| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is cusS [H]
Identifier: 51596318
GI number: 51596318
Start: 2347848
End: 2349239
Strand: Reverse
Name: cusS [H]
Synonym: YPTB1992
Alternate gene names: 51596318
Gene position: 2349239-2347848 (Counterclockwise)
Preceding gene: 51596319
Following gene: 51596317
Centisome position: 49.51
GC content: 51.51
Gene sequence:
>1392_bases GTGATCATGATTAAGCGTTCTATCTCTGGGCGGCTGGCGCTAATGTTTGCCTTGGCCTCCATACTGATAGTTTCGGCTCT CGGTATTGTACTGCGAAGCTCCTTGCATAATTCATTGCAAAAGCAGATGCATAACGAATTGCAATTCAGGGAGTCGCTGA TGGCACCGTGGATCCTCTCCCGTACCACGCTGGACGGCTGGCAAACGTTGGCGACCAAATTCACCGATTTGGCCGCTGCT GAGGGCGGCCGCGTACAATACTGGGTCCTCAGTGATGACCCCCAGCTTCAGGTAGGCGGCCCGGCACCCCGTGGTGTAAC CTGGGCTTCGTTAAGCAAAGGATTCAGCAAAGTACCCGGTGCGACAGACGAGTCATGCTCCCTATTTCTACTGATGTCGG AAATTCCTGCCCAAGGTGAGCGCCCCGCTCTGCGCTATGTGGTCGCTATCGATTCCACGCCGTATATGGGTACTCTGAAT GAATTTACCCGCACGCTGATCGTCATTACTGCGATTGGCGTCTTATTCGTGGCACTGCTGGGGTTCGTGATTGCCAGAAT AGGTATGCGCCCTGTTAATAAACTCAGCGAACAGGCCCAGCACCTTGCGCCAGGAAATCACGGGCAGCGTCTGGATACCT TAACTCTGCCGGATGAACTGCAAAAACTGGCCGTCGCATTCAACGGCGTGCTCGAACGGCAGGAAATCGCCTGGCGGCAA CTTGAAAGTTTTAATGCTGATGTCGCACATGAACTGAGAACCCCGTTGACCAATCTGATGGGGCAAACGCAATTAGGTCT ATCTCGTAAACGTGAAACGCATGAGCTCGAAGATTTACTGGAGTCCAATCTGGAAGAACTCGAGAGAATGACCTCTATTG TTAACGATATGCTGTTCCTCTCCCATGCTCAAGCTGGGGAGCACGCAACCCAGTTAACCGACGTGTCTCTTCGGGAAGAG ACCTATAAGACCACGGAGTATGTAGAACCTTCATTTGCCGAAAAAAATTTGTCTATTCATGTTGAGGGAGATATCACTGC ACGCATTGATCGGCGGCTTTTCCACCGCTCACTGGCGAATCTGCTAGAAAACAGCGCCCGCCATGCTGTTACTGGTACTA CCGTGAAAGTGACGATCTCCAGAGAAAATAATCTGGCATCCATCGCGGTAGCCAACATTGGAGCTCCCATTGCGGCGGAA CATCTAAACCGTTTGTTTGAGCGTTTTTATCGTGTTGATTCTTCCCGTGCACGCAGTGACACACACCATGGACTCGGGCT CTCCATCGTCAGGGCGGTGGCGATAATGCATCGTGGAGATGTGTTTGCCAGTAGCCAGAATGGGATTAATACCTTTGGTC TGACCCTTGCAATAACTGACCCTTATATATAG
Upstream 100 bases:
>100_bases CGAAAATAGATACGCCCTACCCGGTCAAACTGCTGCATACAGTGCGAGGCATGGGGTATGTCCTTGAAACTCGCCCCGAT CGCCAGACTAAATAGAGAGA
Downstream 100 bases:
>100_bases ACAGTGAGTCCGTTGAAAAAGAAATGAGTCGTTATGTGAAGTCTGGCCTGGCTGAGCGAGGGTAACGTCTATGACAGTGT ATTTTTGCATACAGGTTTAA
Product: two-component system sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MIMIKRSISGRLALMFALASILIVSALGIVLRSSLHNSLQKQMHNELQFRESLMAPWILSRTTLDGWQTLATKFTDLAAA EGGRVQYWVLSDDPQLQVGGPAPRGVTWASLSKGFSKVPGATDESCSLFLLMSEIPAQGERPALRYVVAIDSTPYMGTLN EFTRTLIVITAIGVLFVALLGFVIARIGMRPVNKLSEQAQHLAPGNHGQRLDTLTLPDELQKLAVAFNGVLERQEIAWRQ LESFNADVAHELRTPLTNLMGQTQLGLSRKRETHELEDLLESNLEELERMTSIVNDMLFLSHAQAGEHATQLTDVSLREE TYKTTEYVEPSFAEKNLSIHVEGDITARIDRRLFHRSLANLLENSARHAVTGTTVKVTISRENNLASIAVANIGAPIAAE HLNRLFERFYRVDSSRARSDTHHGLGLSIVRAVAIMHRGDVFASSQNGINTFGLTLAITDPYI
Sequences:
>Translated_463_residues MIMIKRSISGRLALMFALASILIVSALGIVLRSSLHNSLQKQMHNELQFRESLMAPWILSRTTLDGWQTLATKFTDLAAA EGGRVQYWVLSDDPQLQVGGPAPRGVTWASLSKGFSKVPGATDESCSLFLLMSEIPAQGERPALRYVVAIDSTPYMGTLN EFTRTLIVITAIGVLFVALLGFVIARIGMRPVNKLSEQAQHLAPGNHGQRLDTLTLPDELQKLAVAFNGVLERQEIAWRQ LESFNADVAHELRTPLTNLMGQTQLGLSRKRETHELEDLLESNLEELERMTSIVNDMLFLSHAQAGEHATQLTDVSLREE TYKTTEYVEPSFAEKNLSIHVEGDITARIDRRLFHRSLANLLENSARHAVTGTTVKVTISRENNLASIAVANIGAPIAAE HLNRLFERFYRVDSSRARSDTHHGLGLSIVRAVAIMHRGDVFASSQNGINTFGLTLAITDPYI >Mature_463_residues MIMIKRSISGRLALMFALASILIVSALGIVLRSSLHNSLQKQMHNELQFRESLMAPWILSRTTLDGWQTLATKFTDLAAA EGGRVQYWVLSDDPQLQVGGPAPRGVTWASLSKGFSKVPGATDESCSLFLLMSEIPAQGERPALRYVVAIDSTPYMGTLN EFTRTLIVITAIGVLFVALLGFVIARIGMRPVNKLSEQAQHLAPGNHGQRLDTLTLPDELQKLAVAFNGVLERQEIAWRQ LESFNADVAHELRTPLTNLMGQTQLGLSRKRETHELEDLLESNLEELERMTSIVNDMLFLSHAQAGEHATQLTDVSLREE TYKTTEYVEPSFAEKNLSIHVEGDITARIDRRLFHRSLANLLENSARHAVTGTTVKVTISRENNLASIAVANIGAPIAAE HLNRLFERFYRVDSSRARSDTHHGLGLSIVRAVAIMHRGDVFASSQNGINTFGLTLAITDPYI
Specific function: Member of the two-component regulatory system CusS/CusR. Copper ion sensor. Could also be a silver ion sensor. Probably activates CusR by phosphorylation [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=322, Percent_Identity=35.0931677018634, Blast_Score=207, Evalue=1e-54, Organism=Escherichia coli, GI1788279, Length=316, Percent_Identity=30.379746835443, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1788393, Length=259, Percent_Identity=31.2741312741313, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1786600, Length=250, Percent_Identity=28.8, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1787894, Length=305, Percent_Identity=27.8688524590164, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1790346, Length=262, Percent_Identity=27.8625954198473, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1789403, Length=289, Percent_Identity=26.643598615917, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI145693157, Length=212, Percent_Identity=27.3584905660377, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790551, Length=313, Percent_Identity=28.4345047923323, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786912, Length=254, Percent_Identity=26.7716535433071, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790861, Length=233, Percent_Identity=25.3218884120172, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR006290 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51225; Mature: 51225
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMIKRSISGRLALMFALASILIVSALGIVLRSSLHNSLQKQMHNELQFRESLMAPWILS CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RTTLDGWQTLATKFTDLAAAEGGRVQYWVLSDDPQLQVGGPAPRGVTWASLSKGFSKVPG HCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHCCHHHCCC ATDESCSLFLLMSEIPAQGERPALRYVVAIDSTPYMGTLNEFTRTLIVITAIGVLFVALL CCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GFVIARIGMRPVNKLSEQAQHLAPGNHGQRLDTLTLPDELQKLAVAFNGVLERQEIAWRQ HHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECEECCHHHHHHHHHHHHHHHHHHHHHHHH LESFNADVAHELRTPLTNLMGQTQLGLSRKRETHELEDLLESNLEELERMTSIVNDMLFL HHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHAQAGEHATQLTDVSLREETYKTTEYVEPSFAEKNLSIHVEGDITARIDRRLFHRSLAN HHHCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHH LLENSARHAVTGTTVKVTISRENNLASIAVANIGAPIAAEHLNRLFERFYRVDSSRARSD HHHCCCCCEEECCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCC THHGLGLSIVRAVAIMHRGDVFASSQNGINTFGLTLAITDPYI CCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEECCCCC >Mature Secondary Structure MIMIKRSISGRLALMFALASILIVSALGIVLRSSLHNSLQKQMHNELQFRESLMAPWILS CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH RTTLDGWQTLATKFTDLAAAEGGRVQYWVLSDDPQLQVGGPAPRGVTWASLSKGFSKVPG HCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHCCHHHCCC ATDESCSLFLLMSEIPAQGERPALRYVVAIDSTPYMGTLNEFTRTLIVITAIGVLFVALL CCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GFVIARIGMRPVNKLSEQAQHLAPGNHGQRLDTLTLPDELQKLAVAFNGVLERQEIAWRQ HHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECEECCHHHHHHHHHHHHHHHHHHHHHHHH LESFNADVAHELRTPLTNLMGQTQLGLSRKRETHELEDLLESNLEELERMTSIVNDMLFL HHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SHAQAGEHATQLTDVSLREETYKTTEYVEPSFAEKNLSIHVEGDITARIDRRLFHRSLAN HHHCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHH LLENSARHAVTGTTVKVTISRENNLASIAVANIGAPIAAEHLNRLFERFYRVDSSRARSD HHHCCCCCEEECCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCC THHGLGLSIVRAVAIMHRGDVFASSQNGINTFGLTLAITDPYI CCCCCHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]