| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596254
Identifier: 51596254
GI number: 51596254
Start: 2265616
End: 2266089
Strand: Reverse
Name: 51596254
Synonym: YPTB1928
Alternate gene names: NA
Gene position: 2266089-2265616 (Counterclockwise)
Preceding gene: 51596255
Following gene: 51596252
Centisome position: 47.76
GC content: 41.77
Gene sequence:
>474_bases ATGTTTAACCAAAACATTCAATGCAAGAAAATTTTATCACTGTTTTTGGTTTTGTCTGGCTCTGCCTTTTTAAGCGGGTG TGTATACCATAATTATGGTAGCCCCCATATTAACGGCGTTATCACAGATCAAGGGCAAACATTGGCTGGCGTGAAAGTTT CTTTAGCGAATTTTGATCAAAAAGTACAGACAACCACCACCGATACCAAGGGACATTTCTCGTTTATTCCGCAAGGCGAG TGGAATGTTTTTATTCCCATTGGTCCACAAGATCGCATGAATAACTGGTCAATCATTATTGAACAAGGCCCGTTGGAGAT CACCGGATATAAGCGTTCTCACCTGGGTGGTGCTTTCTCTGGGTATTCATATCGTGATCATATTACGCTGGTTTGCGACG TGTCTCTGTCAAGAAAAGATATTGGCGACTCGGATAATAATCCTGTATGCAGGCCGGATATTGATAGCCAATAA
Upstream 100 bases:
>100_bases TGAACGCGACGCATTAGATCAACAGCAAGCAGCAGAATATATCCAGTCTTTACTACCCCCTAATAGTGATAAATAATTTA AAAAATAGGATTATTAATTA
Downstream 100 bases:
>100_bases TTTTGCTCTTGGGGCGTTTTTTAACCGATTGGATCGTTTTAACCTATAGAGTCGCCTTAACCGACGGAGAGAACTCAAGG AAACACGGTCAGGACAAAGT
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MFNQNIQCKKILSLFLVLSGSAFLSGCVYHNYGSPHINGVITDQGQTLAGVKVSLANFDQKVQTTTTDTKGHFSFIPQGE WNVFIPIGPQDRMNNWSIIIEQGPLEITGYKRSHLGGAFSGYSYRDHITLVCDVSLSRKDIGDSDNNPVCRPDIDSQ
Sequences:
>Translated_157_residues MFNQNIQCKKILSLFLVLSGSAFLSGCVYHNYGSPHINGVITDQGQTLAGVKVSLANFDQKVQTTTTDTKGHFSFIPQGE WNVFIPIGPQDRMNNWSIIIEQGPLEITGYKRSHLGGAFSGYSYRDHITLVCDVSLSRKDIGDSDNNPVCRPDIDSQ >Mature_157_residues MFNQNIQCKKILSLFLVLSGSAFLSGCVYHNYGSPHINGVITDQGQTLAGVKVSLANFDQKVQTTTTDTKGHFSFIPQGE WNVFIPIGPQDRMNNWSIIIEQGPLEITGYKRSHLGGAFSGYSYRDHITLVCDVSLSRKDIGDSDNNPVCRPDIDSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17355; Mature: 17355
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNQNIQCKKILSLFLVLSGSAFLSGCVYHNYGSPHINGVITDQGQTLAGVKVSLANFDQ CCCCCCCHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCEEEECCCCEEEEEEEEECCCCC KVQTTTTDTKGHFSFIPQGEWNVFIPIGPQDRMNNWSIIIEQGPLEITGYKRSHLGGAFS EEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCCCCC GYSYRDHITLVCDVSLSRKDIGDSDNNPVCRPDIDSQ CCCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure MFNQNIQCKKILSLFLVLSGSAFLSGCVYHNYGSPHINGVITDQGQTLAGVKVSLANFDQ CCCCCCCHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCEEEECCCCEEEEEEEEECCCCC KVQTTTTDTKGHFSFIPQGEWNVFIPIGPQDRMNNWSIIIEQGPLEITGYKRSHLGGAFS EEEEECCCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCCCCC GYSYRDHITLVCDVSLSRKDIGDSDNNPVCRPDIDSQ CCCCCCEEEEEEEEECCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA