| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is 51596171
Identifier: 51596171
GI number: 51596171
Start: 2187203
End: 2187667
Strand: Reverse
Name: 51596171
Synonym: YPTB1836
Alternate gene names: NA
Gene position: 2187667-2187203 (Counterclockwise)
Preceding gene: 51596172
Following gene: 51596170
Centisome position: 46.11
GC content: 47.53
Gene sequence:
>465_bases ATGATGATGGCACTGGGGATGTTTGTCTTTATGCGGCAAACCACCCCTTATCAAGATTTTCAACATCAGATGGCGTGGCG GCATCCGTCAAATGCCCGTTTTGGTCTCCGCTCATCCAGTCAATTTTTAGGGCCAGATGAAGAATCCATTACCTTATCCG GTGTGTTGTATCCAGAGCTGACCGGCGGCAAGCTTTCATTAATGGCCTTGCAACTGATGGCAGAAACCGGCAAGGCCTGG TCACTGATTGAAGGGAACGGCGCGATCCATGGCATGTTTGTCATTGAGAGCCTGGAACGCACTAAAAGTATTTTTTTCAG TGATGGGTCAGCCCGTAAAATTGAATTTACGCTTAGCTTAAAACGTACCGATGAATCACTAAAAGAGATGTTTGGGGAGC TGTCTCAGCAATTTGACGATATCGCCAGCAGCGTATCGAACACCGCCGCCGGATTATTATCATGA
Upstream 100 bases:
>100_bases TTGCCCGCGAGGTGGCCCGCCAGCTGGCCGCCCACAACCGCAGGGAACAGAGCAAATCAAACCGCAGTTATCAAGACCAT GACGACTAAGGAGCAATAAC
Downstream 100 bases:
>100_bases TAAGCATTGATACCGGGCATAACGAACCCGATTATTCTATTTCCGTGGATGGCATAGATAAAACGGGTGGCATTAAAAAG CGCCTAATGTCATTGACGTT
Product: bacteriophage P2 tail protein
Products: NA
Alternate protein names: Phage Tail Protein; Phage P2 GpU; Phage-Related Tail Protein; Phage P2 GpU Family Protein; Phage Protein U; Phage Tail Protein U; Tail Fiber Protein; Phage-Related Protein; Phage Tail Assembly Protein; Fels-2 Prophage Protein; Tail Fiber Protein Of Prophage; Bacteriophage Tail Fiber Protein U; Bacteriophage Tail Protein U; Phage P2 GpU Protein; Prophage Tail Protein; Bacteriophage P2 Tail Protein GPU; Phage Tail; Tail Protein; Phage-Like Tail Protein; Tail Protein U; Bacteriophage P2 Phage-Related Tail U Protein; Tail Assembly Protein; Bacteriophage Tail Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MMMALGMFVFMRQTTPYQDFQHQMAWRHPSNARFGLRSSSQFLGPDEESITLSGVLYPELTGGKLSLMALQLMAETGKAW SLIEGNGAIHGMFVIESLERTKSIFFSDGSARKIEFTLSLKRTDESLKEMFGELSQQFDDIASSVSNTAAGLLS
Sequences:
>Translated_154_residues MMMALGMFVFMRQTTPYQDFQHQMAWRHPSNARFGLRSSSQFLGPDEESITLSGVLYPELTGGKLSLMALQLMAETGKAW SLIEGNGAIHGMFVIESLERTKSIFFSDGSARKIEFTLSLKRTDESLKEMFGELSQQFDDIASSVSNTAAGLLS >Mature_154_residues MMMALGMFVFMRQTTPYQDFQHQMAWRHPSNARFGLRSSSQFLGPDEESITLSGVLYPELTGGKLSLMALQLMAETGKAW SLIEGNGAIHGMFVIESLERTKSIFFSDGSARKIEFTLSLKRTDESLKEMFGELSQQFDDIASSVSNTAAGLLS
Specific function: Unknown
COG id: COG3499
COG function: function code R; Phage protein U
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17102; Mature: 17102
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMALGMFVFMRQTTPYQDFQHQMAWRHPSNARFGLRSSSQFLGPDEESITLSGVLYPEL CHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEEEECCC TGGKLSLMALQLMAETGKAWSLIEGNGAIHGMFVIESLERTKSIFFSDGSARKIEFTLSL CCCCHHHHHHHHHHHCCCEEEEEECCCCEEHHHHHHHHHHHHHEEECCCCCEEEEEEEEE KRTDESLKEMFGELSQQFDDIASSVSNTAAGLLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMMALGMFVFMRQTTPYQDFQHQMAWRHPSNARFGLRSSSQFLGPDEESITLSGVLYPEL CHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEEEECCC TGGKLSLMALQLMAETGKAWSLIEGNGAIHGMFVIESLERTKSIFFSDGSARKIEFTLSL CCCCHHHHHHHHHHHCCCEEEEEECCCCEEHHHHHHHHHHHHHEEECCCCCEEEEEEEEE KRTDESLKEMFGELSQQFDDIASSVSNTAAGLLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA