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The map label for this gene is ychJ [C]

Identifier: 51596424

GI number: 51596424

Start: 2470699

End: 2471163

Strand: Reverse

Name: ychJ [C]

Synonym: YPTB2098

Alternate gene names: 51596424

Gene position: 2471163-2470699 (Counterclockwise)

Preceding gene: 51596427

Following gene: 51596423

Centisome position: 52.08

GC content: 47.31

Gene sequence:

>465_bases
TTGTCAGAACTGTGTCCTTGTGGCAGCATCCTTAATTACCACGAATGCTGCGGCCCCTACATCCTCGGCACTCAGGTTGC
AGCAAAACCGGCAATATTGATGCGCTCGCGCTATTGTGCTTATGTAGAAAAAAATGTGGATTATCTGATTGCTACCTGGC
ATCCAGACTGTCATGCACAGGAGTGGCGAGAAAGTATCATTCAAGGCTTTACCAAGACGGTGTGGCATGGGCTAACAGTT
ATTGCTGAGACTCCCGGTCGCCATCCTGATGAAGCTTTTGTGGAGTTTATTTCCCGTTTCACCGATGCAGATAATGCACA
GATAACGGCAATGCACGAACGTTCTCGCTTCCTACGTATAAAAGAACACTGGTACTATATTGACGGTATCCGCCCCTCTT
TGGGTAGAAACGATACATGTCTTTGCGGTTCGGGGAAAAAACACAAGAAATGCTGTGGCCGTTAA

Upstream 100 bases:

>100_bases
AGGTAAGATAGGCGTACATTGAGTACCACCATCCTATATAGCCCTACTCTGTAGTGATACGATAAGAGCGAGTGGCCTTG
CTGATTATTCTGGAGAAATT

Downstream 100 bases:

>100_bases
TTAAACTATTTCTTTATTGTTACTCCTAAAATATCAGACACTTACACAACATGAAATAATGTTAAGACAGGATTTACCAC
CTTATGCCACACCAGAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSELCPCGSILNYHECCGPYILGTQVAAKPAILMRSRYCAYVEKNVDYLIATWHPDCHAQEWRESIIQGFTKTVWHGLTV
IAETPGRHPDEAFVEFISRFTDADNAQITAMHERSRFLRIKEHWYYIDGIRPSLGRNDTCLCGSGKKHKKCCGR

Sequences:

>Translated_154_residues
MSELCPCGSILNYHECCGPYILGTQVAAKPAILMRSRYCAYVEKNVDYLIATWHPDCHAQEWRESIIQGFTKTVWHGLTV
IAETPGRHPDEAFVEFISRFTDADNAQITAMHERSRFLRIKEHWYYIDGIRPSLGRNDTCLCGSGKKHKKCCGR
>Mature_153_residues
SELCPCGSILNYHECCGPYILGTQVAAKPAILMRSRYCAYVEKNVDYLIATWHPDCHAQEWRESIIQGFTKTVWHGLTVI
AETPGRHPDEAFVEFISRFTDADNAQITAMHERSRFLRIKEHWYYIDGIRPSLGRNDTCLCGSGKKHKKCCGR

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=154, Percent_Identity=53.2467532467532, Blast_Score=170, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 17639; Mature: 17508

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELCPCGSILNYHECCGPYILGTQVAAKPAILMRSRYCAYVEKNVDYLIATWHPDCHAQ
CCCCCCCCCCCCHHHHCCCEEECCHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHH
EWRESIIQGFTKTVWHGLTVIAETPGRHPDEAFVEFISRFTDADNAQITAMHERSRFLRI
HHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHEEH
KEHWYYIDGIRPSLGRNDTCLCGSGKKHKKCCGR
HHHEEEECCCCCCCCCCCEEEECCCCCHHHHCCC
>Mature Secondary Structure 
SELCPCGSILNYHECCGPYILGTQVAAKPAILMRSRYCAYVEKNVDYLIATWHPDCHAQ
CCCCCCCCCCCHHHHCCCEEECCHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHH
EWRESIIQGFTKTVWHGLTVIAETPGRHPDEAFVEFISRFTDADNAQITAMHERSRFLRI
HHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHEEH
KEHWYYIDGIRPSLGRNDTCLCGSGKKHKKCCGR
HHHEEEECCCCCCCCCCCEEEECCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA