| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596553
Identifier: 51596553
GI number: 51596553
Start: 2631295
End: 2631711
Strand: Reverse
Name: 51596553
Synonym: YPTB2229
Alternate gene names: NA
Gene position: 2631711-2631295 (Counterclockwise)
Preceding gene: 51596558
Following gene: 51596550
Centisome position: 55.47
GC content: 43.17
Gene sequence:
>417_bases ATGAGTGGCGAACGCGTCAGTGCACCACAGTGCAGTGGAAAAGTCTGCTTTGATTACACGGAATTTCTCGCTGCTTCTTG CAAGAAGCATTGGAGCTTTGTTGACGCTATTTATGGCGTGATGCCTATTTTTGGTATGGTGGTGAAGTCACAAACTGAAT TAGAGAGAACGCCGCAAGCTCAGCTTACGGCATTGGCGCTGCAAGTATTATCAACACAACTCAATGATGAGACCAATATT ATTCGATTGATTAAATTAGCAAAACAGCGTGGCATCACCGTATTGGACATCCAATTGCCTTACCCATTGGAAGCGGCTCA ACTTAGAACAATCAAGCAGAAATTCCCCGCTGAAATGGCATTGAGTCAGAAAGATGAATGTCTATCTGTGAATTTATCCC AAATGCCAAATGATTAG
Upstream 100 bases:
>100_bases ATGGTTATTATATCGTCATCTTTATTTGGTTTCGTCTATCGTTTATATACCAAGCCCCTTAATGACTGAATAGCTGTATT GATCAACTGAGGATGAAGGG
Downstream 100 bases:
>100_bases TTTTTGAAGAACCGGTCACTAACCTAGTGCATCATCAACCATGTCGCTGGGATAGTGGCGAGTAACACGAGGAAAATCGC CGCCCGCTCAACCGTATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSGERVSAPQCSGKVCFDYTEFLAASCKKHWSFVDAIYGVMPIFGMVVKSQTELERTPQAQLTALALQVLSTQLNDETNI IRLIKLAKQRGITVLDIQLPYPLEAAQLRTIKQKFPAEMALSQKDECLSVNLSQMPND
Sequences:
>Translated_138_residues MSGERVSAPQCSGKVCFDYTEFLAASCKKHWSFVDAIYGVMPIFGMVVKSQTELERTPQAQLTALALQVLSTQLNDETNI IRLIKLAKQRGITVLDIQLPYPLEAAQLRTIKQKFPAEMALSQKDECLSVNLSQMPND >Mature_137_residues SGERVSAPQCSGKVCFDYTEFLAASCKKHWSFVDAIYGVMPIFGMVVKSQTELERTPQAQLTALALQVLSTQLNDETNII RLIKLAKQRGITVLDIQLPYPLEAAQLRTIKQKFPAEMALSQKDECLSVNLSQMPND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15393; Mature: 15262
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGERVSAPQCSGKVCFDYTEFLAASCKKHWSFVDAIYGVMPIFGMVVKSQTELERTPQA CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHH QLTALALQVLSTQLNDETNIIRLIKLAKQRGITVLDIQLPYPLEAAQLRTIKQKFPAEMA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCHHHH LSQKDECLSVNLSQMPND HCCCCCCEECCHHCCCCC >Mature Secondary Structure SGERVSAPQCSGKVCFDYTEFLAASCKKHWSFVDAIYGVMPIFGMVVKSQTELERTPQA CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCHH QLTALALQVLSTQLNDETNIIRLIKLAKQRGITVLDIQLPYPLEAAQLRTIKQKFPAEMA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCHHHH LSQKDECLSVNLSQMPND HCCCCCCEECCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA