| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596316
Identifier: 51596316
GI number: 51596316
Start: 2346624
End: 2347094
Strand: Reverse
Name: 51596316
Synonym: YPTB1990
Alternate gene names: NA
Gene position: 2347094-2346624 (Counterclockwise)
Preceding gene: 51596317
Following gene: 51596315
Centisome position: 49.47
GC content: 53.93
Gene sequence:
>471_bases ATGAAAGTTTTCCTGATCACACTGGCTGCGCTTTTACTGCCCGGTACGCAAGCGCTTGCTGCTGCGCAGGCGGCAGTGAC CGTCAGTCCTGCGGGTTCACAACCTACGACTATTGGTGCACCGGAATCTTTTACCGGTACAGCAAAAGTTGACTCACGGT TTAAAGGCACCGCCCCAGCCCGAATTTCCGGCGGTACCGTCTCATTCGAAGCCGGAGCACGAACAGCATGGCACACGCAT CCCCTTGGACAGACACTTATTGTTTCTTCTGGTACCGGCTGGGTACAGGAATGGGAGGGCGCCGCTCAGCAAATCAAAAC CGGTGATGTCGTGTGGATCCCACCGGGTGTTAAACACTGGCATGGCGCATCCGCAAAAGAGTCAATGGTGCATATTGCTG TTTCAGAATCACTGGACGGTAACACTGTGACGTGGATGGAAAAAGTCACAGACGGCCAGTACCCACAATAA
Upstream 100 bases:
>100_bases AACGGCGATATCCATTGCAAAAGAGGTATTTAAAGAAGGGAAATAGTTTTTATCTTCAATGGGTTAATTAGAATATCTCA CGTTAAAGGATTGAATCGAT
Downstream 100 bases:
>100_bases TAAAATGCCATTTTTGCATTCCCGCCTGAAACAGAACTACCCCGAGATATTCATGAATGGCGGTTTAGCGAAAGACATTG AGCTCAAACATTTTATTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; Transcriptional Regulator; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Barrel; 4-Carboxymuconolactone Decarboxylase; Cupin Domain-Containing Protein; Cupin Family Protein; Cupin Region; Cupin Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Cupin 2 Barrel Domain-Containing Protein; Conserved Protein; RmlC-Type Cupin; Double-Stranded Beta-Helix-Like Protein; ABC-2 Type Transporter; Double-Stranded Beta-Helix Protein; Secreted Protein; Exported RmlC-Type Cupin
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKVFLITLAALLLPGTQALAAAQAAVTVSPAGSQPTTIGAPESFTGTAKVDSRFKGTAPARISGGTVSFEAGARTAWHTH PLGQTLIVSSGTGWVQEWEGAAQQIKTGDVVWIPPGVKHWHGASAKESMVHIAVSESLDGNTVTWMEKVTDGQYPQ
Sequences:
>Translated_156_residues MKVFLITLAALLLPGTQALAAAQAAVTVSPAGSQPTTIGAPESFTGTAKVDSRFKGTAPARISGGTVSFEAGARTAWHTH PLGQTLIVSSGTGWVQEWEGAAQQIKTGDVVWIPPGVKHWHGASAKESMVHIAVSESLDGNTVTWMEKVTDGQYPQ >Mature_156_residues MKVFLITLAALLLPGTQALAAAQAAVTVSPAGSQPTTIGAPESFTGTAKVDSRFKGTAPARISGGTVSFEAGARTAWHTH PLGQTLIVSSGTGWVQEWEGAAQQIKTGDVVWIPPGVKHWHGASAKESMVHIAVSESLDGNTVTWMEKVTDGQYPQ
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16262; Mature: 16262
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFLITLAALLLPGTQALAAAQAAVTVSPAGSQPTTIGAPESFTGTAKVDSRFKGTAPA CEEHHHHHHHHHCCCCHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC RISGGTVSFEAGARTAWHTHPLGQTLIVSSGTGWVQEWEGAAQQIKTGDVVWIPPGVKHW EECCCEEEECCCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCC HGASAKESMVHIAVSESLDGNTVTWMEKVTDGQYPQ CCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MKVFLITLAALLLPGTQALAAAQAAVTVSPAGSQPTTIGAPESFTGTAKVDSRFKGTAPA CEEHHHHHHHHHCCCCHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC RISGGTVSFEAGARTAWHTHPLGQTLIVSSGTGWVQEWEGAAQQIKTGDVVWIPPGVKHW EECCCEEEECCCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCC HGASAKESMVHIAVSESLDGNTVTWMEKVTDGQYPQ CCCCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA