| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596780
Identifier: 51596780
GI number: 51596780
Start: 2902330
End: 2903445
Strand: Reverse
Name: 51596780
Synonym: YPTB2458
Alternate gene names: NA
Gene position: 2903445-2902330 (Counterclockwise)
Preceding gene: 51596781
Following gene: 51596779
Centisome position: 61.19
GC content: 30.82
Gene sequence:
>1116_bases ATGAAACTTGTTAGCTTATTTTTAAAAGGAAGGGCTGTAAGTGGCTTGGAGTCAGAGGTTCTCATTTTCGCAAAAGAAAT AACAGAGCTTTTTGGCCCTAATGGTAGTGGCAAAACACCGCTGTTACAATCAGTAGTTTATTGTCTGGGATATCCTTGTA AATTCCGCGATGATATTTATAACTTTTGTGAATATGCTCAGCTTGAATTTGAAATTTCTGGTGAGAAATATACATCTAGA CGAGATTTTAAGCAGAAAGAGTTCTATATTAGATTGGTTGGTTCCAATGGTCAGGTTGAACATTTTCATAATGAAATAAC TTACTCAAAATATATTATTGGATTATTGAAGCTTCCATATCCATCATTAGTTACTATTAAAAATGAACAAACACACCCAT ACCTGTCAACATTACTTCCTATATTCTATGTAGATCAAGATGATGGTTACTCCAGATATTATTCTGCACATAATAATTTT ATAAAAGATCAGTTTTCTGAAATGTTAAGAGTTATTTTTGGTTTGCCAGAAAGAAACTCGTTCATTTCAAAAAAAGAACT AATTGATGCTGAGGCACAATTAGAATACCTTGATAAGGTTTTGGTAGTTCAGCGTAGAGAAGTTGAACTAGCAAGAAGTG AAATAAATGTAAATAGAAAGCTAGAGGATATAGACTTAGCCATCTCTAATTTAAATAGAGAGTTAAGCGATTTAAAAGAT GATAGCAATAATAAAAATGATGCATTATCTAGCATGAATGTATTAATATCATCGCACAAAAAAAGAATCAGAATTTTAAA TGATGAGCTTGATGATATTAATCGACGGAAAATTAGTTTAGCTAAAATAAAAGATGAGATAAATATAGAGATAAATACGT TAAATATAAATGAGGAAGCCAAACGGGTATTCAGGTCATTCAAAGAGATATGTCCATCAGATGGATGTAAGATGTTTTCT CAAAGCTCAGAAAGTTATGGAAAGAATCTTCTATATTTGAGAGACCAAATAAAAGATATCGAGAGAAATATTGAGCTTGA TAGTCATTCTGTCGATAAAATAAAAAGTGAGTTAGACACGACTAAAAAAACTAATAGAAGAAATTCTAGAAATTAG
Upstream 100 bases:
>100_bases GGGCCATAGATTACGAGGGTGATTTATCCTATAACTTAGGGCAGGTTGAACGGTCTTATAGAAATTTCTGCGTAGATAAA AAATTAGATGGTGAACTTTT
Downstream 100 bases:
>100_bases AGATCAGATAGCAAAAAGTGAAGGGATATCATCAATTGTTGAAACAATATCCATTATAACTGCTAATATCTTTACTCTAC AGCTAGAAAAAAGTGAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MKLVSLFLKGRAVSGLESEVLIFAKEITELFGPNGSGKTPLLQSVVYCLGYPCKFRDDIYNFCEYAQLEFEISGEKYTSR RDFKQKEFYIRLVGSNGQVEHFHNEITYSKYIIGLLKLPYPSLVTIKNEQTHPYLSTLLPIFYVDQDDGYSRYYSAHNNF IKDQFSEMLRVIFGLPERNSFISKKELIDAEAQLEYLDKVLVVQRREVELARSEINVNRKLEDIDLAISNLNRELSDLKD DSNNKNDALSSMNVLISSHKKRIRILNDELDDINRRKISLAKIKDEINIEINTLNINEEAKRVFRSFKEICPSDGCKMFS QSSESYGKNLLYLRDQIKDIERNIELDSHSVDKIKSELDTTKKTNRRNSRN
Sequences:
>Translated_371_residues MKLVSLFLKGRAVSGLESEVLIFAKEITELFGPNGSGKTPLLQSVVYCLGYPCKFRDDIYNFCEYAQLEFEISGEKYTSR RDFKQKEFYIRLVGSNGQVEHFHNEITYSKYIIGLLKLPYPSLVTIKNEQTHPYLSTLLPIFYVDQDDGYSRYYSAHNNF IKDQFSEMLRVIFGLPERNSFISKKELIDAEAQLEYLDKVLVVQRREVELARSEINVNRKLEDIDLAISNLNRELSDLKD DSNNKNDALSSMNVLISSHKKRIRILNDELDDINRRKISLAKIKDEINIEINTLNINEEAKRVFRSFKEICPSDGCKMFS QSSESYGKNLLYLRDQIKDIERNIELDSHSVDKIKSELDTTKKTNRRNSRN >Mature_371_residues MKLVSLFLKGRAVSGLESEVLIFAKEITELFGPNGSGKTPLLQSVVYCLGYPCKFRDDIYNFCEYAQLEFEISGEKYTSR RDFKQKEFYIRLVGSNGQVEHFHNEITYSKYIIGLLKLPYPSLVTIKNEQTHPYLSTLLPIFYVDQDDGYSRYYSAHNNF IKDQFSEMLRVIFGLPERNSFISKKELIDAEAQLEYLDKVLVVQRREVELARSEINVNRKLEDIDLAISNLNRELSDLKD DSNNKNDALSSMNVLISSHKKRIRILNDELDDINRRKISLAKIKDEINIEINTLNINEEAKRVFRSFKEICPSDGCKMFS QSSESYGKNLLYLRDQIKDIERNIELDSHSVDKIKSELDTTKKTNRRNSRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43167; Mature: 43167
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVSLFLKGRAVSGLESEVLIFAKEITELFGPNGSGKTPLLQSVVYCLGYPCKFRDDIY CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHH NFCEYAQLEFEISGEKYTSRRDFKQKEFYIRLVGSNGQVEHFHNEITYSKYIIGLLKLPY HHHHHHEEEEEECCCHHCCHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC PSLVTIKNEQTHPYLSTLLPIFYVDQDDGYSRYYSAHNNFIKDQFSEMLRVIFGLPERNS CCEEEEECCCCCHHHHHHCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC FISKKELIDAEAQLEYLDKVLVVQRREVELARSEINVNRKLEDIDLAISNLNRELSDLKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC DSNNKNDALSSMNVLISSHKKRIRILNDELDDINRRKISLAKIKDEINIEINTLNINEEA CCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCHHH KRVFRSFKEICPSDGCKMFSQSSESYGKNLLYLRDQIKDIERNIELDSHSVDKIKSELDT HHHHHHHHHHCCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH TKKTNRRNSRN HHHHCCCCCCC >Mature Secondary Structure MKLVSLFLKGRAVSGLESEVLIFAKEITELFGPNGSGKTPLLQSVVYCLGYPCKFRDDIY CHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHH NFCEYAQLEFEISGEKYTSRRDFKQKEFYIRLVGSNGQVEHFHNEITYSKYIIGLLKLPY HHHHHHEEEEEECCCHHCCHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC PSLVTIKNEQTHPYLSTLLPIFYVDQDDGYSRYYSAHNNFIKDQFSEMLRVIFGLPERNS CCEEEEECCCCCHHHHHHCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC FISKKELIDAEAQLEYLDKVLVVQRREVELARSEINVNRKLEDIDLAISNLNRELSDLKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC DSNNKNDALSSMNVLISSHKKRIRILNDELDDINRRKISLAKIKDEINIEINTLNINEEA CCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCHHH KRVFRSFKEICPSDGCKMFSQSSESYGKNLLYLRDQIKDIERNIELDSHSVDKIKSELDT HHHHHHHHHHCCCCCHHHHHCCCHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH TKKTNRRNSRN HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA