| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596859
Identifier: 51596859
GI number: 51596859
Start: 3007784
End: 3008356
Strand: Reverse
Name: 51596859
Synonym: YPTB2540
Alternate gene names: NA
Gene position: 3008356-3007784 (Counterclockwise)
Preceding gene: 51596860
Following gene: 51596858
Centisome position: 63.4
GC content: 38.92
Gene sequence:
>573_bases ATGCCAGGTCGTATTCAACCAATGCTTCAATCATGGCTTACCGCTAGCAGACCCGCTGCAGAGAGTGTAAAACAACCATC AACGGGTTTAGTAAAAGACAGTAGTCTTAATAAAGACATAAAAACCGCAAGTACAGAGGCTTTTCTGGAAAAGGTAGATG CCTGGATGCTGGTTATTTGTGCCAGGAAAATGGACGGCGCTATTGTGGAAGAATGCATTAATGAATTAAGTAATAAAATG GATGCATTGTATAAAGAGCTATCCGATACCCGAAATCAGGTTTATAAACTTGTTCCCAATGATGGGCGGGGAGGTGGCCG AATAGCCCAGTTAAGAGAGGGATATGATGCAACCGATAGAGAACATTATTTAGAAAAATTGATTGCTTATAATCAGATTA AGCAGGTCATTAGTGATGAAATTGAGTATACACCTAAAAAATATGCTGATTCAATAGAGAGGATTGTTGATTTACACCAT TCGGGTTCTATTTATGGTGACTTAATGGCGCTGAATAAAAACAGTGATGTTCCTAATCTTGGTTATAACCTTGGTCGCAT TCAGTTTGGATAA
Upstream 100 bases:
>100_bases ATAAAAGAATATCCCCTAAAAATAATTAATACTCCTTATCAACATTGAACGTCCTTATTTTTCACCCAATAAGGGCTTAA CCACCACAAGGAGTTATTCT
Downstream 100 bases:
>100_bases AATACTTATCGTAAATAATTAGGTTTTTATTTTTAATCCTAGCCTATATTGACAGGTTATTGTTTTGGTAATCAGTTTAT TACCATGTTCAATAGCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MPGRIQPMLQSWLTASRPAAESVKQPSTGLVKDSSLNKDIKTASTEAFLEKVDAWMLVICARKMDGAIVEECINELSNKM DALYKELSDTRNQVYKLVPNDGRGGGRIAQLREGYDATDREHYLEKLIAYNQIKQVISDEIEYTPKKYADSIERIVDLHH SGSIYGDLMALNKNSDVPNLGYNLGRIQFG
Sequences:
>Translated_190_residues MPGRIQPMLQSWLTASRPAAESVKQPSTGLVKDSSLNKDIKTASTEAFLEKVDAWMLVICARKMDGAIVEECINELSNKM DALYKELSDTRNQVYKLVPNDGRGGGRIAQLREGYDATDREHYLEKLIAYNQIKQVISDEIEYTPKKYADSIERIVDLHH SGSIYGDLMALNKNSDVPNLGYNLGRIQFG >Mature_189_residues PGRIQPMLQSWLTASRPAAESVKQPSTGLVKDSSLNKDIKTASTEAFLEKVDAWMLVICARKMDGAIVEECINELSNKMD ALYKELSDTRNQVYKLVPNDGRGGGRIAQLREGYDATDREHYLEKLIAYNQIKQVISDEIEYTPKKYADSIERIVDLHHS GSIYGDLMALNKNSDVPNLGYNLGRIQFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21326; Mature: 21195
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRIQPMLQSWLTASRPAAESVKQPSTGLVKDSSLNKDIKTASTEAFLEKVDAWMLVIC CCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ARKMDGAIVEECINELSNKMDALYKELSDTRNQVYKLVPNDGRGGGRIAQLREGYDATDR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHCCCCCCHH EHYLEKLIAYNQIKQVISDEIEYTPKKYADSIERIVDLHHSGSIYGDLMALNKNSDVPNL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCCCCC GYNLGRIQFG CCCCCCCCCC >Mature Secondary Structure PGRIQPMLQSWLTASRPAAESVKQPSTGLVKDSSLNKDIKTASTEAFLEKVDAWMLVIC CCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ARKMDGAIVEECINELSNKMDALYKELSDTRNQVYKLVPNDGRGGGRIAQLREGYDATDR HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHCCCCCCHH EHYLEKLIAYNQIKQVISDEIEYTPKKYADSIERIVDLHHSGSIYGDLMALNKNSDVPNL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHEEECCCCCCCCC GYNLGRIQFG CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA