| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is mlc [C]
Identifier: 51596344
GI number: 51596344
Start: 2375106
End: 2376260
Strand: Direct
Name: mlc [C]
Synonym: YPTB2018
Alternate gene names: 51596344
Gene position: 2375106-2376260 (Clockwise)
Preceding gene: 51596343
Following gene: 51596345
Centisome position: 50.06
GC content: 55.06
Gene sequence:
>1155_bases TTGAAGAAGCGGGTCTGCGCTGGGATTAATATTAAGGACACCATGAATATCCGACCTGAACGGCTTGAACTGCGCGGATC ACAGCGCTTACTGCTGGAACTGATCCGCCGTCATGCGCCCGTCACACGTGCGGAGTTAGCGCGCTTGTCGAACCTGACCG CGGGCGCGATCACCCAACAGTGCCGGGAATTAATCTTTGCCGGTTTGGTGGTGGAAGGGGAACGCAATACCGGGCAGCGT GGTCAGCCATCGCTGCCGTTGCGTCTCAACCCTGGTGGTGGTTGCGCTATTGGTTTGTCGTTCAGCCCCGGTTTTATCGA TATGACCGTGGTCGATCTCAGTGGCCGCCAGTTATTATCGGTTGCCGAGCCTCATCAGGAAAATCAGCCGCTGACTGCGA CGCTTTGCCAAATCAAAACGCTGGTCGAACAGACGCTGAAGAAACGCCAGCTACAGCACGCACGTATTATCGGCATTGGC TATGCGGTACCAGGTTTTCTTAAGGCTGATGGGCACAAACGCCATTGTGTGCCGTGGCTGCATACTTGGCGAGAAGCGGA CCTCCAGCAGGTGTTTGCCGATAATCTGCCGTGGCCTACCCGGGTGGAGAACAATGCCAATGCTTCAGCTATCGGCGAAC TGTACAGCGGCGAGTGGAACAACTACAGCGATCTGACTTTTATCGACCTTGGCTATGGCATCGGCGCGGGTGTGATCTCT GGGCATAAGTTGTTGCGCGGTGGTTTTTTCAATGCTGGGGAAGTCGGCATGGCGTTCCCTTCAGGTACACCGCGTCCGTC ATATAAAGATTTACTGGCTACGCTGGAGCGTGAGGGATTTAGCGAAACGCAACTGCCAGTGCTGAGCGCTGGGCGGCATC CGGTGTTGGAAAAGTGGTTTGAACGCTGCTGTGATCAAGTGCAACAAACGGTGTTTGGTTGTGTGCAATGGGTTGACCCA CAACTGATTGTACTGGGGGGGGCTATGCCGAAGCCCATCATCAGCCGCCTTGTGCAGGAAATAAGCCAACGCCTGAATAC CTGCCTGGATCCTGAGCGTCCAAAAGTAACCTTAGCCGCTTCGTCAATGGGGGCGGAAAGCGCTTCACGTGGCGCGGCGA TGATCCCTCTGTATCAGGTGATTAATGAGGATTAA
Upstream 100 bases:
>100_bases AAATTCGGGTATGATAGTCGCCCGGAGATCCTAAGCTGGCTGCGTGAAGGGCTGATCGACATGCTTAGCCACGATGATAT TCCATATCTTCAGGCGCTAA
Downstream 100 bases:
>100_bases GGGGGAGATATACGGCCCTAAAAATTCTGTGAAGCTGAAGGATTGGACACAATACGATTAGAGCCTGTAAGTGACTGATG CAAGCAACCTACTGGTATAA
Product: transcriptional regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKKRVCAGINIKDTMNIRPERLELRGSQRLLLELIRRHAPVTRAELARLSNLTAGAITQQCRELIFAGLVVEGERNTGQR GQPSLPLRLNPGGGCAIGLSFSPGFIDMTVVDLSGRQLLSVAEPHQENQPLTATLCQIKTLVEQTLKKRQLQHARIIGIG YAVPGFLKADGHKRHCVPWLHTWREADLQQVFADNLPWPTRVENNANASAIGELYSGEWNNYSDLTFIDLGYGIGAGVIS GHKLLRGGFFNAGEVGMAFPSGTPRPSYKDLLATLEREGFSETQLPVLSAGRHPVLEKWFERCCDQVQQTVFGCVQWVDP QLIVLGGAMPKPIISRLVQEISQRLNTCLDPERPKVTLAASSMGAESASRGAAMIPLYQVINED
Sequences:
>Translated_384_residues MKKRVCAGINIKDTMNIRPERLELRGSQRLLLELIRRHAPVTRAELARLSNLTAGAITQQCRELIFAGLVVEGERNTGQR GQPSLPLRLNPGGGCAIGLSFSPGFIDMTVVDLSGRQLLSVAEPHQENQPLTATLCQIKTLVEQTLKKRQLQHARIIGIG YAVPGFLKADGHKRHCVPWLHTWREADLQQVFADNLPWPTRVENNANASAIGELYSGEWNNYSDLTFIDLGYGIGAGVIS GHKLLRGGFFNAGEVGMAFPSGTPRPSYKDLLATLEREGFSETQLPVLSAGRHPVLEKWFERCCDQVQQTVFGCVQWVDP QLIVLGGAMPKPIISRLVQEISQRLNTCLDPERPKVTLAASSMGAESASRGAAMIPLYQVINED >Mature_384_residues MKKRVCAGINIKDTMNIRPERLELRGSQRLLLELIRRHAPVTRAELARLSNLTAGAITQQCRELIFAGLVVEGERNTGQR GQPSLPLRLNPGGGCAIGLSFSPGFIDMTVVDLSGRQLLSVAEPHQENQPLTATLCQIKTLVEQTLKKRQLQHARIIGIG YAVPGFLKADGHKRHCVPWLHTWREADLQQVFADNLPWPTRVENNANASAIGELYSGEWNNYSDLTFIDLGYGIGAGVIS GHKLLRGGFFNAGEVGMAFPSGTPRPSYKDLLATLEREGFSETQLPVLSAGRHPVLEKWFERCCDQVQQTVFGCVQWVDP QLIVLGGAMPKPIISRLVQEISQRLNTCLDPERPKVTLAASSMGAESASRGAAMIPLYQVINED
Specific function: May Be A Regulator In Specific Sugar Metabolism. May Influence The Rate Of Glucose Uptake Or Glycolysis In Cells In The Rich Medium. [C]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
Organism=Escherichia coli, GI1787878, Length=228, Percent_Identity=27.1929824561404, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1786891, Length=230, Percent_Identity=25.2173913043478, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 - InterPro: IPR018335 - InterPro: IPR011991 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: NA
Molecular weight: Translated: 42248; Mature: 42248
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRVCAGINIKDTMNIRPERLELRGSQRLLLELIRRHAPVTRAELARLSNLTAGAITQQ CCCCEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH CRELIFAGLVVEGERNTGQRGQPSLPLRLNPGGGCAIGLSFSPGFIDMTVVDLSGRQLLS HHHHHHHHEEEECCCCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEEEECCCCHHHH VAEPHQENQPLTATLCQIKTLVEQTLKKRQLQHARIIGIGYAVPGFLKADGHKRHCVPWL HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEECCCCCCCCCHHH HTWREADLQQVFADNLPWPTRVENNANASAIGELYSGEWNNYSDLTFIDLGYGIGAGVIS HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH GHKLLRGGFFNAGEVGMAFPSGTPRPSYKDLLATLEREGFSETQLPVLSAGRHPVLEKWF CHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHH ERCCDQVQQTVFGCVQWVDPQLIVLGGAMPKPIISRLVQEISQRLNTCLDPERPKVTLAA HHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE SSMGAESASRGAAMIPLYQVINED CCCCCCHHCCCCCHHHHHHHHCCC >Mature Secondary Structure MKKRVCAGINIKDTMNIRPERLELRGSQRLLLELIRRHAPVTRAELARLSNLTAGAITQQ CCCCEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH CRELIFAGLVVEGERNTGQRGQPSLPLRLNPGGGCAIGLSFSPGFIDMTVVDLSGRQLLS HHHHHHHHEEEECCCCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEEEEECCCCHHHH VAEPHQENQPLTATLCQIKTLVEQTLKKRQLQHARIIGIGYAVPGFLKADGHKRHCVPWL HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEECCCCCCCCCHHH HTWREADLQQVFADNLPWPTRVENNANASAIGELYSGEWNNYSDLTFIDLGYGIGAGVIS HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH GHKLLRGGFFNAGEVGMAFPSGTPRPSYKDLLATLEREGFSETQLPVLSAGRHPVLEKWF CHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHH ERCCDQVQQTVFGCVQWVDPQLIVLGGAMPKPIISRLVQEISQRLNTCLDPERPKVTLAA HHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE SSMGAESASRGAAMIPLYQVINED CCCCCCHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]