| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is amn
Identifier: 51596535
GI number: 51596535
Start: 2604403
End: 2605893
Strand: Reverse
Name: amn
Synonym: YPTB2211
Alternate gene names: 51596535
Gene position: 2605893-2604403 (Counterclockwise)
Preceding gene: 51596539
Following gene: 51596531
Centisome position: 54.92
GC content: 49.77
Gene sequence:
>1491_bases TTGAATAAATTACAAGATACAGGCTCTCTCGCAGTTGTTGAGGCCATTGATAAGCTGGAAATGCTCTATGATGCAGCGTT AGCCGCTTTACGGGATGCGATCAGCGCATTTATTCGTGATGGTTCTTTGCCTAATGCAGCGGAAAGATCCAAGGGGTTAT TTAGCTACCCACAGCTTAGTGTCCGATGGGATGGTAAATTTAGCGATCATCACCGCACGCGTGCATACGGGCGCTTTTCC CGGGCAGGGCAATACAGCACCACAATCACTCGACCCGCACTGTTCAGGGAATATCTGACCGAGCAAATGACGCTGCTTGA AAGTGAGTATGGCGCGGTATTTGAAGTGACACCGTCACAACAAGAGATGCCTTATCCGTTTGTTATCGATGGTTCAGACC TGATCCTTGATCGGTCAATGACCGCAGGCCTTGCCCAGCACTTCCCGACGACAGATCTGGCTAAAATCGGTGATGGCATC ACCGACGGAATTGAAACGATAGCGCTTGGCACGGCATCACTTGGCAGCGCAGTAAGTGATCTACCGTTGTCTCACTTTGA TGCGCTGCGCACTGATTTTTCCCTCGCACGGTTAAAACACTATACCGGTACGCCAGCCGAAGACATTCAACCGTATATTC TTTTTACCAATTACAGCCGTTATGTTGATGAATTTGTCCGTTGGGCGGGTGAGCAAATTTTGGATCCAAACAGCCCCTAT AAAGCACTCTCCTGCGCAGGCGGTAGTTACATCACGGCAGAGAATGCCGATCCGGAAAAAACCCTTTCTGACCTGGCGTG GAAAAAACATCAGATGCCAGCCTATCACCTGATAGCCAAAAATGGGCAGGGCATCACATTGGTTAATATTGGTGTCGGCC CCTCCAATGCCAAAACAATTTGTGACCACTTGGCGGTATTGAGGCCACATGTTTGGTTGATGATTGGCCACTGTGGTGGC CTGCGAGAAAGCCAATCCATTGGTGATTATGTGCTGGCACATGCGTACTTGCGTGATGACCATGTTCTGGATGCGGTATT ACCGCCCGATATTCCGATCCCTAGCATTGCCGAGATACAACGCGCCTTGTACGACGCGACCAAAGCCGTTAGTGGTATGC CAGGCGTTGAGGTAAAACAACGTCTGCGCACCGGGACTGTCGTTACCTCTGATGATCGTAACTGGGAATTACGTTTCTCC GCCTCATCGCTACGTTTTAGTTTAAGTCGCGCGGTGGCTGTTGATATGGAAAGCGCCACTATCGCTGCTCAAGGCTATCG CTTCCGGGTGCCTTACGGGACCTTGCTTTGTGTTTCCGACAAGCCATTACATGGCGAAATTAAACTGCCGGGGCAGGCCA ACCATTTTTATGAGGGTGCTATTTCTGAGCATTTGCAGATTGGTATTCGGGCAATCGATTTGCTACGGGCAGAAGGTGAC CAATTACACTCTCGTAAATTACGTACCTTTAATGAGCCACCGTTCCGTTAA
Upstream 100 bases:
>100_bases CAAAAGGTCCTCCTGTTTTCAGGAAAAGGCTGGATTTGCTGCGCAATAAATAGCACTGTGTTGGTCAATAATCGCTGCTC TTGTGTTTAAAGGAGGTACT
Downstream 100 bases:
>100_bases AAAGAATAGATTGAAAAACAACGCAGGCGGATGATGATCACCGCCTGCGTATTGAATTGAGAGAGCTTACATTAATCAGC GAATGCCGGTGCCTATCCTG
Product: AMP nucleosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MNKLQDTGSLAVVEAIDKLEMLYDAALAALRDAISAFIRDGSLPNAAERSKGLFSYPQLSVRWDGKFSDHHRTRAYGRFS RAGQYSTTITRPALFREYLTEQMTLLESEYGAVFEVTPSQQEMPYPFVIDGSDLILDRSMTAGLAQHFPTTDLAKIGDGI TDGIETIALGTASLGSAVSDLPLSHFDALRTDFSLARLKHYTGTPAEDIQPYILFTNYSRYVDEFVRWAGEQILDPNSPY KALSCAGGSYITAENADPEKTLSDLAWKKHQMPAYHLIAKNGQGITLVNIGVGPSNAKTICDHLAVLRPHVWLMIGHCGG LRESQSIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEIQRALYDATKAVSGMPGVEVKQRLRTGTVVTSDDRNWELRFS ASSLRFSLSRAVAVDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANHFYEGAISEHLQIGIRAIDLLRAEGD QLHSRKLRTFNEPPFR
Sequences:
>Translated_496_residues MNKLQDTGSLAVVEAIDKLEMLYDAALAALRDAISAFIRDGSLPNAAERSKGLFSYPQLSVRWDGKFSDHHRTRAYGRFS RAGQYSTTITRPALFREYLTEQMTLLESEYGAVFEVTPSQQEMPYPFVIDGSDLILDRSMTAGLAQHFPTTDLAKIGDGI TDGIETIALGTASLGSAVSDLPLSHFDALRTDFSLARLKHYTGTPAEDIQPYILFTNYSRYVDEFVRWAGEQILDPNSPY KALSCAGGSYITAENADPEKTLSDLAWKKHQMPAYHLIAKNGQGITLVNIGVGPSNAKTICDHLAVLRPHVWLMIGHCGG LRESQSIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEIQRALYDATKAVSGMPGVEVKQRLRTGTVVTSDDRNWELRFS ASSLRFSLSRAVAVDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANHFYEGAISEHLQIGIRAIDLLRAEGD QLHSRKLRTFNEPPFR >Mature_496_residues MNKLQDTGSLAVVEAIDKLEMLYDAALAALRDAISAFIRDGSLPNAAERSKGLFSYPQLSVRWDGKFSDHHRTRAYGRFS RAGQYSTTITRPALFREYLTEQMTLLESEYGAVFEVTPSQQEMPYPFVIDGSDLILDRSMTAGLAQHFPTTDLAKIGDGI TDGIETIALGTASLGSAVSDLPLSHFDALRTDFSLARLKHYTGTPAEDIQPYILFTNYSRYVDEFVRWAGEQILDPNSPY KALSCAGGSYITAENADPEKTLSDLAWKKHQMPAYHLIAKNGQGITLVNIGVGPSNAKTICDHLAVLRPHVWLMIGHCGG LRESQSIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEIQRALYDATKAVSGMPGVEVKQRLRTGTVVTSDDRNWELRFS ASSLRFSLSRAVAVDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANHFYEGAISEHLQIGIRAIDLLRAEGD QLHSRKLRTFNEPPFR
Specific function: Involved in regulation of AMP concentrations [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788293, Length=494, Percent_Identity=74.2914979757085, Blast_Score=764, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011271 - InterPro: IPR018953 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF10423 AMNp_N; PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.4 [H]
Molecular weight: Translated: 54774; Mature: 54774
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLQDTGSLAVVEAIDKLEMLYDAALAALRDAISAFIRDGSLPNAAERSKGLFSYPQLS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEE VRWDGKFSDHHRTRAYGRFSRAGQYSTTITRPALFREYLTEQMTLLESEYGAVFEVTPSQ EEECCCCCCCHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCCCEEEECCCC QEMPYPFVIDGSDLILDRSMTAGLAQHFPTTDLAKIGDGITDGIETIALGTASLGSAVSD CCCCCCEEECCCCEEEECHHHHHHHHHCCCCHHHHHCCCHHHHHHHHEECCHHHHHHHHH LPLSHFDALRTDFSLARLKHYTGTPAEDIQPYILFTNYSRYVDEFVRWAGEQILDPNSPY CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEECHHHHHHHHHHHCCHHHCCCCCCC KALSCAGGSYITAENADPEKTLSDLAWKKHQMPAYHLIAKNGQGITLVNIGVGPSNAKTI CCEEECCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCCHHHH CDHLAVLRPHVWLMIGHCGGLRESQSIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEIQ HHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH RALYDATKAVSGMPGVEVKQRLRTGTVVTSDDRNWELRFSASSLRFSLSRAVAVDMESAT HHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCEEEEEEHHHHHHHHHHEEEEECCCCE IAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANHFYEGAISEHLQIGIRAIDLLRAEGD EEECCEEEECCCCEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH QLHSRKLRTFNEPPFR HHHHHHHHCCCCCCCC >Mature Secondary Structure MNKLQDTGSLAVVEAIDKLEMLYDAALAALRDAISAFIRDGSLPNAAERSKGLFSYPQLS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEE VRWDGKFSDHHRTRAYGRFSRAGQYSTTITRPALFREYLTEQMTLLESEYGAVFEVTPSQ EEECCCCCCCHHHHHHHHHHCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCCCEEEECCCC QEMPYPFVIDGSDLILDRSMTAGLAQHFPTTDLAKIGDGITDGIETIALGTASLGSAVSD CCCCCCEEECCCCEEEECHHHHHHHHHCCCCHHHHHCCCHHHHHHHHEECCHHHHHHHHH LPLSHFDALRTDFSLARLKHYTGTPAEDIQPYILFTNYSRYVDEFVRWAGEQILDPNSPY CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEECHHHHHHHHHHHCCHHHCCCCCCC KALSCAGGSYITAENADPEKTLSDLAWKKHQMPAYHLIAKNGQGITLVNIGVGPSNAKTI CCEEECCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCCCCHHHH CDHLAVLRPHVWLMIGHCGGLRESQSIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEIQ HHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH RALYDATKAVSGMPGVEVKQRLRTGTVVTSDDRNWELRFSASSLRFSLSRAVAVDMESAT HHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCEEEEEEHHHHHHHHHHEEEEECCCCE IAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANHFYEGAISEHLQIGIRAIDLLRAEGD EEECCEEEECCCCEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH QLHSRKLRTFNEPPFR HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]