Definition Yersinia pseudotuberculosis IP 32953, complete genome.
Accession NC_006155
Length 4,744,671

Click here to switch to the map view.

The map label for this gene is 51596167

Identifier: 51596167

GI number: 51596167

Start: 2182663

End: 2184330

Strand: Direct

Name: 51596167

Synonym: YPTB1832

Alternate gene names: NA

Gene position: 2182663-2184330 (Clockwise)

Preceding gene: 51596166

Following gene: 51596194

Centisome position: 46.0

GC content: 46.58

Gene sequence:

>1668_bases
GTGGTGAAAATGTTTGTCGATGGGCAAGAAAAGTTGGTTCAAGTTAATGATCCGCAACTTTACCGCGCATTCACCATGAT
TGACCTTGAGCGCAGCAGTTCCGCATTTATGAAAGCGGCCCGCACAGCTAAAAAAGTGCTGACCATTAGCACTACATCAA
TGCCTGATTTTATTATCCGTAACTTCTTACGTGATTCCGTGCACTCCTGGGCTATCAATAAAGATGGCTTTAAGCCAGTT
ACCGCATCGTTTGCTGGGTTTAAAAAAACACTGAGAACCGATGATACTTTTGTCGATATGATGTTTGCTGGCGCAACATT
TGGCGGGGGGTATTCAAACGTCTACGATCCGGCGTCTACGGCACAAACTATCCGCGCTGTGCTGCGTCGGAAGGGTTATA
AAGACAGCCAGATCAATCAGTTTGAATCATCTATTGCCCGGTCTGGCAAAGAGGTTTTGGGCAAAATTGAGCAGGGATTG
CAGAAGTATAAGCATGTCAGTGAAGCGGCAGAAAACGCGAATAGGCTGGCCACTTATGAAGCTGCAGTCAAGTCGGGGAA
AAGTAAAGCTCTAGCAGCCTTTGAATCTCGTGATCTCATGGACTTCAGCATGATGGGGGCCAGCAATATCATGATTAATT
TGAGTGATATGTTGCCGTTCTTCAATGCCCGCATGCAAGGGTTAAGTAAGTTAGGTCGAGGTATTAAAGAGAACCCCCGT
GAGGTACTAAAACGCGGAGGCATGATTGCTGCAGCCTCACTGGCTCTGTTGGCACTGAACTGGGATGATGAACGCTACGA
AGAATTACAGGATTGGGATAAAGACACGTACTGGCATGCATGGATTGGTGATCAGCATATTCGTATTCCGAAACCTTTCG
AGATAGGTCTGATGTTTGGCACTTTGCCTGAGCGGTTTGTTCGTGCACTGGGGGGCAGAGATACAGGGGCTAAATTTGGC
AAGCTGGTAGCACATAACTTTATGGAAACCATGGCCTTCAACCCGATTCCGCAAGTCGCCATGCCGATTGCTGAAGCTTA
TGTTAACTATGATTTCTTCAAAGGCAGCCCGATTGAGAATATGGCAGATAAGAATCTGATAGCTGGCGCTCGTTACAACG
ACCAAACCAGCCTGCTGATGCGTGAAATTGGTCAAGCGACAAACCTGTCACCGAAGATGCTTGATCACATTATTACCGGG
TACACCAGTAGCCTGGGCGGGTACGTGCTTGGAGCAACCAATCTTCTTATGCGTAATCTGAAGGACTACGGTGAAACACC
CGCTATTCGCCTTGATGAAATGCCCGTTATTAAATCCTTCTTCCGTGGGACTGACCCAGCCAAATCTACACAGTTCACTG
AAGATTTCTACCGCATGATGACCCAAGCCAATCAAATTAACAGTACCATTAACAGCTTTCGTAAGCAGGGGCGTGGTGAA
GATGCCAATGAATTGTTAGAAAATAACCGCGGGAAATTATCGCAACGTAAGGGGCTAACGGCGACTCAGCAACAAGTGAA
GACACTGAATGCCCAGATTGAAATGATGAGGCGGGACCGGATATTAACGGCGGATCAGAAAAGAGAAAAGATTGACCGAT
TAATGGCAACCAGAAACAAACTGGTACAGCAGGCAGTGGAGAGGGTGAATCCCTATTTTAATAAATAA

Upstream 100 bases:

>100_bases
GAAGCTATGCGCCGTGCGGTAGTTAATCTGGCAGATACTGGTGTACTTGAAGTTATTGACTCACCGAATAAGATGGATTT
TGAGCGCATAGGTAAAAGAC

Downstream 100 bases:

>100_bases
TATAGGTGGGCTAGAGCCCACCTATGTTCACTTGAAAATATTTTTAATAATACTGTTAACATGAGCTTTTGCGAGTTTTA
ATCCTTCTTCTTTTGCGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MVKMFVDGQEKLVQVNDPQLYRAFTMIDLERSSSAFMKAARTAKKVLTISTTSMPDFIIRNFLRDSVHSWAINKDGFKPV
TASFAGFKKTLRTDDTFVDMMFAGATFGGGYSNVYDPASTAQTIRAVLRRKGYKDSQINQFESSIARSGKEVLGKIEQGL
QKYKHVSEAAENANRLATYEAAVKSGKSKALAAFESRDLMDFSMMGASNIMINLSDMLPFFNARMQGLSKLGRGIKENPR
EVLKRGGMIAAASLALLALNWDDERYEELQDWDKDTYWHAWIGDQHIRIPKPFEIGLMFGTLPERFVRALGGRDTGAKFG
KLVAHNFMETMAFNPIPQVAMPIAEAYVNYDFFKGSPIENMADKNLIAGARYNDQTSLLMREIGQATNLSPKMLDHIITG
YTSSLGGYVLGATNLLMRNLKDYGETPAIRLDEMPVIKSFFRGTDPAKSTQFTEDFYRMMTQANQINSTINSFRKQGRGE
DANELLENNRGKLSQRKGLTATQQQVKTLNAQIEMMRRDRILTADQKREKIDRLMATRNKLVQQAVERVNPYFNK

Sequences:

>Translated_555_residues
MVKMFVDGQEKLVQVNDPQLYRAFTMIDLERSSSAFMKAARTAKKVLTISTTSMPDFIIRNFLRDSVHSWAINKDGFKPV
TASFAGFKKTLRTDDTFVDMMFAGATFGGGYSNVYDPASTAQTIRAVLRRKGYKDSQINQFESSIARSGKEVLGKIEQGL
QKYKHVSEAAENANRLATYEAAVKSGKSKALAAFESRDLMDFSMMGASNIMINLSDMLPFFNARMQGLSKLGRGIKENPR
EVLKRGGMIAAASLALLALNWDDERYEELQDWDKDTYWHAWIGDQHIRIPKPFEIGLMFGTLPERFVRALGGRDTGAKFG
KLVAHNFMETMAFNPIPQVAMPIAEAYVNYDFFKGSPIENMADKNLIAGARYNDQTSLLMREIGQATNLSPKMLDHIITG
YTSSLGGYVLGATNLLMRNLKDYGETPAIRLDEMPVIKSFFRGTDPAKSTQFTEDFYRMMTQANQINSTINSFRKQGRGE
DANELLENNRGKLSQRKGLTATQQQVKTLNAQIEMMRRDRILTADQKREKIDRLMATRNKLVQQAVERVNPYFNK
>Mature_555_residues
MVKMFVDGQEKLVQVNDPQLYRAFTMIDLERSSSAFMKAARTAKKVLTISTTSMPDFIIRNFLRDSVHSWAINKDGFKPV
TASFAGFKKTLRTDDTFVDMMFAGATFGGGYSNVYDPASTAQTIRAVLRRKGYKDSQINQFESSIARSGKEVLGKIEQGL
QKYKHVSEAAENANRLATYEAAVKSGKSKALAAFESRDLMDFSMMGASNIMINLSDMLPFFNARMQGLSKLGRGIKENPR
EVLKRGGMIAAASLALLALNWDDERYEELQDWDKDTYWHAWIGDQHIRIPKPFEIGLMFGTLPERFVRALGGRDTGAKFG
KLVAHNFMETMAFNPIPQVAMPIAEAYVNYDFFKGSPIENMADKNLIAGARYNDQTSLLMREIGQATNLSPKMLDHIITG
YTSSLGGYVLGATNLLMRNLKDYGETPAIRLDEMPVIKSFFRGTDPAKSTQFTEDFYRMMTQANQINSTINSFRKQGRGE
DANELLENNRGKLSQRKGLTATQQQVKTLNAQIEMMRRDRILTADQKREKIDRLMATRNKLVQQAVERVNPYFNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62619; Mature: 62619

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKMFVDGQEKLVQVNDPQLYRAFTMIDLERSSSAFMKAARTAKKVLTISTTSMPDFIIR
CEEEEECCCHHEEECCCCHHHHHHHHHEECCCHHHHHHHHHHHHHEEEEECCCCHHHHHH
NFLRDSVHSWAINKDGFKPVTASFAGFKKTLRTDDTFVDMMFAGATFGGGYSNVYDPAST
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHH
AQTIRAVLRRKGYKDSQINQFESSIARSGKEVLGKIEQGLQKYKHVSEAAENANRLATYE
HHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVKSGKSKALAAFESRDLMDFSMMGASNIMINLSDMLPFFNARMQGLSKLGRGIKENPR
HHHHCCCHHHHHHHHCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHH
EVLKRGGMIAAASLALLALNWDDERYEELQDWDKDTYWHAWIGDQHIRIPKPFEIGLMFG
HHHHCCCCHHHHHHHHHEECCCHHHHHHHHCCCCCCEEEEEECCCEECCCCCCEEHHHHH
TLPERFVRALGGRDTGAKFGKLVAHNFMETMAFNPIPQVAMPIAEAYVNYDFFKGSPIEN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHH
MADKNLIAGARYNDQTSLLMREIGQATNLSPKMLDHIITGYTSSLGGYVLGATNLLMRNL
HCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KDYGETPAIRLDEMPVIKSFFRGTDPAKSTQFTEDFYRMMTQANQINSTINSFRKQGRGE
HHHCCCCCEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DANELLENNRGKLSQRKGLTATQQQVKTLNAQIEMMRRDRILTADQKREKIDRLMATRNK
CHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LVQQAVERVNPYFNK
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MVKMFVDGQEKLVQVNDPQLYRAFTMIDLERSSSAFMKAARTAKKVLTISTTSMPDFIIR
CEEEEECCCHHEEECCCCHHHHHHHHHEECCCHHHHHHHHHHHHHEEEEECCCCHHHHHH
NFLRDSVHSWAINKDGFKPVTASFAGFKKTLRTDDTFVDMMFAGATFGGGYSNVYDPAST
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHH
AQTIRAVLRRKGYKDSQINQFESSIARSGKEVLGKIEQGLQKYKHVSEAAENANRLATYE
HHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVKSGKSKALAAFESRDLMDFSMMGASNIMINLSDMLPFFNARMQGLSKLGRGIKENPR
HHHHCCCHHHHHHHHCCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHH
EVLKRGGMIAAASLALLALNWDDERYEELQDWDKDTYWHAWIGDQHIRIPKPFEIGLMFG
HHHHCCCCHHHHHHHHHEECCCHHHHHHHHCCCCCCEEEEEECCCEECCCCCCEEHHHHH
TLPERFVRALGGRDTGAKFGKLVAHNFMETMAFNPIPQVAMPIAEAYVNYDFFKGSPIEN
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHH
MADKNLIAGARYNDQTSLLMREIGQATNLSPKMLDHIITGYTSSLGGYVLGATNLLMRNL
HCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KDYGETPAIRLDEMPVIKSFFRGTDPAKSTQFTEDFYRMMTQANQINSTINSFRKQGRGE
HHHCCCCCEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DANELLENNRGKLSQRKGLTATQQQVKTLNAQIEMMRRDRILTADQKREKIDRLMATRNK
CHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LVQQAVERVNPYFNK
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA