| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596707
Identifier: 51596707
GI number: 51596707
Start: 2810488
End: 2811045
Strand: Direct
Name: 51596707
Synonym: YPTB2383
Alternate gene names: NA
Gene position: 2810488-2811045 (Clockwise)
Preceding gene: 51596706
Following gene: 51596708
Centisome position: 59.23
GC content: 46.24
Gene sequence:
>558_bases ATGATAAGTCTTTTTTCTCCATGTCACCTCAGTGCCGCTTTACTTATCTCAGCACTGTTTATCGTACCTACCAACGCAGC ACCCTCACCCGTATCTAGCCCTTTTACTGTCAACGCTACCGTGCTAACTGGATGTGTTCTGGGGGGAGGCGCAACTGACA GCTCCAATTTTGGTTCCATAAATTTTGGCAATATTACTTCGCTGGCAACCGCCATTAATGCAACTTCTGGGCTGAATGCA GGAACCATTACCATTCAGTGTAATGGTAATCCTAGCGTAACACTTGCGCTCAATTCAGGGGCCAACATGACGGGTAACAT CTCCGCGGGTAGGCACCTGCTTAACAGCAGTACCGGTGAATACTTGCTGTATCAAATTTATCAAAATAGCCCCCGAACCC TTATCTGGGTAGATGGTTCAAATGGGGGGGCAACACAAGTCATTGCTACCGACGGCACGCTACAGCAAGTTATTTTATAT GCACAACTGTTTGCCAGTAATACACAACCTACTGCGGGAGTTTATCTAGATACGTTATTGGTTACTGTCACTTACTGA
Upstream 100 bases:
>100_bases TTTATGGCCTGGTTCCTGCACAATCGACGCCTGCGGTAGGGACCTATACTGATACCGTTCAGGTCACGGTGAGTTGGTAA GTATAGAGGGAGGGCTAACA
Downstream 100 bases:
>100_bases TCAATAACACATACCGGAGAAAAACTTACGATGATAAAATATCACTTATTATCTAAATTGATATTATCCTTTATTTTGCT ACCCATCGCCCCTCTACATG
Product: hypothetical protein
Products: NA
Alternate protein names: Spore Coat U Domain Protein
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MISLFSPCHLSAALLISALFIVPTNAAPSPVSSPFTVNATVLTGCVLGGGATDSSNFGSINFGNITSLATAINATSGLNA GTITIQCNGNPSVTLALNSGANMTGNISAGRHLLNSSTGEYLLYQIYQNSPRTLIWVDGSNGGATQVIATDGTLQQVILY AQLFASNTQPTAGVYLDTLLVTVTY
Sequences:
>Translated_185_residues MISLFSPCHLSAALLISALFIVPTNAAPSPVSSPFTVNATVLTGCVLGGGATDSSNFGSINFGNITSLATAINATSGLNA GTITIQCNGNPSVTLALNSGANMTGNISAGRHLLNSSTGEYLLYQIYQNSPRTLIWVDGSNGGATQVIATDGTLQQVILY AQLFASNTQPTAGVYLDTLLVTVTY >Mature_185_residues MISLFSPCHLSAALLISALFIVPTNAAPSPVSSPFTVNATVLTGCVLGGGATDSSNFGSINFGNITSLATAINATSGLNA GTITIQCNGNPSVTLALNSGANMTGNISAGRHLLNSSTGEYLLYQIYQNSPRTLIWVDGSNGGATQVIATDGTLQQVILY AQLFASNTQPTAGVYLDTLLVTVTY
Specific function: Unknown
COG id: COG5430
COG function: function code S; Uncharacterized secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18936; Mature: 18936
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: PS00221 MIP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLFSPCHLSAALLISALFIVPTNAAPSPVSSPFTVNATVLTGCVLGGGATDSSNFGSI CCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEHHEEEEEEECCCCCCCCCCCCE NFGNITSLATAINATSGLNAGTITIQCNGNPSVTLALNSGANMTGNISAGRHLLNSSTGE ECCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCEEECHHHHHHHHCCCCCC YLLYQIYQNSPRTLIWVDGSNGGATQVIATDGTLQQVILYAQLFASNTQPTAGVYLDTLL EEEEEEECCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHEEEEEE VTVTY EEEEC >Mature Secondary Structure MISLFSPCHLSAALLISALFIVPTNAAPSPVSSPFTVNATVLTGCVLGGGATDSSNFGSI CCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEHHEEEEEEECCCCCCCCCCCCE NFGNITSLATAINATSGLNAGTITIQCNGNPSVTLALNSGANMTGNISAGRHLLNSSTGE ECCCHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCEEECHHHHHHHHCCCCCC YLLYQIYQNSPRTLIWVDGSNGGATQVIATDGTLQQVILYAQLFASNTQPTAGVYLDTLL EEEEEEECCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHEEEEEE VTVTY EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA