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The map label for this gene is cmoB [H]

Identifier: 51596358

GI number: 51596358

Start: 2396177

End: 2397148

Strand: Reverse

Name: cmoB [H]

Synonym: YPTB2032

Alternate gene names: 51596358

Gene position: 2397148-2396177 (Counterclockwise)

Preceding gene: 51596359

Following gene: 51596355

Centisome position: 50.52

GC content: 52.47

Gene sequence:

>972_bases
ATGATTGAATTTGGCGATTTTTATCGGCTGATTGCCAAAGGCCCATTAAGCCCATGGTTAGATATTCTGCCCGCACAGCT
CAGCGCCTGGCAGCGCGAATCGTTACACGGTAAATTTAAAACCTGGTTTAACGCCGTGGAACATTTGCCTCAACTGACGC
CCACCACACTGGATCTACACTCAGGCGTAAGGGCCGAAATGTCCCCGCCCATTTCGGCTGGGCAACGTGAAGGAATGGAG
AATATGCTGCGCGCCCTGATGCCTTGGCGCAAAGGCCCCTTCTCGCTATATGGGTTGGAGATCGATACCGAATGGCGTTC
AGATTGGAAGTGGCAACGGGTCTTGCCCCATATCAGCCCATTGGCAGGCCGTACTATTCTGGATGTCGGCTGCGGCAGCG
GTTACCACCTGTGGCGCATGATTGGTGAAGGTGCCCATCTGGCGGTCGGCATTGATCCAATGCAGCTATTTTTATGTCAG
TTTGAAGCGATCCGTAAGCTTTTGGGTGGCGATCAGCGAGCGCATGTCCTGCCTCTTGGCATTGAACAACTGCCGGAACT
GGCTGCTTTTGATACCGTGTTTTCCATGGGGGTGCTGTATCACCGCCGTTCGCCACTGGATCACCTCTATCAACTTAAAA
ACCAGTTAGTTACTGACGGAGAACTGGTGCTAGAGACACTGGTCGTCGAAGGGGACAGCCAACAAGTGTTGGTGCCAGGT
GATCGTTACGCGCAAATGCGCAATGTGTACTTTATTCCTTCGGCACCCGCCCTAAAAGCCTGGCTGGAGAAGTGTGGTTT
CGTTGATGTCAGAATAGCGGATATGGCCGTGACTACGACTGAAGAGCAGCGTCGTACTGATTGGATGACCAGTGAATCAT
TAGCCGAGTTCCTTGACCCGCACGATCACAGTAAAACGGTAGAAGGCTATCCAGCACCACTAAGAGCGGTGTTAATCGCC
CGTAAGCCATAA

Upstream 100 bases:

>100_bases
ACAAAAATCGTCTGCATCAGGCGGGGTTTGAACACGCGGAAGTCTGGTTCCAATGCTTTAATTTTGGTTCACTGATTGCC
CTGAAAGCAGGAGAGGCTCA

Downstream 100 bases:

>100_bases
GAAAATCCCCCAACTCACCCAGATGGGGGATACCGTTCGTTATATTCCAAACAAGTGGTGTTACTACAGGGCAAAACGCG
CGCATCCCCGAATTGACACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MIEFGDFYRLIAKGPLSPWLDILPAQLSAWQRESLHGKFKTWFNAVEHLPQLTPTTLDLHSGVRAEMSPPISAGQREGME
NMLRALMPWRKGPFSLYGLEIDTEWRSDWKWQRVLPHISPLAGRTILDVGCGSGYHLWRMIGEGAHLAVGIDPMQLFLCQ
FEAIRKLLGGDQRAHVLPLGIEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVTDGELVLETLVVEGDSQQVLVPG
DRYAQMRNVYFIPSAPALKAWLEKCGFVDVRIADMAVTTTEEQRRTDWMTSESLAEFLDPHDHSKTVEGYPAPLRAVLIA
RKP

Sequences:

>Translated_323_residues
MIEFGDFYRLIAKGPLSPWLDILPAQLSAWQRESLHGKFKTWFNAVEHLPQLTPTTLDLHSGVRAEMSPPISAGQREGME
NMLRALMPWRKGPFSLYGLEIDTEWRSDWKWQRVLPHISPLAGRTILDVGCGSGYHLWRMIGEGAHLAVGIDPMQLFLCQ
FEAIRKLLGGDQRAHVLPLGIEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVTDGELVLETLVVEGDSQQVLVPG
DRYAQMRNVYFIPSAPALKAWLEKCGFVDVRIADMAVTTTEEQRRTDWMTSESLAEFLDPHDHSKTVEGYPAPLRAVLIA
RKP
>Mature_323_residues
MIEFGDFYRLIAKGPLSPWLDILPAQLSAWQRESLHGKFKTWFNAVEHLPQLTPTTLDLHSGVRAEMSPPISAGQREGME
NMLRALMPWRKGPFSLYGLEIDTEWRSDWKWQRVLPHISPLAGRTILDVGCGSGYHLWRMIGEGAHLAVGIDPMQLFLCQ
FEAIRKLLGGDQRAHVLPLGIEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVTDGELVLETLVVEGDSQQVLVPG
DRYAQMRNVYFIPSAPALKAWLEKCGFVDVRIADMAVTTTEEQRRTDWMTSESLAEFLDPHDHSKTVEGYPAPLRAVLIA
RKP

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family [H]

Homologues:

Organism=Escherichia coli, GI1788178, Length=323, Percent_Identity=76.7801857585139, Blast_Score=521, Evalue=1e-149,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010017 [H]

Pfam domain/function: PF08003 Methyltransf_9 [H]

EC number: NA

Molecular weight: Translated: 36593; Mature: 36593

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFGDFYRLIAKGPLSPWLDILPAQLSAWQRESLHGKFKTWFNAVEHLPQLTPTTLDLH
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEHHC
SGVRAEMSPPISAGQREGMENMLRALMPWRKGPFSLYGLEIDTEWRSDWKWQRVLPHISP
CCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHCCCCCC
LAGRTILDVGCGSGYHLWRMIGEGAHLAVGIDPMQLFLCQFEAIRKLLGGDQRAHVLPLG
CCCCEEEEECCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEECC
IEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVTDGELVLETLVVEGDSQQVLVPG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECC
DRYAQMRNVYFIPSAPALKAWLEKCGFVDVRIADMAVTTTEEQRRTDWMTSESLAEFLDP
HHHHHHCCEEECCCCHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHCCCHHHHHHHCCC
HDHSKTVEGYPAPLRAVLIARKP
CCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MIEFGDFYRLIAKGPLSPWLDILPAQLSAWQRESLHGKFKTWFNAVEHLPQLTPTTLDLH
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCEEHHC
SGVRAEMSPPISAGQREGMENMLRALMPWRKGPFSLYGLEIDTEWRSDWKWQRVLPHISP
CCCCCCCCCCCCCHHHCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHCCCCCC
LAGRTILDVGCGSGYHLWRMIGEGAHLAVGIDPMQLFLCQFEAIRKLLGGDQRAHVLPLG
CCCCEEEEECCCCCHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEECC
IEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVTDGELVLETLVVEGDSQQVLVPG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECC
DRYAQMRNVYFIPSAPALKAWLEKCGFVDVRIADMAVTTTEEQRRTDWMTSESLAEFLDP
HHHHHHCCEEECCCCHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHHCCCHHHHHHHCCC
HDHSKTVEGYPAPLRAVLIARKP
CCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA