Click here to switch to the map view.

The map label for this gene is ypsI

Identifier: 51596820

GI number: 51596820

Start: 2949583

End: 2950227

Strand: Direct

Name: ypsI

Synonym: YPTB2499

Alternate gene names: 51596820

Gene position: 2949583-2950227 (Clockwise)

Preceding gene: 51596818

Following gene: 51596823

Centisome position: 62.17

GC content: 36.74

Gene sequence:

>645_bases
ATGTTAAAAGTATTTAACGTAAACTTTGACAGAATGTCAGAGAATAAATTAGATGAGATCTTTACACTTAGAAAAATAAC
ATTTAAAGATCGTTTGGACTGGAAAGTAACCTGTATTGATGGCAAGGAAAGTGATCAATATGATGATGAGAATACAAATT
ATTTATTAGGCACTATAGACGATACTCTCGTTTGCAGTGTTCGTTTTGTTGAAATGCAGTATCCAACCATGATTACGGGG
CCTTTTGCTCCTTACTTCCGTGATCTGGATTTACCTATTGATGGATTTATTGAGTCGAGCCGCTTTTTTGTCGAAAAAGC
GTTAGCTCGGGATAAATTAGGTAATAATGGTTCTCTCAGTGCAATACTTTTTCTCTCTATGGTCAATTACGCCAGAAACC
GTGGATACAAAGGTATATTGACTGTTGTTAGCAGAGGTATGTATACAATACTGAAACGCTCTGGGTGGGGTATTACTGTT
ATTAATCAAGGTGAATCGGAGAAAAATGAAGTTATCTATCTTTTACACTTGAGCATTGACAGTAATAGCCAACAGCAGTT
GATCAGGAAAATACAACGAGTGCACAATATTGATACTCATACACTTGCAAGCTGGCCGCTTGTTGTGCCCAGTATGACTA
AATAG

Upstream 100 bases:

>100_bases
CGCTATATTCATCTCATCACATAAAACACCTTCAACGTTTGTACTAACACTCTAAAATCATGTATGATATTGGTTTAATT
AAATAAATTTGGTTTTTATT

Downstream 100 bases:

>100_bases
GTTTGATCAATTGTAACTCAATGCCAAGTCTTATTGCATGTTTGGCATTGAGAACACCTAACTTCCTAACAATATTACCA
ATATGAAATTTCACTGTGCT

Product: N-acylhomoserine lactone synthase YpeI

Products: NA

Alternate protein names: Autoinducer synthesis protein yenI [H]

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MLKVFNVNFDRMSENKLDEIFTLRKITFKDRLDWKVTCIDGKESDQYDDENTNYLLGTIDDTLVCSVRFVEMQYPTMITG
PFAPYFRDLDLPIDGFIESSRFFVEKALARDKLGNNGSLSAILFLSMVNYARNRGYKGILTVVSRGMYTILKRSGWGITV
INQGESEKNEVIYLLHLSIDSNSQQQLIRKIQRVHNIDTHTLASWPLVVPSMTK

Sequences:

>Translated_214_residues
MLKVFNVNFDRMSENKLDEIFTLRKITFKDRLDWKVTCIDGKESDQYDDENTNYLLGTIDDTLVCSVRFVEMQYPTMITG
PFAPYFRDLDLPIDGFIESSRFFVEKALARDKLGNNGSLSAILFLSMVNYARNRGYKGILTVVSRGMYTILKRSGWGITV
INQGESEKNEVIYLLHLSIDSNSQQQLIRKIQRVHNIDTHTLASWPLVVPSMTK
>Mature_214_residues
MLKVFNVNFDRMSENKLDEIFTLRKITFKDRLDWKVTCIDGKESDQYDDENTNYLLGTIDDTLVCSVRFVEMQYPTMITG
PFAPYFRDLDLPIDGFIESSRFFVEKALARDKLGNNGSLSAILFLSMVNYARNRGYKGILTVVSRGMYTILKRSGWGITV
INQGESEKNEVIYLLHLSIDSNSQQQLIRKIQRVHNIDTHTLASWPLVVPSMTK

Specific function: Required for the synthesis of autoinducer molecules such as OHHL (N-(3-oxohexanoyl)-L-homoserine lactone), and HHL (N- hexanoyl-L-homoserine lactone) [H]

COG id: COG3916

COG function: function code TQ; N-acyl-L-homoserine lactone synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the autoinducer synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR001690
- InterPro:   IPR018311 [H]

Pfam domain/function: PF00765 Autoind_synth [H]

EC number: =2.3.1.184 [H]

Molecular weight: Translated: 24650; Mature: 24650

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00949 AUTOINDUCERS_SYNTH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKVFNVNFDRMSENKLDEIFTLRKITFKDRLDWKVTCIDGKESDQYDDENTNYLLGTID
CEEEEECCHHHCCCHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEECC
DTLVCSVRFVEMQYPTMITGPFAPYFRDLDLPIDGFIESSRFFVEKALARDKLGNNGSLS
CEEEEEEEEEEEECCEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AILFLSMVNYARNRGYKGILTVVSRGMYTILKRSGWGITVINQGESEKNEVIYLLHLSID
HHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEC
SNSQQQLIRKIQRVHNIDTHTLASWPLVVPSMTK
CCCHHHHHHHHHHHHCCCCHHCCCCCEECCCCCC
>Mature Secondary Structure
MLKVFNVNFDRMSENKLDEIFTLRKITFKDRLDWKVTCIDGKESDQYDDENTNYLLGTID
CEEEEECCHHHCCCHHHHHHHHHHHEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEECC
DTLVCSVRFVEMQYPTMITGPFAPYFRDLDLPIDGFIESSRFFVEKALARDKLGNNGSLS
CEEEEEEEEEEEECCEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AILFLSMVNYARNRGYKGILTVVSRGMYTILKRSGWGITVINQGESEKNEVIYLLHLSID
HHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEC
SNSQQQLIRKIQRVHNIDTHTLASWPLVVPSMTK
CCCHHHHHHHHHHHHCCCCHHCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7494483 [H]