| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596192
Identifier: 51596192
GI number: 51596192
Start: 2202571
End: 2203626
Strand: Reverse
Name: 51596192
Synonym: YPTB1857
Alternate gene names: NA
Gene position: 2203626-2202571 (Counterclockwise)
Preceding gene: 51596193
Following gene: 51596191
Centisome position: 46.44
GC content: 49.05
Gene sequence:
>1056_bases ATGAAAAAAACCACCCGATTAAAGTACAACCAGTACCGCCAGCAGGTTGCTAGCCTGAACGGTTTGGACAATAAAGAGGA TATCAGCGCGAAATTTACCGTTGAGCCGTCTATTGCGCAAAAACTGGAAACCAAACAACAGGAGAGCAGTGTTTTCCTGT CCAAAATCAACATGTATCCAGTGGATGAGAAGGAGGGTGAAAAGGTTGGCTTAAGTATTGACCGCCCGATTGCCAGCACC ACAGATACCACGCAGAAAGAACGTGAAGCATCAGACCCTAGCGGTCTGGATGGGACAAAATACAACTGTACCCAGACTAA CTTTGATACCGCGCTGCCTTATATCAAATTGGATATGTGGGCTAAATTCCCTGATTTTCAAACTCGCATCCGTGATGCCA TTGTGAAACGCCAGGCACTGGATCGCATCATGATCGGCTTTAACGGTATCAAGCGGGTAAAAACCTCTGATCATACCGTT AATAAGCTATTGCAAGATGTCAACCGGGGCTGGCTGCAAAGCATTCGTGATGATGCGCCGGGCCAGATGATGGATAAGAT TGTTGATGATAAAGGCGATGTTATCTCGCCTAAAATCCGCATCGGCAAAGGCGGCGATTTCAATAATCTGGATGCGCTGG TGATGGCTGCAACCGATGAACTGATCGAGCCCTGGTTCCAGGAAGATACCGAGCTTGTCGCGATTACCGGCCGCCAGTTA CTGGCCGACAAATATTTTCCTATCGTCAACCAATCACAGCCGAACACAGAAGCGCTGGCCGCTGACTTGATTATCAGTCA GAAGCGTATCGGTGGTCTGCCCGCAGTACGTGCGCCGTCTTTCCCGCCTGATGCCATTTTTATCACCCGGCTAGATAACC TGTCTATTTACTGGCAGGACGGCACCCGCAGGCGCTCAATCATCGACAACCCACGCCGTGACCGTATTGAAAACTTTGAA TCGGTTAACGAGGCCTACGTGGTTGAAGATTTTGGCTGTGTGGCCCTGATTGAAAACATTGAGTTCGGTGATTTTTCCGT CCCAGCAGAGGGTTAA
Upstream 100 bases:
>100_bases TCGCGACTTCTCTCAACGCGAAAAATCAACCGGCAATGACAGCGCCATTCTGACTGATTGCTAACTCATTTCGCTTGCTA CGTTAAGGATTTAATTTCAC
Downstream 100 bases:
>100_bases TCCATTATGAGCAACCCCGTTCGCCGCCATCGGCTATTTGTCGCGGCTCAGCAATCATCATCACTGAGCGAGGCGGCAAG CCTCAGCCATGCCAGCAACT
Product: major capsid protein
Products: NA
Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Phage Capsid Protein; Capsid Proteins; Phage Capsid Protein; Capsid; Phage Gene; Phage-Related Capsid Completion Protein; Bacteriophage Capsid Protein; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Phage Protein; Bacteriophage Capsid Protein N; Capsid-Like Protein; Capsid Protein Phage Origin; Prophage; Phage P2 Capsid GpN-Like Protein; Phage Capsid Protein N; Minor Capsid / Capsid Protein N*; Phage Capsid-Like Protein; Phage-Related Capsid Protein; Prophage Capsid Protein; Bacteriophage Protein; Phage Capsid Family
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKKTTRLKYNQYRQQVASLNGLDNKEDISAKFTVEPSIAQKLETKQQESSVFLSKINMYPVDEKEGEKVGLSIDRPIAST TDTTQKEREASDPSGLDGTKYNCTQTNFDTALPYIKLDMWAKFPDFQTRIRDAIVKRQALDRIMIGFNGIKRVKTSDHTV NKLLQDVNRGWLQSIRDDAPGQMMDKIVDDKGDVISPKIRIGKGGDFNNLDALVMAATDELIEPWFQEDTELVAITGRQL LADKYFPIVNQSQPNTEALAADLIISQKRIGGLPAVRAPSFPPDAIFITRLDNLSIYWQDGTRRRSIIDNPRRDRIENFE SVNEAYVVEDFGCVALIENIEFGDFSVPAEG
Sequences:
>Translated_351_residues MKKTTRLKYNQYRQQVASLNGLDNKEDISAKFTVEPSIAQKLETKQQESSVFLSKINMYPVDEKEGEKVGLSIDRPIAST TDTTQKEREASDPSGLDGTKYNCTQTNFDTALPYIKLDMWAKFPDFQTRIRDAIVKRQALDRIMIGFNGIKRVKTSDHTV NKLLQDVNRGWLQSIRDDAPGQMMDKIVDDKGDVISPKIRIGKGGDFNNLDALVMAATDELIEPWFQEDTELVAITGRQL LADKYFPIVNQSQPNTEALAADLIISQKRIGGLPAVRAPSFPPDAIFITRLDNLSIYWQDGTRRRSIIDNPRRDRIENFE SVNEAYVVEDFGCVALIENIEFGDFSVPAEG >Mature_351_residues MKKTTRLKYNQYRQQVASLNGLDNKEDISAKFTVEPSIAQKLETKQQESSVFLSKINMYPVDEKEGEKVGLSIDRPIAST TDTTQKEREASDPSGLDGTKYNCTQTNFDTALPYIKLDMWAKFPDFQTRIRDAIVKRQALDRIMIGFNGIKRVKTSDHTV NKLLQDVNRGWLQSIRDDAPGQMMDKIVDDKGDVISPKIRIGKGGDFNNLDALVMAATDELIEPWFQEDTELVAITGRQL LADKYFPIVNQSQPNTEALAADLIISQKRIGGLPAVRAPSFPPDAIFITRLDNLSIYWQDGTRRRSIIDNPRRDRIENFE SVNEAYVVEDFGCVALIENIEFGDFSVPAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39617; Mature: 39617
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTTRLKYNQYRQQVASLNGLDNKEDISAKFTVEPSIAQKLETKQQESSVFLSKINMYP CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCC VDEKEGEKVGLSIDRPIASTTDTTQKEREASDPSGLDGTKYNCTQTNFDTALPYIKLDMW CCCCCCCEECCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECH AKFPDFQTRIRDAIVKRQALDRIMIGFNGIKRVKTSDHTVNKLLQDVNRGWLQSIRDDAP HCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC GQMMDKIVDDKGDVISPKIRIGKGGDFNNLDALVMAATDELIEPWFQEDTELVAITGRQL HHHHHHHHCCCCCEECCEEEECCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEECCHHH LADKYFPIVNQSQPNTEALAADLIISQKRIGGLPAVRAPSFPPDAIFITRLDNLSIYWQD HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEEECC GTRRRSIIDNPRRDRIENFESVNEAYVVEDFGCVALIENIEFGDFSVPAEG CCCCHHHHCCCCHHHHHHHHHCCCEEEEECCCCEEHEECCCCCCCCCCCCC >Mature Secondary Structure MKKTTRLKYNQYRQQVASLNGLDNKEDISAKFTVEPSIAQKLETKQQESSVFLSKINMYP CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCC VDEKEGEKVGLSIDRPIASTTDTTQKEREASDPSGLDGTKYNCTQTNFDTALPYIKLDMW CCCCCCCEECCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECH AKFPDFQTRIRDAIVKRQALDRIMIGFNGIKRVKTSDHTVNKLLQDVNRGWLQSIRDDAP HCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC GQMMDKIVDDKGDVISPKIRIGKGGDFNNLDALVMAATDELIEPWFQEDTELVAITGRQL HHHHHHHHCCCCCEECCEEEECCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEECCHHH LADKYFPIVNQSQPNTEALAADLIISQKRIGGLPAVRAPSFPPDAIFITRLDNLSIYWQD HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEEECC GTRRRSIIDNPRRDRIENFESVNEAYVVEDFGCVALIENIEFGDFSVPAEG CCCCHHHHCCCCHHHHHHHHHCCCEEEEECCCCEEHEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA