| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596768
Identifier: 51596768
GI number: 51596768
Start: 2892513
End: 2893217
Strand: Reverse
Name: 51596768
Synonym: YPTB2446
Alternate gene names: NA
Gene position: 2893217-2892513 (Counterclockwise)
Preceding gene: 51596769
Following gene: 51596767
Centisome position: 60.98
GC content: 40.43
Gene sequence:
>705_bases GTGAGTGGACGTAATGAAATTATTGATGGCCATTTAGCGCGAATTTCAACGCATGGATTAGTATATACTGAGGTTCTGGG GTGGATAGATTTAGGCCATGCACAGGGAGACGATATCAGGAACATTCTCCGACAAATGAGTGCTGGAGAGTCTTCGAATA GCAAGCGAAACTTGGGAGATTATTATGATGTAAAATATTCACAAGGAATGCTAGGGATGAAAAGGAAAGTTTCTATTTCC CGAATGATCAAATGGCGAATAAAGAGAGGAAGGCATCTTCACGAGAGATACAGTATAGCTCTCGCGATGATGATGAGGGT GGCACGGCAATTTGAGTCTATGCAAGCATCATTCCCTTTCAATTTAGTGACTGATAGTGGTTTTAGCGGAGAAGATTTAG TATCTGACCTGTTGGGTTTTTATCGAGTTTTTTCCATCCCAAGTCCGTTCGAGATATTGCGCCCAGTGAGCAAAGAAGAA GCGTTAAAACGTTGGGATTACTACGGTCCCATAGGTTCGTATAAAAATGAAAATTTTCTGTCATTGTTATTCCCAGATCC AGAAAAATTTCGTAATAGCAAACCCCGTTTGGGATATCTTCCATCATTTATGCAAACAGTAATACCTTACAATAATTTCA AATCGGGAAATGTGGGGATTGCCTCACAAGATGGTGTTGAAGTTGATACCCATTTCTTAGGATAG
Upstream 100 bases:
>100_bases TTGTTTCCTCTTCTTAATAATATTAAGAAAAGAGATGATAAATATCTGCAAAGAACGTTGTAATGGAATAAATTATATTT TTTAAAAAAGGGAAAATACA
Downstream 100 bases:
>100_bases TCGTACAATGAAAAAAGTAGCTATAATTTTTATCGTGTTAATATTAATTGTGGCATTGCCAATGATATATTTTTGGCCGA CGATAAAAGTATTAACGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSGRNEIIDGHLARISTHGLVYTEVLGWIDLGHAQGDDIRNILRQMSAGESSNSKRNLGDYYDVKYSQGMLGMKRKVSIS RMIKWRIKRGRHLHERYSIALAMMMRVARQFESMQASFPFNLVTDSGFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEE ALKRWDYYGPIGSYKNENFLSLLFPDPEKFRNSKPRLGYLPSFMQTVIPYNNFKSGNVGIASQDGVEVDTHFLG
Sequences:
>Translated_234_residues MSGRNEIIDGHLARISTHGLVYTEVLGWIDLGHAQGDDIRNILRQMSAGESSNSKRNLGDYYDVKYSQGMLGMKRKVSIS RMIKWRIKRGRHLHERYSIALAMMMRVARQFESMQASFPFNLVTDSGFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEE ALKRWDYYGPIGSYKNENFLSLLFPDPEKFRNSKPRLGYLPSFMQTVIPYNNFKSGNVGIASQDGVEVDTHFLG >Mature_233_residues SGRNEIIDGHLARISTHGLVYTEVLGWIDLGHAQGDDIRNILRQMSAGESSNSKRNLGDYYDVKYSQGMLGMKRKVSISR MIKWRIKRGRHLHERYSIALAMMMRVARQFESMQASFPFNLVTDSGFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEEA LKRWDYYGPIGSYKNENFLSLLFPDPEKFRNSKPRLGYLPSFMQTVIPYNNFKSGNVGIASQDGVEVDTHFLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26734; Mature: 26603
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRNEIIDGHLARISTHGLVYTEVLGWIDLGHAQGDDIRNILRQMSAGESSNSKRNLGD CCCCCCHHCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC YYDVKYSQGMLGMKRKVSISRMIKWRIKRGRHLHERYSIALAMMMRVARQFESMQASFPF HHCCHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE NLVTDSGFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEEALKRWDYYGPIGSYKNENFL EEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEE SLLFPDPEKFRNSKPRLGYLPSFMQTVIPYNNFKSGNVGIASQDGVEVDTHFLG EEECCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGRNEIIDGHLARISTHGLVYTEVLGWIDLGHAQGDDIRNILRQMSAGESSNSKRNLGD CCCCCHHCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC YYDVKYSQGMLGMKRKVSISRMIKWRIKRGRHLHERYSIALAMMMRVARQFESMQASFPF HHCCHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE NLVTDSGFSGEDLVSDLLGFYRVFSIPSPFEILRPVSKEEALKRWDYYGPIGSYKNENFL EEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEE SLLFPDPEKFRNSKPRLGYLPSFMQTVIPYNNFKSGNVGIASQDGVEVDTHFLG EEECCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA