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The map label for this gene is ydiU [C]

Identifier: 51596645

GI number: 51596645

Start: 2743188

End: 2744651

Strand: Reverse

Name: ydiU [C]

Synonym: YPTB2321

Alternate gene names: 51596645

Gene position: 2744651-2743188 (Counterclockwise)

Preceding gene: 51596646

Following gene: 51596642

Centisome position: 57.85

GC content: 49.04

Gene sequence:

>1464_bases
ATGAAACCCAGAATGGAATACGCCCCTGAATTCGATAACAGCTATGCGCGGCAGTTGAGTGGTTTTTACACCCGCTTGCA
ACCTACGCCATTAAAAGGTGCCCGCTTGTTGTATCACAGCAAACCTCTGGCGCAAGAGTTAGGGCTGGATGCTCATTGGT
TCACTGAACCAAAGACTGCTGTGTGGGCGGGGGAAGCACTGTTACCCGGAATGGAGCCGCTAGCGCAGGTGTATAGCGGC
CATCAATTTGGCATGTGGGCAGGGCAGCTTGGGGATGGCCGTGGGATCTTGTTAGGAGAACAGCGGCTTAATGATGGCCG
CTATATGGATTGGCATTTAAAAGGCGCTGGATTAACACCTTATTCCCGTATGGGGGATGGCCGGGCTGTCTTGCGTTCTG
TGATACGTGAGTTTTTGGCCTCCGAAGCATTACACCATTTAGGTATTCCAACCAGCCGTGCTCTGACAATTGTGACTAGC
GATCATCCAATCTACCGTGAGCAAACTGAACGAGGCGCGATGCTACTAAGGGTGGCGGAAAGCCATATTCGCTTCGGTCA
TTTCGAGCATTTCTACTATCGGCAGCAACCTAAGCAAGTTCAACAATTAGCGGATTATGTTATTGCCCGCCACTGGCCGC
AGTGGGTGGGGCACCAAGAATGCTACCGACTGTGGTTTACGGATGTGGTAGAGCGAACCGCGCGTTTAATGGCCCACTGG
CAAACCGTCGGGTTTGCTCATGGTGTGATGAATACCGATAATATGTCAATTCTTGGCATTACTATGGATTATGGCCCATT
TGGTTTTCTCGATGACTATGTGCCTGGATATATCTGTAACCACTCCGACCATCAAGGGCGTTATGCTTATGATAATCAGC
CTGCCGTAGCGTTATGGAATTTGCATCGATTGGGGCACGCGTTGTCAGGTTTAATGTCTGCTGACCAATTGCAGTTGGCG
CTAGAGGCTTATGAACCGGCACTTATGGTTGCTTATGGTGAACAGATGCGAGCCAAGTTAGGTTTTCTTGAGCGTGACAG
CCAAGATAACGATTTGCTGACAGGTTTGTTGAGTTTGATGATCAAAGAAGGCCGGGATTATACCCGGACTTTCCGCTTAT
TGAGCGAAGTTGAAGTACACTCTGCACAATCGCCATTGCGGGATGACTTTATCGATAGAGCCGCTTTTGACGACTGGTAC
CGCCGTTATCGTTCACGGTTGCAGCAAGAATCCATCGATGATGATCAGCGCCAGCAATCGATGAAAGCGGCTAATCCTAA
ATATATATTACGTAATTATTTGGCTCAGCAGGCGATTACTCAGGCAGAAAAAGATGATATTCAGCCACTTCAGCGGTTGC
ACCAGGCATTACAGCAACCGTTTACTGATCAACCTGAATTTGATGATTTAGCGGCGTTACCCCCAGATTGGGGAAAACAC
CTCGAGATCTCTTGTTCCAGCTGA

Upstream 100 bases:

>100_bases
AACCGAGTTACAGCAAGCCTGCCATTGGCTGGTAGAAGTATTACGCTAATCTTTCAATTACCGTGGTTATTGGCCGCGCA
CAGCACTCGTGGACATAGAG

Downstream 100 bases:

>100_bases
ATTTTTATTCCATTTGGCACTTGTAATGTGCGCCATTACAGAGAATAGATCGCTGTTTTTTCGGAAAAAATAGGGATAGA
AAAAGTTAACCCGACAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MKPRMEYAPEFDNSYARQLSGFYTRLQPTPLKGARLLYHSKPLAQELGLDAHWFTEPKTAVWAGEALLPGMEPLAQVYSG
HQFGMWAGQLGDGRGILLGEQRLNDGRYMDWHLKGAGLTPYSRMGDGRAVLRSVIREFLASEALHHLGIPTSRALTIVTS
DHPIYREQTERGAMLLRVAESHIRFGHFEHFYYRQQPKQVQQLADYVIARHWPQWVGHQECYRLWFTDVVERTARLMAHW
QTVGFAHGVMNTDNMSILGITMDYGPFGFLDDYVPGYICNHSDHQGRYAYDNQPAVALWNLHRLGHALSGLMSADQLQLA
LEAYEPALMVAYGEQMRAKLGFLERDSQDNDLLTGLLSLMIKEGRDYTRTFRLLSEVEVHSAQSPLRDDFIDRAAFDDWY
RRYRSRLQQESIDDDQRQQSMKAANPKYILRNYLAQQAITQAEKDDIQPLQRLHQALQQPFTDQPEFDDLAALPPDWGKH
LEISCSS

Sequences:

>Translated_487_residues
MKPRMEYAPEFDNSYARQLSGFYTRLQPTPLKGARLLYHSKPLAQELGLDAHWFTEPKTAVWAGEALLPGMEPLAQVYSG
HQFGMWAGQLGDGRGILLGEQRLNDGRYMDWHLKGAGLTPYSRMGDGRAVLRSVIREFLASEALHHLGIPTSRALTIVTS
DHPIYREQTERGAMLLRVAESHIRFGHFEHFYYRQQPKQVQQLADYVIARHWPQWVGHQECYRLWFTDVVERTARLMAHW
QTVGFAHGVMNTDNMSILGITMDYGPFGFLDDYVPGYICNHSDHQGRYAYDNQPAVALWNLHRLGHALSGLMSADQLQLA
LEAYEPALMVAYGEQMRAKLGFLERDSQDNDLLTGLLSLMIKEGRDYTRTFRLLSEVEVHSAQSPLRDDFIDRAAFDDWY
RRYRSRLQQESIDDDQRQQSMKAANPKYILRNYLAQQAITQAEKDDIQPLQRLHQALQQPFTDQPEFDDLAALPPDWGKH
LEISCSS
>Mature_487_residues
MKPRMEYAPEFDNSYARQLSGFYTRLQPTPLKGARLLYHSKPLAQELGLDAHWFTEPKTAVWAGEALLPGMEPLAQVYSG
HQFGMWAGQLGDGRGILLGEQRLNDGRYMDWHLKGAGLTPYSRMGDGRAVLRSVIREFLASEALHHLGIPTSRALTIVTS
DHPIYREQTERGAMLLRVAESHIRFGHFEHFYYRQQPKQVQQLADYVIARHWPQWVGHQECYRLWFTDVVERTARLMAHW
QTVGFAHGVMNTDNMSILGITMDYGPFGFLDDYVPGYICNHSDHQGRYAYDNQPAVALWNLHRLGHALSGLMSADQLQLA
LEAYEPALMVAYGEQMRAKLGFLERDSQDNDLLTGLLSLMIKEGRDYTRTFRLLSEVEVHSAQSPLRDDFIDRAAFDDWY
RRYRSRLQQESIDDDQRQQSMKAANPKYILRNYLAQQAITQAEKDDIQPLQRLHQALQQPFTDQPEFDDLAALPPDWGKH
LEISCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family

Homologues:

Organism=Homo sapiens, GI32880229, Length=470, Percent_Identity=41.063829787234, Blast_Score=303, Evalue=3e-82,
Organism=Escherichia coli, GI1787999, Length=477, Percent_Identity=64.9895178197065, Blast_Score=649, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6325034, Length=294, Percent_Identity=39.4557823129252, Blast_Score=203, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1840_YERPY (B1JJ37)

Other databases:

- EMBL:   CP000950
- RefSeq:   YP_001720584.1
- GeneID:   6089298
- GenomeReviews:   CP000950_GR
- KEGG:   ypy:YPK_1840
- HOGENOM:   HBG683993
- OMA:   FGSYNPR
- ProtClustDB:   PRK00029
- HAMAP:   MF_00692
- InterPro:   IPR003846

Pfam domain/function: PF02696 UPF0061

EC number: NA

Molecular weight: Translated: 56030; Mature: 56030

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRMEYAPEFDNSYARQLSGFYTRLQPTPLKGARLLYHSKPLAQELGLDAHWFTEPKTA
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHCCCCEECCCCCHH
VWAGEALLPGMEPLAQVYSGHQFGMWAGQLGDGRGILLGEQRLNDGRYMDWHLKGAGLTP
EEECCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCCCEEEEEECCCCCCC
YSRMGDGRAVLRSVIREFLASEALHHLGIPTSRALTIVTSDHPIYREQTERGAMLLRVAE
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
SHIRFGHFEHFYYRQQPKQVQQLADYVIARHWPQWVGHQECYRLWFTDVVERTARLMAHW
HHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QTVGFAHGVMNTDNMSILGITMDYGPFGFLDDYVPGYICNHSDHQGRYAYDNQPAVALWN
HHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHCCCCEEECCCCCCCCCEECCCCCEEHHH
LHRLGHALSGLMSADQLQLALEAYEPALMVAYGEQMRAKLGFLERDSQDNDLLTGLLSLM
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCHHHCCCCCHHHHHHHHHHH
IKEGRDYTRTFRLLSEVEVHSAQSPLRDDFIDRAAFDDWYRRYRSRLQQESIDDDQRQQS
HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MKAANPKYILRNYLAQQAITQAEKDDIQPLQRLHQALQQPFTDQPEFDDLAALPPDWGKH
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
LEISCSS
EEEEECC
>Mature Secondary Structure
MKPRMEYAPEFDNSYARQLSGFYTRLQPTPLKGARLLYHSKPLAQELGLDAHWFTEPKTA
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHCCCCEECCCCCHH
VWAGEALLPGMEPLAQVYSGHQFGMWAGQLGDGRGILLGEQRLNDGRYMDWHLKGAGLTP
EEECCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHCCCCCEEEEEECCCCCCC
YSRMGDGRAVLRSVIREFLASEALHHLGIPTSRALTIVTSDHPIYREQTERGAMLLRVAE
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
SHIRFGHFEHFYYRQQPKQVQQLADYVIARHWPQWVGHQECYRLWFTDVVERTARLMAHW
HHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QTVGFAHGVMNTDNMSILGITMDYGPFGFLDDYVPGYICNHSDHQGRYAYDNQPAVALWN
HHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHCCCCEEECCCCCCCCCEECCCCCEEHHH
LHRLGHALSGLMSADQLQLALEAYEPALMVAYGEQMRAKLGFLERDSQDNDLLTGLLSLM
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCHHHCCCCCHHHHHHHHHHH
IKEGRDYTRTFRLLSEVEVHSAQSPLRDDFIDRAAFDDWYRRYRSRLQQESIDDDQRQQS
HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
MKAANPKYILRNYLAQQAITQAEKDDIQPLQRLHQALQQPFTDQPEFDDLAALPPDWGKH
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
LEISCSS
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA