| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is ssuA [C]
Identifier: 51596532
GI number: 51596532
Start: 2601294
End: 2602325
Strand: Direct
Name: ssuA [C]
Synonym: YPTB2208
Alternate gene names: 51596532
Gene position: 2601294-2602325 (Clockwise)
Preceding gene: 51596525
Following gene: 51596533
Centisome position: 54.83
GC content: 42.83
Gene sequence:
>1032_bases ATGATTAAGTTTATATCAACATCAATAATATCACTTGAATTTTATAAAACTTCATTAAAAAAATCATTCATAGCAATATC TGCCTTACCATTACTCATGTCCAGCATGGCATGGGCACAGCCAGATGTGGTAAGGCTTGGTAATTTAAAATTCGCTCATT ATGGCGCTATTTCATATATGAAAGAGATAGCACCAAAATATAACATAAAGATAGAAGAACGAATGTTTGCAAAGGGGATA GATATTGCTCCCGCAATCGTCGCGGGGCAAATTGATATAGCGGCCAGTGCAGTTGATGCGGCAATCGCTGCCCGCGCTCA AAATATCCCCATCTATGTTATTGCCGGATTTGCCAAAGGCGGTGCCCGAATTGTTATTGGCAATAATAGCAGTATTAAAT CCGTTGCTGATTTTAAAGGTAAAAAAGTGGGGGTTGCCCGTGGTGGTGCTCAGGAACTTCTTCTTCTGGCAGAGTTGGAT AAATATGGGCTGACATGGTCTGATCGGCCAGGAAAAGATGTTCAGATTATTTATATGGCTTATGCCGATCTTAATCAGGC TCTTCAGTCTGGTAATCTGGATGCTATTAGCCAATCTGAACCGCATGCCAGCCAGGCAATTAATATAGGGTATGGTGTCG AGTTGTTGAAGCCCTACGATACCCCCGTAGGCGTTCCAATTCGCGCGTTGATCATGACGGAAGCCATGTATAAAGAGAAG CCAGAGGTGGCTGCTCGCGTACTTAAACTGTTTGTTGACGCGACCAATACCTTTATTCAACAACCTGAAATAGCGGAAGA ATATGTCCGTAAAGAGATGTTCAAGAACCAAATTACCTCGCAAGATTATCAAGATGCTATTGGTAATTCCCCATTCAGTT ACGACATCACGGTGGAACATGTTCAGGTGACGACTGACTTAATGCGGAAATATGGCATCGGCCGAATGAATAATCCCCCC GTTGCCGCTGATTGGGTAAAGACTGATCTTCTTGAGGCTGCAAAGAAAAGCATTGGGGTTAATGGGTCATAA
Upstream 100 bases:
>100_bases GGGTATATGTCTCTGCAATAAGTCATTATTAATAAATTAAACTTAAGAATAGTAAATGACATGAAGCGATTACAATCGTT TCACATATAAGGGAAAATAT
Downstream 100 bases:
>100_bases CTGATGAAAAATATTAAGGTTTATCAATATATCAAGTGGGTCATTATGCCAACTATTGTGCTGTTAATGTGGCAAATGCT CGCAATATCGGGCTGGATAC
Product: taurine/sulfonate ABC transporter perplasmic-binding protein
Products: NA
Alternate protein names: ABC Transporter
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MIKFISTSIISLEFYKTSLKKSFIAISALPLLMSSMAWAQPDVVRLGNLKFAHYGAISYMKEIAPKYNIKIEERMFAKGI DIAPAIVAGQIDIAASAVDAAIAARAQNIPIYVIAGFAKGGARIVIGNNSSIKSVADFKGKKVGVARGGAQELLLLAELD KYGLTWSDRPGKDVQIIYMAYADLNQALQSGNLDAISQSEPHASQAINIGYGVELLKPYDTPVGVPIRALIMTEAMYKEK PEVAARVLKLFVDATNTFIQQPEIAEEYVRKEMFKNQITSQDYQDAIGNSPFSYDITVEHVQVTTDLMRKYGIGRMNNPP VAADWVKTDLLEAAKKSIGVNGS
Sequences:
>Translated_343_residues MIKFISTSIISLEFYKTSLKKSFIAISALPLLMSSMAWAQPDVVRLGNLKFAHYGAISYMKEIAPKYNIKIEERMFAKGI DIAPAIVAGQIDIAASAVDAAIAARAQNIPIYVIAGFAKGGARIVIGNNSSIKSVADFKGKKVGVARGGAQELLLLAELD KYGLTWSDRPGKDVQIIYMAYADLNQALQSGNLDAISQSEPHASQAINIGYGVELLKPYDTPVGVPIRALIMTEAMYKEK PEVAARVLKLFVDATNTFIQQPEIAEEYVRKEMFKNQITSQDYQDAIGNSPFSYDITVEHVQVTTDLMRKYGIGRMNNPP VAADWVKTDLLEAAKKSIGVNGS >Mature_343_residues MIKFISTSIISLEFYKTSLKKSFIAISALPLLMSSMAWAQPDVVRLGNLKFAHYGAISYMKEIAPKYNIKIEERMFAKGI DIAPAIVAGQIDIAASAVDAAIAARAQNIPIYVIAGFAKGGARIVIGNNSSIKSVADFKGKKVGVARGGAQELLLLAELD KYGLTWSDRPGKDVQIIYMAYADLNQALQSGNLDAISQSEPHASQAINIGYGVELLKPYDTPVGVPIRALIMTEAMYKEK PEVAARVLKLFVDATNTFIQQPEIAEEYVRKEMFKNQITSQDYQDAIGNSPFSYDITVEHVQVTTDLMRKYGIGRMNNPP VAADWVKTDLLEAAKKSIGVNGS
Specific function: Part Of A Binding-Protein-Dependent Transport System For Aliphatic Sulfonates. Putative Binding Protein. [C]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081803, Length=150, Percent_Identity=34.6666666666667, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37446; Mature: 37446
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFISTSIISLEFYKTSLKKSFIAISALPLLMSSMAWAQPDVVRLGNLKFAHYGAISYM CCEEEEHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEHHHHHHHH KEIAPKYNIKIEERMFAKGIDIAPAIVAGQIDIAASAVDAAIAARAQNIPIYVIAGFAKG HHHCCCCCCEEHHHHHHCCCCCCCHHEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCC GARIVIGNNSSIKSVADFKGKKVGVARGGAQELLLLAELDKYGLTWSDRPGKDVQIIYMA CCEEEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE YADLNQALQSGNLDAISQSEPHASQAINIGYGVELLKPYDTPVGVPIRALIMTEAMYKEK HHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHCC PEVAARVLKLFVDATNTFIQQPEIAEEYVRKEMFKNQITSQDYQDAIGNSPFSYDITVEH HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEE VQVTTDLMRKYGIGRMNNPPVAADWVKTDLLEAAKKSIGVNGS EHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIKFISTSIISLEFYKTSLKKSFIAISALPLLMSSMAWAQPDVVRLGNLKFAHYGAISYM CCEEEEHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEHHHHHHHH KEIAPKYNIKIEERMFAKGIDIAPAIVAGQIDIAASAVDAAIAARAQNIPIYVIAGFAKG HHHCCCCCCEEHHHHHHCCCCCCCHHEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCC GARIVIGNNSSIKSVADFKGKKVGVARGGAQELLLLAELDKYGLTWSDRPGKDVQIIYMA CCEEEEECCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE YADLNQALQSGNLDAISQSEPHASQAINIGYGVELLKPYDTPVGVPIRALIMTEAMYKEK HHHHHHHHHCCCCCCCCCCCCCHHHEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHCC PEVAARVLKLFVDATNTFIQQPEIAEEYVRKEMFKNQITSQDYQDAIGNSPFSYDITVEH HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEEEE VQVTTDLMRKYGIGRMNNPPVAADWVKTDLLEAAKKSIGVNGS EHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA