| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596834
Identifier: 51596834
GI number: 51596834
Start: 2968872
End: 2969987
Strand: Reverse
Name: 51596834
Synonym: YPTB2513
Alternate gene names: NA
Gene position: 2969987-2968872 (Counterclockwise)
Preceding gene: 51596835
Following gene: 51596833
Centisome position: 62.6
GC content: 43.1
Gene sequence:
>1116_bases ATGAAACATAAAAAATATTTACCCCTGTTTCTGATGGCAGGTATCTGTTCTGTTGCTCAAGCGGATAATTCTCCGGATGT GGTAAGCGCTAATAACATGGATAACCGGACTTTTTTTGCCGGTGACAAAATCAGAATAGTAAAAGATGGCGGTGAGACGA TAGAGGCTGTCGTAGAACTCAGCGATGATAATATTGGGATTGTGCGCATCCCTAAGGATGAAAAAGCCTATTTCCATGGC AACTGGTTGGCAGAATATAAAATAGAACATTTCCGCAATGAGGGGCGCAGTACTAACTCTCGGCCAGTGCATGAAATTGT CTTTGCTGATGGGCGCGTCAATTTTGGCGATACGGGCTGGAATACCGGTTTTTTACTCAAGCAAGTACGGTTTACCAGTG ACTCACGTAATGAGAGCAATCATAAAGTTGATTTCCGCATGGTAGAAATGGAAATCCGCCCTGCCTGGTCGAAAAGTATC GACAAGCACTGGTTTATGTTCGAAGGGATCTATTTAGGTAAAACAGGCTACGAAAAAAACCGCACGACAGGCGGCGATAA CAATATTGGCGGCGATGGTTATGGTTTTCGGCCCTATTACCGCTACCAGGTATCAGATCGCTTAAGTGTCAATACTGATG TAAAAATGCTGGTAGAAGATAAAGATGCCCGTGGTGCAGATAATGGGCGGTTCCAGTTCTACGAAGCACTTGTTAATGTA AATTATCGGGTCGCCGATAATGTGCACGCCGGTATCGAGGTGTTCCGTAAAGAAGGCCAGGACTTTAATCATAATGGCAC CAAAACAGCAAACGTCTTGGAACAGGAACTTCGCCCTTGGGTTGCCTGGAACATGGGTAAAAATAACTTCCTGTTTAAAA TGGAACCACAATTAAGACGTATCGGCGGGCAAGATGGTTATAGAGAAACCTCGAAAGCTCAAAAATATATTTTTAACTAT AGCTATCCTATCGCCGATAGAGTCTATTTGGTTGCCGAATATTTCTACCGGGTAGAGCATGACAAAAAATTCTGGGATCG TGGCGTACGCGACAATAAAAGCTACAGTGATACCACCACGCATTTTGGCAAGTTAGGAATTAATTATATTTTTTAA
Upstream 100 bases:
>100_bases TTTTTAACTCGATTTATAGAAAAAACCTAATATCAATTAGATTGGGTGGAGTTCCCATTATTTATCGATTGGGAATACCA CCTACTTACATGGAATGCAT
Downstream 100 bases:
>100_bases GCGGCTATAAATAACTAACTTAGAATAAGAGAAATAATATGAAACTACTAAATACCCTGGTTTGTATCATTGGTTTAACA TCATTTTCTTCCTCTGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVELSDDNIGIVRIPKDEKAYFHG NWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGWNTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSI DKHWFMFEGIYLGKTGYEKNRTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALVNV NYRVADNVHAGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRRIGGQDGYRETSKAQKYIFNY SYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTTHFGKLGINYIF
Sequences:
>Translated_371_residues MKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVELSDDNIGIVRIPKDEKAYFHG NWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGWNTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSI DKHWFMFEGIYLGKTGYEKNRTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALVNV NYRVADNVHAGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRRIGGQDGYRETSKAQKYIFNY SYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTTHFGKLGINYIF >Mature_371_residues MKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVELSDDNIGIVRIPKDEKAYFHG NWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGWNTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSI DKHWFMFEGIYLGKTGYEKNRTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALVNV NYRVADNVHAGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRRIGGQDGYRETSKAQKYIFNY SYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTTHFGKLGINYIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43046; Mature: 43046
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVEL CCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCEEEEEECCCCEEEEEEEE SDDNIGIVRIPKDEKAYFHGNWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGW CCCCEEEEEECCCCCEEEECCCCEEHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCC NTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSIDKHWFMFEGIYLGKTGYEKN CCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCHHCCCCCCEEEEEEEEECCCCCCCC RTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALVNV CCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCEEEEEECCCCCCCCCCCHHEEEHHHCC NYRVADNVHAGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRR CEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHH IGGQDGYRETSKAQKYIFNYSYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTT CCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHH HFGKLGINYIF HHHHCCEEECC >Mature Secondary Structure MKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVEL CCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCEEEEEECCCCEEEEEEEE SDDNIGIVRIPKDEKAYFHGNWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGW CCCCEEEEEECCCCCEEEECCCCEEHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCC NTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSIDKHWFMFEGIYLGKTGYEKN CCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCHHCCCCCCEEEEEEEEECCCCCCCC RTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALVNV CCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCEEEEEECCCCCCCCCCCHHEEEHHHCC NYRVADNVHAGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRR CEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHH IGGQDGYRETSKAQKYIFNYSYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTT CCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHH HFGKLGINYIF HHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA