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The map label for this gene is intD [C]

Identifier: 51596210

GI number: 51596210

Start: 2219041

End: 2219418

Strand: Direct

Name: intD [C]

Synonym: YPTB1875

Alternate gene names: 51596210

Gene position: 2219041-2219418 (Clockwise)

Preceding gene: 51596209

Following gene: 51596211

Centisome position: 46.77

GC content: 40.74

Gene sequence:

>378_bases
ATGAAACAGTCGCAGATATTACCTAGCCGTGTGACTTACATTAATACTAAGGGCAAAAAGAACAGAACCGTACCGATATC
TGAGAAACTATTTAAACGTATACCAAAAAATCGCGGTGCTTTATTCACTCCATCTTATGATGCATTTAAACATGCATTGA
AAAGGGCGGCTATTGAGTTGCCTAAAGGGCAACGCACACACGTACTCAGGCATACCTTTGCCAGTCACTTTATGATGGGC
GGCGGAAACATTTTAGTGCTGCAACAAATTCTCGGCCATAGCACTATTTTAATGACGATGAGATATGCACATTTTGCACC
CGATCACTTAGATGCGGCCATCGCTTTAAATTCTTATGACAAGTTAGTTATCGATTAG

Upstream 100 bases:

>100_bases
GCGGCTTTTAGTCTCCTGTGATGAGTCGGAAAATAAAAGCCTGGGAACCATCGTTCGCCTCTGTTTAGCTACAGGTGCCA
GGTGGGGAGAGGCACAGGAT

Downstream 100 bases:

>100_bases
AAAATTGTCAGTTTTGATGGCAGCAAAAACTAGCCACACGCAAACATACGCAGCGATACGCATTTGTAACCCATTGAACA
ACCTTAACTTGTTGATTTTA

Product: prophage integrase

Products: NA

Alternate protein names: Integrase Family Protein; Phage Integrase; Bacteriophage Integrase; Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Fels-2 Prophage Protein; P2-Like Phage Integrase; DNA Integration/Recombination/Invertion Protein; Integrase Bacteriophage Origin; Phage Integrase Family Site-Specific Recombinase; Bacteriophage; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKQSQILPSRVTYINTKGKKNRTVPISEKLFKRIPKNRGALFTPSYDAFKHALKRAAIELPKGQRTHVLRHTFASHFMMG
GGNILVLQQILGHSTILMTMRYAHFAPDHLDAAIALNSYDKLVID

Sequences:

>Translated_125_residues
MKQSQILPSRVTYINTKGKKNRTVPISEKLFKRIPKNRGALFTPSYDAFKHALKRAAIELPKGQRTHVLRHTFASHFMMG
GGNILVLQQILGHSTILMTMRYAHFAPDHLDAAIALNSYDKLVID
>Mature_125_residues
MKQSQILPSRVTYINTKGKKNRTVPISEKLFKRIPKNRGALFTPSYDAFKHALKRAAIELPKGQRTHVLRHTFASHFMMG
GGNILVLQQILGHSTILMTMRYAHFAPDHLDAAIALNSYDKLVID

Specific function: Integrase From The Cryptic Lambdoic Prophage Dlp12. Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From Th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14155; Mature: 14155

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSQILPSRVTYINTKGKKNRTVPISEKLFKRIPKNRGALFTPSYDAFKHALKRAAIEL
CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHCC
PKGQRTHVLRHTFASHFMMGGGNILVLQQILGHSTILMTMRYAHFAPDHLDAAIALNSYD
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHEEEECCCC
KLVID
EEEEC
>Mature Secondary Structure
MKQSQILPSRVTYINTKGKKNRTVPISEKLFKRIPKNRGALFTPSYDAFKHALKRAAIEL
CCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHCC
PKGQRTHVLRHTFASHFMMGGGNILVLQQILGHSTILMTMRYAHFAPDHLDAAIALNSYD
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHEEEECCCC
KLVID
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA