| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is mmlH [H]
Identifier: 51596256
GI number: 51596256
Start: 2266894
End: 2268123
Strand: Reverse
Name: mmlH [H]
Synonym: YPTB1930
Alternate gene names: 51596256
Gene position: 2268123-2266894 (Counterclockwise)
Preceding gene: 51596257
Following gene: 51596255
Centisome position: 47.8
GC content: 50.73
Gene sequence:
>1230_bases ATGCGTTGGTTTAGCGATCTCAACCAGACAGAAAGAAAAACTTTCATTGCTGCTTTTGGCGGTTGGGCATTGGATGCGCT AGATTTCATGGTTTTTACATTCGTGATTGCTACGCTGATGGCTCTCTGGCAAATCGACGCAGGCCAGGCCGGAATGCTGA GCACCGTCACCCTGCTTTTCTCCGCTATTGGTGGCTGGGGTGCAGGTATCCTTGCTGATCGTTATGGCAGGGTGCGTATC CTGCAAATAACTATTTTATGGTTCTCCTTATGTACGGTACTCATCGGATTTGCTCAGAACTTCGAACACGTTTTCATCCT ACGCGCGCTACAAGGTTTAGGTTTTGGTGGTGAATGGGCCGTAGGTTCTGTATTGATGGGGGAAATCGTCCGCGCCGAAC ATCGCGGGAAAGCCGTAGGCACCGTGCAAAGTGGATGGGCGATTGGTTGGGGTGCAGCAGCCTTGCTTTACACGCTAATG TTCTCGGTACTATCAGAGGAGTGGGCGTGGCGCGCATTATTCTGGATTGGTGTGCTTCCCGCCCTTTTAGTACTCTACAT ACGTAAAAACGTCCCAGAACCCGCGTTATTCCTGAAATCCCGCCACGAGCAGCAAGCCAAGGATCGACGCGTTTCTTCCT TCGCCATTTTCTCCCCCGCGCTACTCAAGACCACCGTTCTGGCTTCTTTACTCTGTACCGGAGTGCAAGGCGGCTACTAC GCCATCACAACTTGGCTGCCCACTTTTCTCAAACTCGAACGCAATCTCTCGGTGATCGGTACTGGTGGGTATCTCATGGT GATTATATTTGGCTCTTTCGTCGGCTATATTTGTGGTGCTTATCTCACCGACAAACTTGGGCGACGGGCAAATCTGATTA TCTTCTCACTGCTGTCGTGTATAACAATTTTTGCTTATACCCAACTTACGCTGACCAACACGCAGATGCTCGTTCTGGGA TTCCCACTCGGCTTTTCGGCATCCGGGATCTTCAGCGGCATGGGTGCCTTTCTCACTGAGCTTTTTCCTTCGGCGGTACG TGCTACAGGACAAGGTTTTACCTATAGTTTTGGTCGTGCCGTCGGTGCACTCTTTCCGGGGCTGGTCGGCTATCTGAGTC AGTCAAGCAGTCTGGCATTTGCCATTGGAGTCTTCGCTGGCAGTGCCTATTGCATCGTATTGGTAATGAGCCTATTGCTG CCCGAGACCAAAAATAAACAGCTAGAATAA
Upstream 100 bases:
>100_bases TGGTCGATAACCCTGCTCGTCTATATGATTTTTAAAAATAACAAAATAACTTGTGAGGTGCTCACAAGAGTTAAAAAGCC AGTCTGTAAAGGAGATATTT
Downstream 100 bases:
>100_bases GTGACGATTTATGGCCATGAGCATCAGACTGTTTCTCTGATATTTATGCTTCTAAGCTGCCTGTACAACAGTGAACAGAA AGCAACGCATCCGTTTGGAT
Product: MFS aromatic acid symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLFSAIGGWGAGILADRYGRVRI LQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWAVGSVLMGEIVRAEHRGKAVGTVQSGWAIGWGAAALLYTLM FSVLSEEWAWRALFWIGVLPALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKTTVLASLLCTGVQGGYY AITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTDKLGRRANLIIFSLLSCITIFAYTQLTLTNTQMLVLG FPLGFSASGIFSGMGAFLTELFPSAVRATGQGFTYSFGRAVGALFPGLVGYLSQSSSLAFAIGVFAGSAYCIVLVMSLLL PETKNKQLE
Sequences:
>Translated_409_residues MRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLFSAIGGWGAGILADRYGRVRI LQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWAVGSVLMGEIVRAEHRGKAVGTVQSGWAIGWGAAALLYTLM FSVLSEEWAWRALFWIGVLPALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKTTVLASLLCTGVQGGYY AITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTDKLGRRANLIIFSLLSCITIFAYTQLTLTNTQMLVLG FPLGFSASGIFSGMGAFLTELFPSAVRATGQGFTYSFGRAVGALFPGLVGYLSQSSSLAFAIGVFAGSAYCIVLVMSLLL PETKNKQLE >Mature_409_residues MRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLFSAIGGWGAGILADRYGRVRI LQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWAVGSVLMGEIVRAEHRGKAVGTVQSGWAIGWGAAALLYTLM FSVLSEEWAWRALFWIGVLPALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKTTVLASLLCTGVQGGYY AITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTDKLGRRANLIIFSLLSCITIFAYTQLTLTNTQMLVLG FPLGFSASGIFSGMGAFLTELFPSAVRATGQGFTYSFGRAVGALFPGLVGYLSQSSSLAFAIGVFAGSAYCIVLVMSLLL PETKNKQLE
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=446, Percent_Identity=22.8699551569507, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI213021148, Length=445, Percent_Identity=25.8426966292135, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI87082404, Length=374, Percent_Identity=29.144385026738, Blast_Score=143, Evalue=2e-35, Organism=Escherichia coli, GI87082231, Length=464, Percent_Identity=27.3706896551724, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1790550, Length=432, Percent_Identity=26.3888888888889, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI1788292, Length=433, Percent_Identity=24.0184757505774, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87081723, Length=343, Percent_Identity=28.8629737609329, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87082159, Length=390, Percent_Identity=25.3846153846154, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789941, Length=443, Percent_Identity=26.6365688487585, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788942, Length=331, Percent_Identity=24.1691842900302, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32564663, Length=444, Percent_Identity=25, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44560; Mature: 44560
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLF CCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH SAIGGWGAGILADRYGRVRILQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWA HHHCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHH VGSVLMGEIVRAEHRGKAVGTVQSGWAIGWGAAALLYTLMFSVLSEEWAWRALFWIGVLP HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKTTVLASLLCTGVQGGYY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE AITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTDKLGRRANLIIFSLLSC EHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ITIFAYTQLTLTNTQMLVLGFPLGFSASGIFSGMGAFLTELFPSAVRATGQGFTYSFGRA HHHHHHHHHEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH VGALFPGLVGYLSQSSSLAFAIGVFAGSAYCIVLVMSLLLPETKNKQLE HHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRWFSDLNQTERKTFIAAFGGWALDALDFMVFTFVIATLMALWQIDAGQAGMLSTVTLLF CCCHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH SAIGGWGAGILADRYGRVRILQITILWFSLCTVLIGFAQNFEHVFILRALQGLGFGGEWA HHHCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHH VGSVLMGEIVRAEHRGKAVGTVQSGWAIGWGAAALLYTLMFSVLSEEWAWRALFWIGVLP HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLVLYIRKNVPEPALFLKSRHEQQAKDRRVSSFAIFSPALLKTTVLASLLCTGVQGGYY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE AITTWLPTFLKLERNLSVIGTGGYLMVIIFGSFVGYICGAYLTDKLGRRANLIIFSLLSC EHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ITIFAYTQLTLTNTQMLVLGFPLGFSASGIFSGMGAFLTELFPSAVRATGQGFTYSFGRA HHHHHHHHHEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH VGALFPGLVGYLSQSSSLAFAIGVFAGSAYCIVLVMSLLLPETKNKQLE HHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]