| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596441
Identifier: 51596441
GI number: 51596441
Start: 2493836
End: 2494165
Strand: Reverse
Name: 51596441
Synonym: YPTB2115
Alternate gene names: NA
Gene position: 2494165-2493836 (Counterclockwise)
Preceding gene: 51596442
Following gene: 51596438
Centisome position: 52.57
GC content: 37.88
Gene sequence:
>330_bases ATGGAATGTCCGGTGTGCAATAATACCCAGTTAGTGATGACTGAACGCAAAAGTATTGAGATAGACTATTGTCCAAATTG CCGTGGTGTTTGGTTGGATCGCGGGAAATTAGACAAGCTCATTGAAAAATCGGTAGAAAACTCACCAGCAACCTCATTCT CTGATGAGAGAGAGCATGGTAATCACGGATACTCAAAATCCAAGCACTACAGAAAAAAGGGTTCTTATCTCGTTTTTTTG ATTAGTCTTATTAAACAGCCCACGGTTGTAGACACTAGATATAATAATACGCCTAAAGCTAGGCGTATTATTATAAGTTT TTTTTGTTAA
Upstream 100 bases:
>100_bases CCACACTTACACATAATTACCTGGAATCATTGTCTAATTAAGGACAGTTTCTATATCGCACAAACTCAGGTCACGTTGAT TTAATGCGGAGATGAAAGCT
Downstream 100 bases:
>100_bases TTAACCACGATAGAAAACCTCAGCATAACGCTACCCTTTGTAGTGTTTCAGCCAATGCTCTTCGCAAGCCTCAACGGCCT TCTCCAAGATATGTGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MECPVCNNTQLVMTERKSIEIDYCPNCRGVWLDRGKLDKLIEKSVENSPATSFSDEREHGNHGYSKSKHYRKKGSYLVFL ISLIKQPTVVDTRYNNTPKARRIIISFFC
Sequences:
>Translated_109_residues MECPVCNNTQLVMTERKSIEIDYCPNCRGVWLDRGKLDKLIEKSVENSPATSFSDEREHGNHGYSKSKHYRKKGSYLVFL ISLIKQPTVVDTRYNNTPKARRIIISFFC >Mature_109_residues MECPVCNNTQLVMTERKSIEIDYCPNCRGVWLDRGKLDKLIEKSVENSPATSFSDEREHGNHGYSKSKHYRKKGSYLVFL ISLIKQPTVVDTRYNNTPKARRIIISFFC
Specific function: Unknown
COG id: COG3809
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12646; Mature: 12646
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECPVCNNTQLVMTERKSIEIDYCPNCRGVWLDRGKLDKLIEKSVENSPATSFSDEREHG CCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC NHGYSKSKHYRKKGSYLVFLISLIKQPTVVDTRYNNTPKARRIIISFFC CCCCCCCHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCHHEEEEEECC >Mature Secondary Structure MECPVCNNTQLVMTERKSIEIDYCPNCRGVWLDRGKLDKLIEKSVENSPATSFSDEREHG CCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC NHGYSKSKHYRKKGSYLVFLISLIKQPTVVDTRYNNTPKARRIIISFFC CCCCCCCHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA