| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yciW [H]
Identifier: 51596601
GI number: 51596601
Start: 2687457
End: 2688737
Strand: Direct
Name: yciW [H]
Synonym: YPTB2277
Alternate gene names: 51596601
Gene position: 2687457-2688737 (Clockwise)
Preceding gene: 51596600
Following gene: 51596602
Centisome position: 56.64
GC content: 50.51
Gene sequence:
>1281_bases ATGGTGCAATTTCGCAGGAGAAATAATGCCCATTGGTATCATGAGACTCAGTGTAGCGGCAGCCTGGAGCATTGTAGCGG TAGCCCAGTGAATATTTCCACGACAGTGAATGTTCCCACGACAGTGAATAATGAAAACCCCCCTGTTGATATTCGGCCAC GTGATCCCAGCGAGAGTGACAACATGAGCACTGGCAGTAATATAACTGAACAGAGCATCATAACTGAACAGGGCATCTTT CTACTTGGCGTGACAGAAAACATCGCTCCTACATTACAAGACACCCTCTACCATGAGCAGCCTATTCTTACTGCCTCCGA CGCCATGTATCAGGCCCTGTTCCCAACGATTATCGAGATCAACCACACCAATACCTTCTCACTTTATGATCGGTTAAGTA CTGCGCTGACGGTCGCTCAGGTTACCGGGATTCAGCGGCTATGTAGCCACTATGCTCTCCGTCTCGCGCCGCTCCCCAGC CCGGATGCCTCAAGGGAAAGCAATATTAGGCTAACGCAAATTACGCAATATGCCCGCCAATTGGCCAGCCAACCTACGTT GATCGATAGGCATGCTTTAGCGCAATTGCATGACGTGGGTTTAACTGATAGCGATATCATTATTTTATCGCAAATTATTG GATATGTGGGATATCAAGCCCGAGTGGTCGCTGGCATCTCTGCACTGGCTGGTTACCCTACCGTGATGCTCCCCGGTTTC CCCCGCATGGAAGATGCCGCCCCCAGCCCATTACCAGATGTCATGCCCAATTGGCAAGGTTGGCTACCGTCTCATGCGGC AAACGACGATCAACCCGATAAAGAACCTGACGAAACGGCCAGCACACTGACTGAACTGTTGGGCCATCACCAGCAAAGTT TGCTCGCTTATCACGCCATTACCACTCACCAGCCCAACTCACCTCAATTGCAACGTGACTGGCTGGAACTGGTGGCATTG GTCAGCGCACGAATCAATGGCAGCCTCTACTGCCAAGCCCGTCACAGGCAACATTTACAGCAACTGACGGAGCCGCCCCT GTTGGTCACTGAGCTGTTAAAAGGGATTGATCACGCGTTATTCTTGTTACCCGAACAACAAATACCCCATCAGCTAATCA GTGTAACCGCCGAGCTCACTCGCGCCCCGGAACGCTTTAATCATCAGCATGTTAAACGTCTACAGACCCTTGGCGTCAGT GATACTCAAGTCATGCGAATTATTTTCAGTATCGCCATTACTGGTTGGACCAACCGCCTACGACATACGTTAGGAAAATA G
Upstream 100 bases:
>100_bases TGTCCAATAGCTGAGCCACCCGATGCGACTGGATTACCTGTTATCACCCTGCACTTATCCTTAATACGAACAAATCGCTG CCCTGACGGAGGTCATCATT
Downstream 100 bases:
>100_bases CGGGTCAGTTCGTCAGGGGGCAGCCCCCCCTCAGCCATTATTGTGCGCCGTTTGCTATCAGTAAGGACAAAAATATCAGG TAGGTAAAAACCATCAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MVQFRRRNNAHWYHETQCSGSLEHCSGSPVNISTTVNVPTTVNNENPPVDIRPRDPSESDNMSTGSNITEQSIITEQGIF LLGVTENIAPTLQDTLYHEQPILTASDAMYQALFPTIIEINHTNTFSLYDRLSTALTVAQVTGIQRLCSHYALRLAPLPS PDASRESNIRLTQITQYARQLASQPTLIDRHALAQLHDVGLTDSDIIILSQIIGYVGYQARVVAGISALAGYPTVMLPGF PRMEDAAPSPLPDVMPNWQGWLPSHAANDDQPDKEPDETASTLTELLGHHQQSLLAYHAITTHQPNSPQLQRDWLELVAL VSARINGSLYCQARHRQHLQQLTEPPLLVTELLKGIDHALFLLPEQQIPHQLISVTAELTRAPERFNHQHVKRLQTLGVS DTQVMRIIFSIAITGWTNRLRHTLGK
Sequences:
>Translated_426_residues MVQFRRRNNAHWYHETQCSGSLEHCSGSPVNISTTVNVPTTVNNENPPVDIRPRDPSESDNMSTGSNITEQSIITEQGIF LLGVTENIAPTLQDTLYHEQPILTASDAMYQALFPTIIEINHTNTFSLYDRLSTALTVAQVTGIQRLCSHYALRLAPLPS PDASRESNIRLTQITQYARQLASQPTLIDRHALAQLHDVGLTDSDIIILSQIIGYVGYQARVVAGISALAGYPTVMLPGF PRMEDAAPSPLPDVMPNWQGWLPSHAANDDQPDKEPDETASTLTELLGHHQQSLLAYHAITTHQPNSPQLQRDWLELVAL VSARINGSLYCQARHRQHLQQLTEPPLLVTELLKGIDHALFLLPEQQIPHQLISVTAELTRAPERFNHQHVKRLQTLGVS DTQVMRIIFSIAITGWTNRLRHTLGK >Mature_426_residues MVQFRRRNNAHWYHETQCSGSLEHCSGSPVNISTTVNVPTTVNNENPPVDIRPRDPSESDNMSTGSNITEQSIITEQGIF LLGVTENIAPTLQDTLYHEQPILTASDAMYQALFPTIIEINHTNTFSLYDRLSTALTVAQVTGIQRLCSHYALRLAPLPS PDASRESNIRLTQITQYARQLASQPTLIDRHALAQLHDVGLTDSDIIILSQIIGYVGYQARVVAGISALAGYPTVMLPGF PRMEDAAPSPLPDVMPNWQGWLPSHAANDDQPDKEPDETASTLTELLGHHQQSLLAYHAITTHQPNSPQLQRDWLELVAL VSARINGSLYCQARHRQHLQQLTEPPLLVTELLKGIDHALFLLPEQQIPHQLISVTAELTRAPERFNHQHVKRLQTLGVS DTQVMRIIFSIAITGWTNRLRHTLGK
Specific function: Unknown
COG id: COG4950
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081868, Length=323, Percent_Identity=38.390092879257, Blast_Score=195, Evalue=4e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47483; Mature: 47483
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQFRRRNNAHWYHETQCSGSLEHCSGSPVNISTTVNVPTTVNNENPPVDIRPRDPSESD CCCCCCCCCCCCEEECCCCCCHHHCCCCCEEEEEEEECCEEECCCCCCEEECCCCCCCCC NMSTGSNITEQSIITEQGIFLLGVTENIAPTLQDTLYHEQPILTASDAMYQALFPTIIEI CCCCCCCCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCEEHHHHHHHHHCCHHEEE NHTNTFSLYDRLSTALTVAQVTGIQRLCSHYALRLAPLPSPDASRESNIRLTQITQYARQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHH LASQPTLIDRHALAQLHDVGLTDSDIIILSQIIGYVGYQARVVAGISALAGYPTVMLPGF HCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCC PRMEDAAPSPLPDVMPNWQGWLPSHAANDDQPDKEPDETASTLTELLGHHQQSLLAYHAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TTHQPNSPQLQRDWLELVALVSARINGSLYCQARHRQHLQQLTEPPLLVTELLKGIDHAL HCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHCCHHE FLLPEQQIPHQLISVTAELTRAPERFNHQHVKRLQTLGVSDTQVMRIIFSIAITGWTNRL EECCCHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RHTLGK HHHHCC >Mature Secondary Structure MVQFRRRNNAHWYHETQCSGSLEHCSGSPVNISTTVNVPTTVNNENPPVDIRPRDPSESD CCCCCCCCCCCCEEECCCCCCHHHCCCCCEEEEEEEECCEEECCCCCCEEECCCCCCCCC NMSTGSNITEQSIITEQGIFLLGVTENIAPTLQDTLYHEQPILTASDAMYQALFPTIIEI CCCCCCCCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCEEHHHHHHHHHCCHHEEE NHTNTFSLYDRLSTALTVAQVTGIQRLCSHYALRLAPLPSPDASRESNIRLTQITQYARQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHH LASQPTLIDRHALAQLHDVGLTDSDIIILSQIIGYVGYQARVVAGISALAGYPTVMLPGF HCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCC PRMEDAAPSPLPDVMPNWQGWLPSHAANDDQPDKEPDETASTLTELLGHHQQSLLAYHAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TTHQPNSPQLQRDWLELVALVSARINGSLYCQARHRQHLQQLTEPPLLVTELLKGIDHAL HCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHCCHHE FLLPEQQIPHQLISVTAELTRAPERFNHQHVKRLQTLGVSDTQVMRIIFSIAITGWTNRL EECCCHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RHTLGK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]