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The map label for this gene is 51596782

Identifier: 51596782

GI number: 51596782

Start: 2905610

End: 2906083

Strand: Reverse

Name: 51596782

Synonym: YPTB2460

Alternate gene names: NA

Gene position: 2906083-2905610 (Counterclockwise)

Preceding gene: 51596785

Following gene: 51596781

Centisome position: 61.25

GC content: 53.8

Gene sequence:

>474_bases
ATGAGGACGCCACGCTGTTCCGGCGCAAGTATTATATTAACGGCAAGTCATGCCGGGGTGATTGTTTATCTGTCTGACGC
CATGCAGAGCGATACCAATGTGCAGGCGCTAAAGCGCCCCCTGACCGATGCCAGAGTGAAGGGGGCATTCAAAAACGTAT
TTGTGTACGCGGCAGGTGGGAAGAAAGACGGCCTGCAAATCATGCCTTTCAGTGAGATAACCACCAAAGATGAGTTTAAC
GGTATCAAGAACGTAACCCGCGATGATTTGCTGGCCGCACACCGCGTATCGCCACAGCTGATGGGGATCATGCCGACCAA
TACCAGCGGCTTTGGGGATGTCGAGAAGGTCGCGAAGGTGTTCGCCATTAACGAGCGGTACCCCATCATGGAAGGTCTGA
AAGCCCTGAATTACTGGCTCGGTGTCGAGGTATTCCGGTTCAACCCCTACGCACTGGCCGAAGTCAAAGCCTGA

Upstream 100 bases:

>100_bases
AATCTGGATCAGTATTGATTTGTGATTTACGAGAAAGAGGACTACGCCTTTGCGCCTCGCTCGGTGTTCCATCTAGCCGC
CATCCCGTCGGCGTTGCTCA

Downstream 100 bases:

>100_bases
ACCGCTGATTCATTCAATAATTTTCATCCACATCAGCACGGGCGCACCTTGCCACCCGTGGCATTCCTCGATCACGCGCT
GTGCGACCCATAGCGAGGCG

Product: capsid portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRTPRCSGASIILTASHAGVIVYLSDAMQSDTNVQALKRPLTDARVKGAFKNVFVYAAGGKKDGLQIMPFSEITTKDEFN
GIKNVTRDDLLAAHRVSPQLMGIMPTNTSGFGDVEKVAKVFAINERYPIMEGLKALNYWLGVEVFRFNPYALAEVKA

Sequences:

>Translated_157_residues
MRTPRCSGASIILTASHAGVIVYLSDAMQSDTNVQALKRPLTDARVKGAFKNVFVYAAGGKKDGLQIMPFSEITTKDEFN
GIKNVTRDDLLAAHRVSPQLMGIMPTNTSGFGDVEKVAKVFAINERYPIMEGLKALNYWLGVEVFRFNPYALAEVKA
>Mature_157_residues
MRTPRCSGASIILTASHAGVIVYLSDAMQSDTNVQALKRPLTDARVKGAFKNVFVYAAGGKKDGLQIMPFSEITTKDEFN
GIKNVTRDDLLAAHRVSPQLMGIMPTNTSGFGDVEKVAKVFAINERYPIMEGLKALNYWLGVEVFRFNPYALAEVKA

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 17215; Mature: 17215

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPRCSGASIILTASHAGVIVYLSDAMQSDTNVQALKRPLTDARVKGAFKNVFVYAAGG
CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHCCEEEEEEEEECC
KKDGLQIMPFSEITTKDEFNGIKNVTRDDLLAAHRVSPQLMGIMPTNTSGFGDVEKVAKV
CCCCEEEECCHHHCCCHHHCHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHH
FAINERYPIMEGLKALNYWLGVEVFRFNPYALAEVKA
HHCCCCCCHHHHHHHHHHHHCEEEEEECCEEEEEECC
>Mature Secondary Structure
MRTPRCSGASIILTASHAGVIVYLSDAMQSDTNVQALKRPLTDARVKGAFKNVFVYAAGG
CCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHCCEEEEEEEEECC
KKDGLQIMPFSEITTKDEFNGIKNVTRDDLLAAHRVSPQLMGIMPTNTSGFGDVEKVAKV
CCCCEEEECCHHHCCCHHHCHHHCCCHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHH
FAINERYPIMEGLKALNYWLGVEVFRFNPYALAEVKA
HHCCCCCCHHHHHHHHHHHHCEEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]