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The map label for this gene is ycjN [C]

Identifier: 51596239

GI number: 51596239

Start: 2244985

End: 2246253

Strand: Direct

Name: ycjN [C]

Synonym: YPTB1913

Alternate gene names: 51596239

Gene position: 2244985-2246253 (Clockwise)

Preceding gene: 51596238

Following gene: 51596240

Centisome position: 47.32

GC content: 51.93

Gene sequence:

>1269_bases
ATGAGCATAAAAAAAATAGGTATCGCAGGTATTATCGGCACGTTGCTGATGGCGGGTAACGCCAGCGCACAGGAAACCCT
CCGTGTACTGCTCGAAGGGCACAGCACCAGCGACTCGATAAAAGCACTGTTACCCGAATTCGAAAAGCAGACCGGTATTA
AGGTTCAGGCAGAGATAGTACCTTACAGCGATCTGACCTCTAAAGCCCTGCTGGCCTTCTCCTCGCACAGTGGACGTTAC
GACGTGGTTATGGATGACTGGGTGCATGCGGTAGGTTACGCCTCTGCTGGTTATATCACACCTGTAGATCAGTGGATGGA
GAGTGATACCGCCTTCTACGATGGTGCGGATTTCGTCAAAAGCTATGTTGATACGCTGCGTTATAAAGACGGTTATTACG
GGCTGCCAGTCTATGGTGAAAGTACCTTCCTGATGTACCGCAAAGACCTGTTTGAACAGTACGGTATCGCCGTGCCGAAA
ACCTTTGATGAGCTGACCGCTGCGGCAAAAACTATCAAAGAGAAGACCGAAGGTAAGGTGGCGGGTATTACGCTCCGTGG
AGCTCAGGGGATCCAGAACACCTTTGCATGGGCGTCATTCCTCTGGGGTTACGGCGGCCAGTGGATTGACGACAACGGAA
AATCTGCAATTGCTTCGCCACAGGCGGTAGAAGCCACCAAGTCATTCGTCAATATCCTGAAAAACTACGGGCCGATCGGC
GCGGCTAACTTCGGCTGGCAGGAAAACCGCTTGGTATTCCAGCAGGGCAAAGCGGCAATGACTATCGATTCGACAGTGAA
CGGGGGCTTCAACGAAGACCCGAAAGAGTCCACGGTCGTCGGTAAAGTGGGCTATGCCCCGGTACCGGTACAGCCAGGCG
ATCATCCGGGTAACAGCGGCGCACTTCAGGTGCATGGCTTGTATATCTCCAGCGACAGTAAGAAGCAGGATGCTGCCTGG
AAATTTATCAGTTGGGCAACGGACAAACAGACGCAGATGAAGTCGGTCGAACTGAATCCTAACGCCGGTGTGAGTTCACT
CAGTGCCATCAACAGTGATGCCTTCACCAAGCGTTACGGGGCCTTTAAGGACGGTATGCTCGCAGCATTGCAAAACGGCA
ATGCGAAATACCTCCCAACCATTCCGCAGTCTACACAGATTATCAACATAACCGGTATTGCTCTATCCGAGGCACTGGCA
GGTACTCAGACAGTAGAAAATGCCCTTCAGCAAGCCAACACCCGTAATGATAAAGCGTTGTCCCGTTAA

Upstream 100 bases:

>100_bases
GCAATGAGGCACTGCGAATTACTGTTGCCATTATGGACTCTGCCCGTACCGGCGAAATTGTCCGGGTCTGACATTCTGAC
TGAATAAACCAGGTGATGAG

Downstream 100 bases:

>100_bases
TCGCTTTCCGTCAGTGCAGTTGCGCACTGACGGAAATGAAATTCTTACGCAGGTTTAGGTAAAACTATGAATGCAAAACT
CACGCAGCAGGCGTTTACTC

Product: ABC transporter, perplasmic sorbitol binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSIKKIGIAGIIGTLLMAGNASAQETLRVLLEGHSTSDSIKALLPEFEKQTGIKVQAEIVPYSDLTSKALLAFSSHSGRY
DVVMDDWVHAVGYASAGYITPVDQWMESDTAFYDGADFVKSYVDTLRYKDGYYGLPVYGESTFLMYRKDLFEQYGIAVPK
TFDELTAAAKTIKEKTEGKVAGITLRGAQGIQNTFAWASFLWGYGGQWIDDNGKSAIASPQAVEATKSFVNILKNYGPIG
AANFGWQENRLVFQQGKAAMTIDSTVNGGFNEDPKESTVVGKVGYAPVPVQPGDHPGNSGALQVHGLYISSDSKKQDAAW
KFISWATDKQTQMKSVELNPNAGVSSLSAINSDAFTKRYGAFKDGMLAALQNGNAKYLPTIPQSTQIINITGIALSEALA
GTQTVENALQQANTRNDKALSR

Sequences:

>Translated_422_residues
MSIKKIGIAGIIGTLLMAGNASAQETLRVLLEGHSTSDSIKALLPEFEKQTGIKVQAEIVPYSDLTSKALLAFSSHSGRY
DVVMDDWVHAVGYASAGYITPVDQWMESDTAFYDGADFVKSYVDTLRYKDGYYGLPVYGESTFLMYRKDLFEQYGIAVPK
TFDELTAAAKTIKEKTEGKVAGITLRGAQGIQNTFAWASFLWGYGGQWIDDNGKSAIASPQAVEATKSFVNILKNYGPIG
AANFGWQENRLVFQQGKAAMTIDSTVNGGFNEDPKESTVVGKVGYAPVPVQPGDHPGNSGALQVHGLYISSDSKKQDAAW
KFISWATDKQTQMKSVELNPNAGVSSLSAINSDAFTKRYGAFKDGMLAALQNGNAKYLPTIPQSTQIINITGIALSEALA
GTQTVENALQQANTRNDKALSR
>Mature_421_residues
SIKKIGIAGIIGTLLMAGNASAQETLRVLLEGHSTSDSIKALLPEFEKQTGIKVQAEIVPYSDLTSKALLAFSSHSGRYD
VVMDDWVHAVGYASAGYITPVDQWMESDTAFYDGADFVKSYVDTLRYKDGYYGLPVYGESTFLMYRKDLFEQYGIAVPKT
FDELTAAAKTIKEKTEGKVAGITLRGAQGIQNTFAWASFLWGYGGQWIDDNGKSAIASPQAVEATKSFVNILKNYGPIGA
ANFGWQENRLVFQQGKAAMTIDSTVNGGFNEDPKESTVVGKVGYAPVPVQPGDHPGNSGALQVHGLYISSDSKKQDAAWK
FISWATDKQTQMKSVELNPNAGVSSLSAINSDAFTKRYGAFKDGMLAALQNGNAKYLPTIPQSTQIINITGIALSEALAG
TQTVENALQQANTRNDKALSR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45558; Mature: 45426

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKKIGIAGIIGTLLMAGNASAQETLRVLLEGHSTSDSIKALLPEFEKQTGIKVQAEIV
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEE
PYSDLTSKALLAFSSHSGRYDVVMDDWVHAVGYASAGYITPVDQWMESDTAFYDGADFVK
CCCCHHHHHHEEEECCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHCCCCCEECCHHHHH
SYVDTLRYKDGYYGLPVYGESTFLMYRKDLFEQYGIAVPKTFDELTAAAKTIKEKTEGKV
HHHHHHHCCCCCCCCEEECCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCE
AGITLRGAQGIQNTFAWASFLWGYGGQWIDDNGKSAIASPQAVEATKSFVNILKNYGPIG
EEEEEECCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
AANFGWQENRLVFQQGKAAMTIDSTVNGGFNEDPKESTVVGKVGYAPVPVQPGDHPGNSG
CCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
ALQVHGLYISSDSKKQDAAWKFISWATDKQTQMKSVELNPNAGVSSLSAINSDAFTKRYG
EEEEEEEEEECCCCCCHHHHHEEEECCCCCHHHEEEEECCCCCHHHHHHHCCHHHHHHHC
AFKDGMLAALQNGNAKYLPTIPQSTQIINITGIALSEALAGTQTVENALQQANTRNDKAL
CCCCCHHHEEECCCEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHC
SR
CC
>Mature Secondary Structure 
SIKKIGIAGIIGTLLMAGNASAQETLRVLLEGHSTSDSIKALLPEFEKQTGIKVQAEIV
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEE
PYSDLTSKALLAFSSHSGRYDVVMDDWVHAVGYASAGYITPVDQWMESDTAFYDGADFVK
CCCCHHHHHHEEEECCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHCCCCCEECCHHHHH
SYVDTLRYKDGYYGLPVYGESTFLMYRKDLFEQYGIAVPKTFDELTAAAKTIKEKTEGKV
HHHHHHHCCCCCCCCEEECCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCE
AGITLRGAQGIQNTFAWASFLWGYGGQWIDDNGKSAIASPQAVEATKSFVNILKNYGPIG
EEEEEECCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
AANFGWQENRLVFQQGKAAMTIDSTVNGGFNEDPKESTVVGKVGYAPVPVQPGDHPGNSG
CCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
ALQVHGLYISSDSKKQDAAWKFISWATDKQTQMKSVELNPNAGVSSLSAINSDAFTKRYG
EEEEEEEEEECCCCCCHHHHHEEEECCCCCHHHEEEEECCCCCHHHHHHHCCHHHHHHHC
AFKDGMLAALQNGNAKYLPTIPQSTQIINITGIALSEALAGTQTVENALQQANTRNDKAL
CCCCCHHHEEECCCEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHC
SR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA