| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yebQ [H]
Identifier: 51596693
GI number: 51596693
Start: 2791758
End: 2793125
Strand: Direct
Name: yebQ [H]
Synonym: YPTB2369
Alternate gene names: 51596693
Gene position: 2791758-2793125 (Clockwise)
Preceding gene: 51596689
Following gene: 51596703
Centisome position: 58.84
GC content: 51.17
Gene sequence:
>1368_bases ATGAACCCATCAACAAGTGATGGCTTACCTGTACCTCAACGCTATGCCGCGATACTGGTTATTGCTTTAGGTATTATGAT GGCGGTATTGGACGGCACTATTGCCAACGTGGCATTACCGACTATCGCACGTGACCTCAATACCAGCCCAGCGACATCTA TCTGGGTTGTCAATGCTTATCAGCTCGCCATCACCATCTCACTGCTTTCCATGGCGTCATTGGGCGATATCATTGGTTAC CGGCGGGTTTATCAAGCTGGCTTACTGATATTCAGCGTGACCTCACTGTTTTGTGCTCTGTCCGATTCGTTATGGACCCT GACGTTTGCCCGTGTGCTACAAGGGTTTGGCGCGGCGGCATTGATGAGCGTCAATACCGCCCTGATTCGTATCATTTATC CTCGAGCCCAACTTGGTCGAGGTATTGGTATCAATACCTTGATTGTTGCTGTGTCTTCAGCCGCGGGGCCCAGTATTGCC GCTGCCGTGTTGTCTGTCGCCTCTTGGCAATGGCTGTTCGCCCTCAACGTGCCAATTGGGCTATTAGCGTGGTGTTTAGG TATAAAATTCCTACCCGCCAATAATACGAAAAGCAACGGCAATCGCTTTGATATCACCAGTTGTGTTCTGAATGCGCTGA CATTTGGCTTATTGATCATCGCAATCAGTGGTTTTTCCCAAGGGCAAAGCCCGGCAGTGATTGCTGCTCAAGTGGTTGCC CTATTACTGATTGGTTTCTTCTTTGTGCGTCGTCAACTCACGCAATCCTTCCCACTGCTCCCCGTGGATTTACTGCGTAT TCCTATTTTCGCGTTGTCGATTGGCACTTCAATTTTTTCTTTTGCCGCTCAAATGCTGGCAATGGTGTCGCTTCCCTTCT TTTTACAGACCGTATTGGGCCGCGACGAAGTGGCAACCGGGCTACTGTTGACTCCATGGCCGTTGGCCACCATGGTCATT GCTCCGATCGCGGGGCGTTTGGTTGAGCGCTATCATGCAGGTTTATTAGGTGGGATTGGTCTGGCTGTTTTTGCCAGTGG TCTATTCTTGCTGGCGGTGTTACCCGCCAACCCCAGCGACGTAGATATTATCTGGCGGATGATACTGTGTGGCGCGGGTT TTGGGCTGTTCCAGACCCCAAATAATCATACGATCATTTCTGCCGCTCCACAGCATCGTAGCGGCGGAGCCAGTGGCATG TTGGGGACCGCCCGCTTGCTAGGACAGACCTCAGGTGCTGCCTTGGTTGCGCTAATGTTCAATATGTTCTCAACCAACGG CACCCACGCCTCCTTGATACTGGCTGGCTGTTTTGCCAGTATCGCGGCACTGGTGAGTCTCTTACGTGTAACACAAAAAA GTCATTAG
Upstream 100 bases:
>100_bases TATACTTACAATTAATCTGATGTGTAAGGATGCAATCAGGGGCAATAATCGTTAGCATATCAATACTCACCTATTTTATT ACTTTTACAGATACGCACCT
Downstream 100 bases:
>100_bases GCTCTTGGGGGAAGCCTGAATATTGGCTTCCCCCCGGCAAGACGATCACTGATTTATTGTAGTGGCTGCTGCCCTTCAAT GGGTGAGCCAAAATCATCAA
Product: major facilitator superfamily multidrug efflux transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MNPSTSDGLPVPQRYAAILVIALGIMMAVLDGTIANVALPTIARDLNTSPATSIWVVNAYQLAITISLLSMASLGDIIGY RRVYQAGLLIFSVTSLFCALSDSLWTLTFARVLQGFGAAALMSVNTALIRIIYPRAQLGRGIGINTLIVAVSSAAGPSIA AAVLSVASWQWLFALNVPIGLLAWCLGIKFLPANNTKSNGNRFDITSCVLNALTFGLLIIAISGFSQGQSPAVIAAQVVA LLLIGFFFVRRQLTQSFPLLPVDLLRIPIFALSIGTSIFSFAAQMLAMVSLPFFLQTVLGRDEVATGLLLTPWPLATMVI APIAGRLVERYHAGLLGGIGLAVFASGLFLLAVLPANPSDVDIIWRMILCGAGFGLFQTPNNHTIISAAPQHRSGGASGM LGTARLLGQTSGAALVALMFNMFSTNGTHASLILAGCFASIAALVSLLRVTQKSH
Sequences:
>Translated_455_residues MNPSTSDGLPVPQRYAAILVIALGIMMAVLDGTIANVALPTIARDLNTSPATSIWVVNAYQLAITISLLSMASLGDIIGY RRVYQAGLLIFSVTSLFCALSDSLWTLTFARVLQGFGAAALMSVNTALIRIIYPRAQLGRGIGINTLIVAVSSAAGPSIA AAVLSVASWQWLFALNVPIGLLAWCLGIKFLPANNTKSNGNRFDITSCVLNALTFGLLIIAISGFSQGQSPAVIAAQVVA LLLIGFFFVRRQLTQSFPLLPVDLLRIPIFALSIGTSIFSFAAQMLAMVSLPFFLQTVLGRDEVATGLLLTPWPLATMVI APIAGRLVERYHAGLLGGIGLAVFASGLFLLAVLPANPSDVDIIWRMILCGAGFGLFQTPNNHTIISAAPQHRSGGASGM LGTARLLGQTSGAALVALMFNMFSTNGTHASLILAGCFASIAALVSLLRVTQKSH >Mature_455_residues MNPSTSDGLPVPQRYAAILVIALGIMMAVLDGTIANVALPTIARDLNTSPATSIWVVNAYQLAITISLLSMASLGDIIGY RRVYQAGLLIFSVTSLFCALSDSLWTLTFARVLQGFGAAALMSVNTALIRIIYPRAQLGRGIGINTLIVAVSSAAGPSIA AAVLSVASWQWLFALNVPIGLLAWCLGIKFLPANNTKSNGNRFDITSCVLNALTFGLLIIAISGFSQGQSPAVIAAQVVA LLLIGFFFVRRQLTQSFPLLPVDLLRIPIFALSIGTSIFSFAAQMLAMVSLPFFLQTVLGRDEVATGLLLTPWPLATMVI APIAGRLVERYHAGLLGGIGLAVFASGLFLLAVLPANPSDVDIIWRMILCGAGFGLFQTPNNHTIISAAPQHRSGGASGM LGTARLLGQTSGAALVALMFNMFSTNGTHASLILAGCFASIAALVSLLRVTQKSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=452, Percent_Identity=69.6902654867257, Blast_Score=624, Evalue=1e-180, Organism=Escherichia coli, GI1788392, Length=328, Percent_Identity=30.7926829268293, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI1790195, Length=325, Percent_Identity=30.1538461538462, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1789042, Length=409, Percent_Identity=27.1393643031785, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1788710, Length=406, Percent_Identity=25.8620689655172, Blast_Score=103, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6325455, Length=142, Percent_Identity=32.3943661971831, Blast_Score=70, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6319770, Length=317, Percent_Identity=23.9747634069401, Blast_Score=64, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47781; Mature: 47781
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSTSDGLPVPQRYAAILVIALGIMMAVLDGTIANVALPTIARDLNTSPATSIWVVNAY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEHH QLAITISLLSMASLGDIIGYRRVYQAGLLIFSVTSLFCALSDSLWTLTFARVLQGFGAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LMSVNTALIRIIYPRAQLGRGIGINTLIVAVSSAAGPSIAAAVLSVASWQWLFALNVPIG HHHHHHHHHHEEECHHHHCCCCCHHHHHHEECCCCCHHHHHHHHHHHCCCEEEEECCCHH LLAWCLGIKFLPANNTKSNGNRFDITSCVLNALTFGLLIIAISGFSQGQSPAVIAAQVVA HHHHHHCCEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LLLIGFFFVRRQLTQSFPLLPVDLLRIPIFALSIGTSIFSFAAQMLAMVSLPFFLQTVLG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RDEVATGLLLTPWPLATMVIAPIAGRLVERYHAGLLGGIGLAVFASGLFLLAVLPANPSD CHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCH VDIIWRMILCGAGFGLFQTPNNHTIISAAPQHRSGGASGMLGTARLLGQTSGAALVALMF HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHH NMFSTNGTHASLILAGCFASIAALVSLLRVTQKSH HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNPSTSDGLPVPQRYAAILVIALGIMMAVLDGTIANVALPTIARDLNTSPATSIWVVNAY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEEHH QLAITISLLSMASLGDIIGYRRVYQAGLLIFSVTSLFCALSDSLWTLTFARVLQGFGAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LMSVNTALIRIIYPRAQLGRGIGINTLIVAVSSAAGPSIAAAVLSVASWQWLFALNVPIG HHHHHHHHHHEEECHHHHCCCCCHHHHHHEECCCCCHHHHHHHHHHHCCCEEEEECCCHH LLAWCLGIKFLPANNTKSNGNRFDITSCVLNALTFGLLIIAISGFSQGQSPAVIAAQVVA HHHHHHCCEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LLLIGFFFVRRQLTQSFPLLPVDLLRIPIFALSIGTSIFSFAAQMLAMVSLPFFLQTVLG HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RDEVATGLLLTPWPLATMVIAPIAGRLVERYHAGLLGGIGLAVFASGLFLLAVLPANPSD CHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCH VDIIWRMILCGAGFGLFQTPNNHTIISAAPQHRSGGASGMLGTARLLGQTSGAALVALMF HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHH NMFSTNGTHASLILAGCFASIAALVSLLRVTQKSH HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]