| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596831
Identifier: 51596831
GI number: 51596831
Start: 2963088
End: 2964074
Strand: Reverse
Name: 51596831
Synonym: YPTB2510
Alternate gene names: NA
Gene position: 2964074-2963088 (Counterclockwise)
Preceding gene: 51596833
Following gene: 51596830
Centisome position: 62.47
GC content: 47.82
Gene sequence:
>987_bases TTGGCTATGGAAAACGCTATTCATTCCTCTGATTTGAAAACGATCCTGCATTCAAAACGATCCAATATTTACTATTTAGA ATATTGCCGCGTATTGGTTAATGGTGGGCGAGTTGAATATGTCACCGATGAAGGTAAACAATCCCTTTACTGGAATATCC CCATAGCGAACACCACCGTTATTATGCTGGGAACCGGGACTTCGGTGACTCAGGCTGCTATGCGTGAGTTTGCCCGAGCC GGGGTCTTAGTCGGTTTTTGTGGCGGGGGTGGGACGCCGCTTTTTGCGGCTAATGACGTAGAGGTCAATGTCTCGTGGCT CACTGCACAAAGCGAATACCGGCCAACCGAGTATCTGCACGATTGGGTCAGTTTCTGGTTCGATGATGAAAAAAGACTGG CAGCAGCAGTGGCTTTCCAGCGCATCAGGATCGCCCAAATTCAACAACATTGGCTCAGCAGCCACATACAGCGCGAATCT CTTTTTCCGGTTAATCACGATCAATTATTATTTATCCTCAGCCGTTTTGAGCAAAATTTAGCGAATTGTCTCACCAGTAA TGACCTTATGGTTCAGGAAGCGGTATTAACAAAGGCGCTCTATAAACTGGCTGCTAATACAGTGAATTACGGTGATTTCA CCCGCACTAAACGCGGTGGGGGCATCGATCTAGCTAATCGTTTTCTCGATCACGGAAATTATCTCGCCTATGGCTTAGCT GCGACGGCGACATGGGTTATTGGCTTACCCCATGGTCTGTCTGTTTTACACGGTAAGACCCGGCGTGGTGGTTTGGTCTT TGATGTGGCCGATTTAATTAAAGATGCGCTAGTGCTACCGCAGGCATTTATTGCCGCCATGCAGGGAGAAGAAGAGCAAG AATTTCGTCAGCGCTGCATTAGCGGGTTTCAACGAACCGAAGCGCTGGATGTGATGATTGATGGAATAAAAGAAACGGCA GCGTTATGTAGCCAGGTTCCGCGATGA
Upstream 100 bases:
>100_bases GAATTACTTTGGGTATAGAGAGAGTTATTTTTTGGAAGAATATCTGCTAATAAAGCGCTAACGGAAAAATAGCGCGGTGG ATATCCCGCTAAGGAGTTTT
Downstream 100 bases:
>100_bases ATATTTTACTGATATCCCAATGCCATAAACGGGCGCTTGATGAAACACGCCGTATTTTGGATCAGTTTGCTGAACGTAAA GGTGATCGGACATGGCAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MAMENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTVIMLGTGTSVTQAAMREFARA GVLVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRES LFPVNHDQLLFILSRFEQNLANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRTKRGGGIDLANRFLDHGNYLAYGLA ATATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCISGFQRTEALDVMIDGIKETA ALCSQVPR
Sequences:
>Translated_328_residues MAMENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTVIMLGTGTSVTQAAMREFARA GVLVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRES LFPVNHDQLLFILSRFEQNLANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRTKRGGGIDLANRFLDHGNYLAYGLA ATATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCISGFQRTEALDVMIDGIKETA ALCSQVPR >Mature_327_residues AMENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTVIMLGTGTSVTQAAMREFARAG VLVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRESL FPVNHDQLLFILSRFEQNLANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRTKRGGGIDLANRFLDHGNYLAYGLAA TATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCISGFQRTEALDVMIDGIKETAA LCSQVPR
Specific function: Unknown
COG id: COG1518
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36598; Mature: 36467
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTV CCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCEEE IMLGTGTSVTQAAMREFARAGVLVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLH EEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCEEEEEEEEECCCCCCCHHHHH DWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRESLFPVNHDQLLFILSRFEQNL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRTKRGGGIDLANRFLDHGNYLAYGLA HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEHHH ATATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCI HHHHEEEECCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SGFQRTEALDVMIDGIKETAALCSQVPR HHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AMENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLYWNIPIANTTV CCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCCEEE IMLGTGTSVTQAAMREFARAGVLVGFCGGGGTPLFAANDVEVNVSWLTAQSEYRPTEYLH EEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCEEEECCEEEEEEEEECCCCCCCHHHHH DWVSFWFDDEKRLAAAVAFQRIRIAQIQQHWLSSHIQRESLFPVNHDQLLFILSRFEQNL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ANCLTSNDLMVQEAVLTKALYKLAANTVNYGDFTRTKRGGGIDLANRFLDHGNYLAYGLA HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEHHH ATATWVIGLPHGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCI HHHHEEEECCCCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SGFQRTEALDVMIDGIKETAALCSQVPR HHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA