Definition Yersinia pseudotuberculosis IP 32953, complete genome.
Accession NC_006155
Length 4,744,671

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The map label for this gene is 51596192

Identifier: 51596192

GI number: 51596192

Start: 2202571

End: 2203626

Strand: Reverse

Name: 51596192

Synonym: YPTB1857

Alternate gene names: NA

Gene position: 2203626-2202571 (Counterclockwise)

Preceding gene: 51596193

Following gene: 51596191

Centisome position: 46.44

GC content: 49.05

Gene sequence:

>1056_bases
ATGAAAAAAACCACCCGATTAAAGTACAACCAGTACCGCCAGCAGGTTGCTAGCCTGAACGGTTTGGACAATAAAGAGGA
TATCAGCGCGAAATTTACCGTTGAGCCGTCTATTGCGCAAAAACTGGAAACCAAACAACAGGAGAGCAGTGTTTTCCTGT
CCAAAATCAACATGTATCCAGTGGATGAGAAGGAGGGTGAAAAGGTTGGCTTAAGTATTGACCGCCCGATTGCCAGCACC
ACAGATACCACGCAGAAAGAACGTGAAGCATCAGACCCTAGCGGTCTGGATGGGACAAAATACAACTGTACCCAGACTAA
CTTTGATACCGCGCTGCCTTATATCAAATTGGATATGTGGGCTAAATTCCCTGATTTTCAAACTCGCATCCGTGATGCCA
TTGTGAAACGCCAGGCACTGGATCGCATCATGATCGGCTTTAACGGTATCAAGCGGGTAAAAACCTCTGATCATACCGTT
AATAAGCTATTGCAAGATGTCAACCGGGGCTGGCTGCAAAGCATTCGTGATGATGCGCCGGGCCAGATGATGGATAAGAT
TGTTGATGATAAAGGCGATGTTATCTCGCCTAAAATCCGCATCGGCAAAGGCGGCGATTTCAATAATCTGGATGCGCTGG
TGATGGCTGCAACCGATGAACTGATCGAGCCCTGGTTCCAGGAAGATACCGAGCTTGTCGCGATTACCGGCCGCCAGTTA
CTGGCCGACAAATATTTTCCTATCGTCAACCAATCACAGCCGAACACAGAAGCGCTGGCCGCTGACTTGATTATCAGTCA
GAAGCGTATCGGTGGTCTGCCCGCAGTACGTGCGCCGTCTTTCCCGCCTGATGCCATTTTTATCACCCGGCTAGATAACC
TGTCTATTTACTGGCAGGACGGCACCCGCAGGCGCTCAATCATCGACAACCCACGCCGTGACCGTATTGAAAACTTTGAA
TCGGTTAACGAGGCCTACGTGGTTGAAGATTTTGGCTGTGTGGCCCTGATTGAAAACATTGAGTTCGGTGATTTTTCCGT
CCCAGCAGAGGGTTAA

Upstream 100 bases:

>100_bases
TCGCGACTTCTCTCAACGCGAAAAATCAACCGGCAATGACAGCGCCATTCTGACTGATTGCTAACTCATTTCGCTTGCTA
CGTTAAGGATTTAATTTCAC

Downstream 100 bases:

>100_bases
TCCATTATGAGCAACCCCGTTCGCCGCCATCGGCTATTTGTCGCGGCTCAGCAATCATCATCACTGAGCGAGGCGGCAAG
CCTCAGCCATGCCAGCAACT

Product: major capsid protein

Products: NA

Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Phage Capsid Protein; Capsid Proteins; Phage Capsid Protein; Capsid; Phage Gene; Phage-Related Capsid Completion Protein; Bacteriophage Capsid Protein; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Phage Protein; Bacteriophage Capsid Protein N; Capsid-Like Protein; Capsid Protein Phage Origin; Prophage; Phage P2 Capsid GpN-Like Protein; Phage Capsid Protein N; Minor Capsid / Capsid Protein N*; Phage Capsid-Like Protein; Phage-Related Capsid Protein; Prophage Capsid Protein; Bacteriophage Protein; Phage Capsid Family

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKKTTRLKYNQYRQQVASLNGLDNKEDISAKFTVEPSIAQKLETKQQESSVFLSKINMYPVDEKEGEKVGLSIDRPIAST
TDTTQKEREASDPSGLDGTKYNCTQTNFDTALPYIKLDMWAKFPDFQTRIRDAIVKRQALDRIMIGFNGIKRVKTSDHTV
NKLLQDVNRGWLQSIRDDAPGQMMDKIVDDKGDVISPKIRIGKGGDFNNLDALVMAATDELIEPWFQEDTELVAITGRQL
LADKYFPIVNQSQPNTEALAADLIISQKRIGGLPAVRAPSFPPDAIFITRLDNLSIYWQDGTRRRSIIDNPRRDRIENFE
SVNEAYVVEDFGCVALIENIEFGDFSVPAEG

Sequences:

>Translated_351_residues
MKKTTRLKYNQYRQQVASLNGLDNKEDISAKFTVEPSIAQKLETKQQESSVFLSKINMYPVDEKEGEKVGLSIDRPIAST
TDTTQKEREASDPSGLDGTKYNCTQTNFDTALPYIKLDMWAKFPDFQTRIRDAIVKRQALDRIMIGFNGIKRVKTSDHTV
NKLLQDVNRGWLQSIRDDAPGQMMDKIVDDKGDVISPKIRIGKGGDFNNLDALVMAATDELIEPWFQEDTELVAITGRQL
LADKYFPIVNQSQPNTEALAADLIISQKRIGGLPAVRAPSFPPDAIFITRLDNLSIYWQDGTRRRSIIDNPRRDRIENFE
SVNEAYVVEDFGCVALIENIEFGDFSVPAEG
>Mature_351_residues
MKKTTRLKYNQYRQQVASLNGLDNKEDISAKFTVEPSIAQKLETKQQESSVFLSKINMYPVDEKEGEKVGLSIDRPIAST
TDTTQKEREASDPSGLDGTKYNCTQTNFDTALPYIKLDMWAKFPDFQTRIRDAIVKRQALDRIMIGFNGIKRVKTSDHTV
NKLLQDVNRGWLQSIRDDAPGQMMDKIVDDKGDVISPKIRIGKGGDFNNLDALVMAATDELIEPWFQEDTELVAITGRQL
LADKYFPIVNQSQPNTEALAADLIISQKRIGGLPAVRAPSFPPDAIFITRLDNLSIYWQDGTRRRSIIDNPRRDRIENFE
SVNEAYVVEDFGCVALIENIEFGDFSVPAEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39617; Mature: 39617

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTRLKYNQYRQQVASLNGLDNKEDISAKFTVEPSIAQKLETKQQESSVFLSKINMYP
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCC
VDEKEGEKVGLSIDRPIASTTDTTQKEREASDPSGLDGTKYNCTQTNFDTALPYIKLDMW
CCCCCCCEECCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECH
AKFPDFQTRIRDAIVKRQALDRIMIGFNGIKRVKTSDHTVNKLLQDVNRGWLQSIRDDAP
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
GQMMDKIVDDKGDVISPKIRIGKGGDFNNLDALVMAATDELIEPWFQEDTELVAITGRQL
HHHHHHHHCCCCCEECCEEEECCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEECCHHH
LADKYFPIVNQSQPNTEALAADLIISQKRIGGLPAVRAPSFPPDAIFITRLDNLSIYWQD
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEEECC
GTRRRSIIDNPRRDRIENFESVNEAYVVEDFGCVALIENIEFGDFSVPAEG
CCCCHHHHCCCCHHHHHHHHHCCCEEEEECCCCEEHEECCCCCCCCCCCCC
>Mature Secondary Structure
MKKTTRLKYNQYRQQVASLNGLDNKEDISAKFTVEPSIAQKLETKQQESSVFLSKINMYP
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCC
VDEKEGEKVGLSIDRPIASTTDTTQKEREASDPSGLDGTKYNCTQTNFDTALPYIKLDMW
CCCCCCCEECCEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECH
AKFPDFQTRIRDAIVKRQALDRIMIGFNGIKRVKTSDHTVNKLLQDVNRGWLQSIRDDAP
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
GQMMDKIVDDKGDVISPKIRIGKGGDFNNLDALVMAATDELIEPWFQEDTELVAITGRQL
HHHHHHHHCCCCCEECCEEEECCCCCCCCCCCEEEEHHHHHHHHHHHCCCEEEEECCHHH
LADKYFPIVNQSQPNTEALAADLIISQKRIGGLPAVRAPSFPPDAIFITRLDNLSIYWQD
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEEECC
GTRRRSIIDNPRRDRIENFESVNEAYVVEDFGCVALIENIEFGDFSVPAEG
CCCCHHHHCCCCHHHHHHHHHCCCEEEEECCCCEEHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA