| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596232
Identifier: 51596232
GI number: 51596232
Start: 2237424
End: 2237687
Strand: Direct
Name: 51596232
Synonym: YPTB1902
Alternate gene names: NA
Gene position: 2237424-2237687 (Clockwise)
Preceding gene: 51596231
Following gene: 51596233
Centisome position: 47.16
GC content: 53.41
Gene sequence:
>264_bases ATGACAGATAACCCCGAGTGGGGCGAGGCAGAGTTTGCCCGCGCACGTCCTGCCACAGAGGTGTTTACCGAGTTGTTTGG TAAAGAGGGCGCAGAAAAGGTGATAAAAACCCGTGGCCGGCCAAAACTGGCAAACCCGAAAGAACCGGTTAAGCTACGGA TTGATCACGATGTGGTGGACGCCTATCGGGCGCAGGGTGATGGATGGCAAACCAAAATGAATGAGGCACTGCGCGATTAT GCTAAAACACATGGGATGCTGTGA
Upstream 100 bases:
>100_bases GTATTCACACCACGTAACGGCAAGGTGCATGTTATCAGCCTGCGTAAGGCCAATTCCCGTGAGGTAAAGCGATATGAACA AAAGAATCAGTAAAGTCACC
Downstream 100 bases:
>100_bases TTTATTAGGCGTTATTTTCAATAACCAATCAAAGCTCACTCAAAGAAGCCACTAAGAGGGACATTATGGCAAGCTGCATC CCCCCAAAGGTTCCCGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVKLRIDHDVVDAYRAQGDGWQTKMNEALRDY AKTHGML
Sequences:
>Translated_87_residues MTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVKLRIDHDVVDAYRAQGDGWQTKMNEALRDY AKTHGML >Mature_86_residues TDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVKLRIDHDVVDAYRAQGDGWQTKMNEALRDYA KTHGML
Specific function: Unknown
COG id: COG3514
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9886; Mature: 9755
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVKLRIDHDVVD CCCCCCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEECCHHHHH AYRAQGDGWQTKMNEALRDYAKTHGML HHHHCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVKLRIDHDVVD CCCCCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEECCHHHHH AYRAQGDGWQTKMNEALRDYAKTHGML HHHHCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA