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The map label for this gene is tap

Identifier: 51596723

GI number: 51596723

Start: 2831185

End: 2832795

Strand: Reverse

Name: tap

Synonym: YPTB2400

Alternate gene names: 51596723

Gene position: 2832795-2831185 (Counterclockwise)

Preceding gene: 51596724

Following gene: 51596722

Centisome position: 59.7

GC content: 50.65

Gene sequence:

>1611_bases
ATGTTTGGTCAAATCCGGATTTCTACCAGTTTTTTCCTGCTGCTGATGTTTCTTTGCGCCATACAGTTAATTTCAAGTGG
TCTATCATTTACGGCTTTTCGCTCAGACTACCAAAATTTAAATCGAGTGGAGTTAAGTAGTCAGCAACGCGATGCATTAA
GCCTCAGTTGGGTATCTTTGCTTCAGGCACGTAATACCTTAAACCGTGCGGCTACTCGCTCGGCGCTCAATGTTCCTCAG
GAGCAAGTTAACGCTTTAATGGGGAGTGCGCGCAGTGCATTGCAGAAAGCTGAACTTTACTTTAATCAGTTTCAGGCGGT
ACCGCGCCTTGATGAGAGTGAGAGCAGTGGTCAATTACTGGATGCGACCAAAAACAGTTATCAAAACCTTCGTAGCGCAT
TACGTGAGTTAATTGATTTTCTGGAAGCGGGTGATTTACAAGCATTTATGGATCAACCCACTCAGAAAACGCAAGATTTG
TTTGAAGCGGATTTCATCCAGTATTTGCAATACGCCAATGAGGTTATTGCCGATGCCGGTCAGCAGAATCAGCAGGCTTA
TCAGCTCTCAATCTGGATATTTAGTGGTGCGATTTTGATGGTTATCACGATGGCCATTTCGTCGTTGATCTGGTTGCGCA
ACATGTTTGTTCGGCCATTAGCGACGATGCGTGAGCATTTTGGCCGCATTGCTCAAGGGGATTTGTCTGGGCAGATCTCG
GTGACTGGCCGTAATGAAATCAGCCAGATGTTCGCCAGCTTATGCACCATGCAGCAGTCGCTGATCTCAACGGTCAGCAA
TGTGCGTGAGGGTACCGAATCGATGTTGACCGGTATCCAGGAAATTTCCGCAGGTAACAACGATTTATCGGCAAGAACTG
AACAGCAAGCGGCTTCCTTGGAACAAACTGCCGCGAGTATGGAACAACTGACCGCCACGGTAAAACAGAATGCGGACAAT
GCGCATCAGGCCACGGTACTGGCGCAAGAGGCTTCCGGTACGGCAGCTAAAGGCGGAGAACTGACGGCGAGTGTCGTCAC
CACCATGCATGCAATCGCTACCAGTTCGCAGAAGATTGGTGCGATCACCAGCGTTATCGACGGTATTGCCTTCCAAACCA
ATATTTTGGCACTGAATGCGGCCGTGGAGGCGGCCCGTGCGGGTGAGCAAGGGCGTGGTTTTGCGGTGGTTGCGGGTGAA
GTCCGTAATTTAGCACAACGCAGTGCGCAAGCAGCCAAAGAGATCAAAGGGCTGATTGATGAGTCCGTCAGCCGTGTCCG
CCAGGGGTCTACGCTGGTCGAAAGTGCAGGAACTACCATGGAAGAGATTGTCCGCTCGGTGGCGCGTGTGACTGACATTA
TGGGGGAGATCGAATCTGCTTCGGATGAACAGAGCCGGGGTATTGAACAAATATCACTCGCCGTAACGCAAATGGATCAG
GTTACTCAGCAAAATGCGTCATTAGTGGAAGAGGCCGCGGCGGCAGCCAATGCACTGGAAGAGCAGGCCAGCCTGCTCTC
CGATGCCGTCTCTGTTTTCCGTTTGGGGCAGGGGCACGACGAACAGTCAGTTGCGGGCAATAGCCAGCAATCATTGGCCA
CGCATTATTAG

Upstream 100 bases:

>100_bases
ATCCGCCTGCTGGCCATTTACCTGCCACGCCAATTGATTTGGGTGTATGCAAAATAATATTAATAAAGTCGGCCTATGAG
CCGGCTGAGAAGAGGTTACG

Downstream 100 bases:

>100_bases
TCGCTCATTATGGGTCGATCAGCATGAGTGGTTCCGACCAGGAGTGACAATCGATCATCACTCGTAACGGGTCATCACGA
GTAACGACAAGTGGCTGTAA

Product: methyl-accepting chemotaxis protein IV (MCP-IV) (dipeptide ch...

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MFGQIRISTSFFLLLMFLCAIQLISSGLSFTAFRSDYQNLNRVELSSQQRDALSLSWVSLLQARNTLNRAATRSALNVPQ
EQVNALMGSARSALQKAELYFNQFQAVPRLDESESSGQLLDATKNSYQNLRSALRELIDFLEAGDLQAFMDQPTQKTQDL
FEADFIQYLQYANEVIADAGQQNQQAYQLSIWIFSGAILMVITMAISSLIWLRNMFVRPLATMREHFGRIAQGDLSGQIS
VTGRNEISQMFASLCTMQQSLISTVSNVREGTESMLTGIQEISAGNNDLSARTEQQAASLEQTAASMEQLTATVKQNADN
AHQATVLAQEASGTAAKGGELTASVVTTMHAIATSSQKIGAITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRNLAQRSAQAAKEIKGLIDESVSRVRQGSTLVESAGTTMEEIVRSVARVTDIMGEIESASDEQSRGIEQISLAVTQMDQ
VTQQNASLVEEAAAAANALEEQASLLSDAVSVFRLGQGHDEQSVAGNSQQSLATHY

Sequences:

>Translated_536_residues
MFGQIRISTSFFLLLMFLCAIQLISSGLSFTAFRSDYQNLNRVELSSQQRDALSLSWVSLLQARNTLNRAATRSALNVPQ
EQVNALMGSARSALQKAELYFNQFQAVPRLDESESSGQLLDATKNSYQNLRSALRELIDFLEAGDLQAFMDQPTQKTQDL
FEADFIQYLQYANEVIADAGQQNQQAYQLSIWIFSGAILMVITMAISSLIWLRNMFVRPLATMREHFGRIAQGDLSGQIS
VTGRNEISQMFASLCTMQQSLISTVSNVREGTESMLTGIQEISAGNNDLSARTEQQAASLEQTAASMEQLTATVKQNADN
AHQATVLAQEASGTAAKGGELTASVVTTMHAIATSSQKIGAITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRNLAQRSAQAAKEIKGLIDESVSRVRQGSTLVESAGTTMEEIVRSVARVTDIMGEIESASDEQSRGIEQISLAVTQMDQ
VTQQNASLVEEAAAAANALEEQASLLSDAVSVFRLGQGHDEQSVAGNSQQSLATHY
>Mature_536_residues
MFGQIRISTSFFLLLMFLCAIQLISSGLSFTAFRSDYQNLNRVELSSQQRDALSLSWVSLLQARNTLNRAATRSALNVPQ
EQVNALMGSARSALQKAELYFNQFQAVPRLDESESSGQLLDATKNSYQNLRSALRELIDFLEAGDLQAFMDQPTQKTQDL
FEADFIQYLQYANEVIADAGQQNQQAYQLSIWIFSGAILMVITMAISSLIWLRNMFVRPLATMREHFGRIAQGDLSGQIS
VTGRNEISQMFASLCTMQQSLISTVSNVREGTESMLTGIQEISAGNNDLSARTEQQAASLEQTAASMEQLTATVKQNADN
AHQATVLAQEASGTAAKGGELTASVVTTMHAIATSSQKIGAITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE
VRNLAQRSAQAAKEIKGLIDESVSRVRQGSTLVESAGTTMEEIVRSVARVTDIMGEIESASDEQSRGIEQISLAVTQMDQ
VTQQNASLVEEAAAAANALEEQASLLSDAVSVFRLGQGHDEQSVAGNSQQSLATHY

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=518, Percent_Identity=56.5637065637066, Blast_Score=516, Evalue=1e-147,
Organism=Escherichia coli, GI2367378, Length=529, Percent_Identity=53.875236294896, Blast_Score=469, Evalue=1e-133,
Organism=Escherichia coli, GI1788195, Length=518, Percent_Identity=51.5444015444015, Blast_Score=450, Evalue=1e-127,
Organism=Escherichia coli, GI1787690, Length=431, Percent_Identity=50.3480278422274, Blast_Score=366, Evalue=1e-102,
Organism=Escherichia coli, GI1789453, Length=337, Percent_Identity=41.2462908011869, Blast_Score=224, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57879; Mature: 57879

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS50885 HAMP ; PS00538 CHEMOTAXIS_TRANSDUC_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGQIRISTSFFLLLMFLCAIQLISSGLSFTAFRSDYQNLNRVELSSQQRDALSLSWVSL
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHH
LQARNTLNRAATRSALNVPQEQVNALMGSARSALQKAELYFNQFQAVPRLDESESSGQLL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
DATKNSYQNLRSALRELIDFLEAGDLQAFMDQPTQKTQDLFEADFIQYLQYANEVIADAG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
QQNQQAYQLSIWIFSGAILMVITMAISSLIWLRNMFVRPLATMREHFGRIAQGDLSGQIS
CCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEEE
VTGRNEISQMFASLCTMQQSLISTVSNVREGTESMLTGIQEISAGNNDLSARTEQQAASL
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EQTAASMEQLTATVKQNADNAHQATVLAQEASGTAAKGGELTASVVTTMHAIATSSQKIG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
AITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLID
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
ESVSRVRQGSTLVESAGTTMEEIVRSVARVTDIMGEIESASDEQSRGIEQISLAVTQMDQ
HHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHH
VTQQNASLVEEAAAAANALEEQASLLSDAVSVFRLGQGHDEQSVAGNSQQSLATHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHCCC
>Mature Secondary Structure
MFGQIRISTSFFLLLMFLCAIQLISSGLSFTAFRSDYQNLNRVELSSQQRDALSLSWVSL
CCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHH
LQARNTLNRAATRSALNVPQEQVNALMGSARSALQKAELYFNQFQAVPRLDESESSGQLL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
DATKNSYQNLRSALRELIDFLEAGDLQAFMDQPTQKTQDLFEADFIQYLQYANEVIADAG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
QQNQQAYQLSIWIFSGAILMVITMAISSLIWLRNMFVRPLATMREHFGRIAQGDLSGQIS
CCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEEE
VTGRNEISQMFASLCTMQQSLISTVSNVREGTESMLTGIQEISAGNNDLSARTEQQAASL
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
EQTAASMEQLTATVKQNADNAHQATVLAQEASGTAAKGGELTASVVTTMHAIATSSQKIG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
AITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLID
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
ESVSRVRQGSTLVESAGTTMEEIVRSVARVTDIMGEIESASDEQSRGIEQISLAVTQMDQ
HHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHH
VTQQNASLVEEAAAAANALEEQASLLSDAVSVFRLGQGHDEQSVAGNSQQSLATHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]