| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is 51596755
Identifier: 51596755
GI number: 51596755
Start: 2876355
End: 2876978
Strand: Direct
Name: 51596755
Synonym: YPTB2433
Alternate gene names: NA
Gene position: 2876355-2876978 (Clockwise)
Preceding gene: 51596754
Following gene: 51596756
Centisome position: 60.62
GC content: 44.07
Gene sequence:
>624_bases ATGTTGAAACAATCCCTATTATCCCTTGCCCTGATGGGTTCCTGTAGTGTCGCCATGGCAGATAACTACACTTATGTCGC TGGTGGTTTGCAGTTCGGTTCAATCAATAGCAACTCACGCTTTGATCAACAGTTTGACCGACAAAATTATAGCCATATTG GCAATAAAAATATGGGTGGGATTTATCTTAACGGCGGTTATAGCTTTGATAACTCGCTCTTCATTGATGGCCGACTTAGC AGCCTTGCCAATGATAACCGTGGTAGTGCAGATGCCGTTCTTGGATTAGGCTATTATTTTGCTTTTACTCCGGATATTGA TTTCTACACCGTCGTGGGTGCCAGCCGCCATGCATTAGTATTTGATGCCAGCAAAGACGGTAAAAAAACCAATACTTATA ACAGTGCTAGCGGTGAAATTGGGGTTAAAACCAAACTATCACCAGATATTGGCGTGAACATCGCCTATCGTCTGGCAAAT TATGATAAACGCGCATTTCATGAAGCGCGGATCATGGCAGATTATGCTCTGACACAAAAACTGGCCGCTGAAGTCGGTTA TACCTACCATAACTGGCGAGTCAGTGACCAAGCGATGCAAGTCGGCCTACGGTATAACTTCTAA
Upstream 100 bases:
>100_bases CACTAACCTTCGCTGTTCATCCACTGTTTACCCGCTGTTTAACGGCTGTCATTGATAATGCTCACAATTTCAAAAGGACG TTACAATCACAGGAGCTGTT
Downstream 100 bases:
>100_bases TATCGTTACAGCGCTTAAATGGCTACCACATTTAAATTGTTACAACATTTAAATTGTTGCAACGTTTACATTGTGACGGC GTCTAAGTTTTTATAGCGCG
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MLKQSLLSLALMGSCSVAMADNYTYVAGGLQFGSINSNSRFDQQFDRQNYSHIGNKNMGGIYLNGGYSFDNSLFIDGRLS SLANDNRGSADAVLGLGYYFAFTPDIDFYTVVGASRHALVFDASKDGKKTNTYNSASGEIGVKTKLSPDIGVNIAYRLAN YDKRAFHEARIMADYALTQKLAAEVGYTYHNWRVSDQAMQVGLRYNF
Sequences:
>Translated_207_residues MLKQSLLSLALMGSCSVAMADNYTYVAGGLQFGSINSNSRFDQQFDRQNYSHIGNKNMGGIYLNGGYSFDNSLFIDGRLS SLANDNRGSADAVLGLGYYFAFTPDIDFYTVVGASRHALVFDASKDGKKTNTYNSASGEIGVKTKLSPDIGVNIAYRLAN YDKRAFHEARIMADYALTQKLAAEVGYTYHNWRVSDQAMQVGLRYNF >Mature_207_residues MLKQSLLSLALMGSCSVAMADNYTYVAGGLQFGSINSNSRFDQQFDRQNYSHIGNKNMGGIYLNGGYSFDNSLFIDGRLS SLANDNRGSADAVLGLGYYFAFTPDIDFYTVVGASRHALVFDASKDGKKTNTYNSASGEIGVKTKLSPDIGVNIAYRLAN YDKRAFHEARIMADYALTQKLAAEVGYTYHNWRVSDQAMQVGLRYNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22827; Mature: 22827
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKQSLLSLALMGSCSVAMADNYTYVAGGLQFGSINSNSRFDQQFDRQNYSHIGNKNMGG CCHHHHHHHHHHCCCEEEEECCEEEEECCEEECCCCCCCCHHHHHHHCHHHHCCCCCCCE IYLNGGYSFDNSLFIDGRLSSLANDNRGSADAVLGLGYYFAFTPDIDFYTVVGASRHALV EEEECCCCCCCCEEECCCHHHHCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCEEEE FDASKDGKKTNTYNSASGEIGVKTKLSPDIGVNIAYRLANYDKRAFHEARIMADYALTQK EECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH LAAEVGYTYHNWRVSDQAMQVGLRYNF HHHHHCCEEECEEECHHHHEEEEEECC >Mature Secondary Structure MLKQSLLSLALMGSCSVAMADNYTYVAGGLQFGSINSNSRFDQQFDRQNYSHIGNKNMGG CCHHHHHHHHHHCCCEEEEECCEEEEECCEEECCCCCCCCHHHHHHHCHHHHCCCCCCCE IYLNGGYSFDNSLFIDGRLSSLANDNRGSADAVLGLGYYFAFTPDIDFYTVVGASRHALV EEEECCCCCCCCEEECCCHHHHCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCEEEE FDASKDGKKTNTYNSASGEIGVKTKLSPDIGVNIAYRLANYDKRAFHEARIMADYALTQK EECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH LAAEVGYTYHNWRVSDQAMQVGLRYNF HHHHHCCEEECEEECHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA