| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yhhZ [H]
Identifier: 51596213
GI number: 51596213
Start: 2222344
End: 2222688
Strand: Reverse
Name: yhhZ [H]
Synonym: YPTB1881
Alternate gene names: 51596213
Gene position: 2222688-2222344 (Counterclockwise)
Preceding gene: 51596214
Following gene: 51596212
Centisome position: 46.85
GC content: 30.72
Gene sequence:
>345_bases ATGAGTTTTAATACCTATTTAAAATTAACAGGAAGTGAACAAGGATTAATCTCTGCTGGATGCAGTTCATTTGACTCGAT TGGAAATCGACATCAGAATGATCATGACGATGAAATTCAGATACTATCCTTAAATCACGCCATAACAAGAGAGCAACATT GTACACATCATCCTGTTGAATTTATCAAACCAATTGACAAATTATCACCACTAATGGCTATAGCCATATCCAATAATGAA ATATTAACCCCATCATTTTCAATTTATAGATTAAATCAATTTGGTGCTTTGGGAATATTTTATGAGATAAAATTAACTAA AGCTACGATAATAGATATCAGTTAA
Upstream 100 bases:
>100_bases ACATATCAAGTTAATATAAAATACTGAATTCGTATTTTATAAAAAAGAACACCACTCTTTATAAAATTAAGCCAAACAAC TGAGTCTATAAGGATATTTT
Downstream 100 bases:
>100_bases AATTACCCTCATGTAATAAATAATCATGGTGCAATACCGTTTGAAAAAATCTCGTTTATATATGAGTCAATATCCTGGCA ACATAAAACAGCAGGCACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTHHPVEFIKPIDKLSPLMAIAISNNE ILTPSFSIYRLNQFGALGIFYEIKLTKATIIDIS
Sequences:
>Translated_114_residues MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTHHPVEFIKPIDKLSPLMAIAISNNE ILTPSFSIYRLNQFGALGIFYEIKLTKATIIDIS >Mature_113_residues SFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTHHPVEFIKPIDKLSPLMAIAISNNEI LTPSFSIYRLNQFGALGIFYEIKLTKATIIDIS
Specific function: Unknown
COG id: COG3157
COG function: function code S; Hemolysin-coregulated protein (uncharacterized)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hcp1 family [H]
Homologues:
Organism=Escherichia coli, GI1789850, Length=109, Percent_Identity=44.954128440367, Blast_Score=86, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017728 - InterPro: IPR008514 [H]
Pfam domain/function: PF05638 DUF796 [H]
EC number: NA
Molecular weight: Translated: 12761; Mature: 12629
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTHHPVE CCCCEEEEEECCCCCEEECCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHH FIKPIDKLSPLMAIAISNNEILTPSFSIYRLNQFGALGIFYEIKLTKATIIDIS HHCCHHHCCCEEEEEECCCEEECCCEEEEEECCCCCEEEEEEEEEEEEEEEEEC >Mature Secondary Structure SFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTHHPVE CCCEEEEEECCCCCEEECCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHH FIKPIDKLSPLMAIAISNNEILTPSFSIYRLNQFGALGIFYEIKLTKATIIDIS HHCCHHHCCCEEEEEECCCEEECCCEEEEEECCCCCEEEEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]