTAYADTRLWVQDGLLDYIAPQLYWTHSQKKVKYDTLATWWADTVRHSHTKLYIG
CCCCCCCCCCCCCHHHHHCHHHHHCCHHEEECCCCEEEHHHHHHHHHHHHHCCCCEEEEE
VALYKVGQPSQTEPDWVLEGGVPELKRQLDLNDTLPEISGTILFREAFLRQPQTEEAVKY
EEEEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
LKSRWRNGNHKTQP
HHHHCCCCCCCCCC
>Mature Secondary Structure
MLLHLKGSHRFISLMLCALLLAGCGHQRMPEKPVSPVGKEEPVRGVWLTTVLRLDWPSLS
CEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
SINASSDSIRISTQKKELTDTLDDLVKNGVNTLFFQVKPDGSALYHSAILPWSDVLTGVT
CCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHCCCHHHHHCCCC
GQDPGYDPLAFAVSEAHKRGLKIHAWLNPYRVSMDTRPETSASLERTLSSSPASVYALHK
CCCCCCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEHH
DWIRTANGRFVLDPGLPEVRHWITNIVAELVKNYDIDGIQFDDYFYYETPSSRLDDDATY
HHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCCCHHH
QKYGQSFSDKANWRRNNTLLLIKQVSSTVRSLKPEIEFGVSPAGVWRNQADDPLGSETQA
HHHCCCCCHHCCCCCCCEEEEEHHHHHHHHHCCCCHHCCCCCHHHCCCCCCCCCCCCCCC
GSPSYDTAYADTRLWVQDGLLDYIAPQLYWTHSQKKVKYDTLATWWADTVRHSHTKLYIG
CCCCCCCCCCCCCHHHHHCHHHHHCCHHEEECCCCEEEHHHHHHHHHHHHHCCCCEEEEE
VALYKVGQPSQTEPDWVLEGGVPELKRQLDLNDTLPEISGTILFREAFLRQPQTEEAVKY
EEEEECCCCCCCCCCEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH
LKSRWRNGNHKTQP
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]