| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
Click here to switch to the map view.
The map label for this gene is 51596149
Identifier: 51596149
GI number: 51596149
Start: 2162053
End: 2163276
Strand: Direct
Name: 51596149
Synonym: YPTB1814
Alternate gene names: NA
Gene position: 2162053-2163276 (Clockwise)
Preceding gene: 51596148
Following gene: 51596150
Centisome position: 45.57
GC content: 50.74
Gene sequence:
>1224_bases ATGACGACTATCACCTCTGCCCAGGCGAATAAGCTAATGCAGGTCGCGCTGTTCACGGCTGCAAACCGTAACCGCTCATT TGTTAACGTACTAACCGAACAACAGGAAGCGCCGAAGTCAGTCAATCCTGATAAAAAAGGGACTACCCAGACAAGCCACA ACGCGCCCGTGGTGCGTATCACTGATCTGCAAAAGCAGAAAGGCGATGAAGTGGATATGCAAATCGTTCACAAACTGTCG AAGCGCCCGACGATGGGCGATGAGAAGTTGGCCGGTCGCGGTGAAAATCTGGCGTTTGCAGACTTTGCTTTGAAGATTAA CCAAGGCCGCCATTTAGTTGATGCGGGCGGCAAGATGTCTGAGCAGCGTTTCAAGCACAACCTGAATAAGACCGCCCGCA CGTTGCTGGGAACTTACTTCAACGATGTGCAGGACCAGTCTGCCACCTTCCATCTGGCGGGGGCGCGTGGCGATTACATG GCCGATGACACCATCGTGCCACTGGCTGAACACGGTGAATTTGGCAAAATCATGATCAATGATGTATTGCCACCCACCTA TGACCGCCATTTCTATTCTGGTGATGCGACATCTATGGAAACATTGGATGCAGCGGATCTGTTCACGCTAGCCACTGTCG ATAACATTGCCTTGTTCCTTGATGAAATGGCCCATCCTTTACAGCCGATCCGGATGTCTAAAGATGAGTTGGCTAATGAG GATCCGTATTTTGTTCTATACGTGACGCCGCGGCAGTGGAATGACTGGTACACATCTACTTCAGGTAAAGACTGGCAAGC GATGATGACCCGTGCAGTGCAACGTTCTAAGGGCTTCGATCATCCGCTGTTCAAAGGCGAATGTGCGATGTGGCGTAACG TGCTGGTGCGGAAATATGGTGGTACGCCAGTTCGTTTTAATACTGGCTCTAAAGTGTTGGTATCAAATAATGACTTGGTG GCTTCAACCAAGCTAATCACCACTGGCACCACCATTGACCGCGCTATGCTGCTGGGTGGTCAGGCACTGGCTAACGCTTA CGGTACCGGTGATGGCGGTGGTTTCTTTGGCTATAACGAAGAGAAAGTGGATCACGGTAATGGGACAGAAGTCTCTATCC GCTGGATTAACGGTTTGAAGAAGATCCGCTTCAAACAGAAAGATGGCCGAGTCAATGACCACGGTGTCATGGTAGTGGAC TCAGCGGTCACTCTGGGCAAGTAA
Upstream 100 bases:
>100_bases CGGATGCCCAAATTGAGGCGCTGTTAGACCAGGCAATCTAATAACCCTACTGATTTAAATCTCAACCCGCTACGGCGGGT TTTTCATTTATGGAGTATCT
Downstream 100 bases:
>100_bases TCTCTCAGTAATTCAATACGCTAATACCTCAAAGGGCAGGCTTCGGTCTGCTCTCTTTTTGTCTGGAGAAAAATATTATG ACAATCATTAAAGCGCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MTTITSAQANKLMQVALFTAANRNRSFVNVLTEQQEAPKSVNPDKKGTTQTSHNAPVVRITDLQKQKGDEVDMQIVHKLS KRPTMGDEKLAGRGENLAFADFALKINQGRHLVDAGGKMSEQRFKHNLNKTARTLLGTYFNDVQDQSATFHLAGARGDYM ADDTIVPLAEHGEFGKIMINDVLPPTYDRHFYSGDATSMETLDAADLFTLATVDNIALFLDEMAHPLQPIRMSKDELANE DPYFVLYVTPRQWNDWYTSTSGKDWQAMMTRAVQRSKGFDHPLFKGECAMWRNVLVRKYGGTPVRFNTGSKVLVSNNDLV ASTKLITTGTTIDRAMLLGGQALANAYGTGDGGGFFGYNEEKVDHGNGTEVSIRWINGLKKIRFKQKDGRVNDHGVMVVD SAVTLGK
Sequences:
>Translated_407_residues MTTITSAQANKLMQVALFTAANRNRSFVNVLTEQQEAPKSVNPDKKGTTQTSHNAPVVRITDLQKQKGDEVDMQIVHKLS KRPTMGDEKLAGRGENLAFADFALKINQGRHLVDAGGKMSEQRFKHNLNKTARTLLGTYFNDVQDQSATFHLAGARGDYM ADDTIVPLAEHGEFGKIMINDVLPPTYDRHFYSGDATSMETLDAADLFTLATVDNIALFLDEMAHPLQPIRMSKDELANE DPYFVLYVTPRQWNDWYTSTSGKDWQAMMTRAVQRSKGFDHPLFKGECAMWRNVLVRKYGGTPVRFNTGSKVLVSNNDLV ASTKLITTGTTIDRAMLLGGQALANAYGTGDGGGFFGYNEEKVDHGNGTEVSIRWINGLKKIRFKQKDGRVNDHGVMVVD SAVTLGK >Mature_406_residues TTITSAQANKLMQVALFTAANRNRSFVNVLTEQQEAPKSVNPDKKGTTQTSHNAPVVRITDLQKQKGDEVDMQIVHKLSK RPTMGDEKLAGRGENLAFADFALKINQGRHLVDAGGKMSEQRFKHNLNKTARTLLGTYFNDVQDQSATFHLAGARGDYMA DDTIVPLAEHGEFGKIMINDVLPPTYDRHFYSGDATSMETLDAADLFTLATVDNIALFLDEMAHPLQPIRMSKDELANED PYFVLYVTPRQWNDWYTSTSGKDWQAMMTRAVQRSKGFDHPLFKGECAMWRNVLVRKYGGTPVRFNTGSKVLVSNNDLVA STKLITTGTTIDRAMLLGGQALANAYGTGDGGGFFGYNEEKVDHGNGTEVSIRWINGLKKIRFKQKDGRVNDHGVMVVDS AVTLGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45104; Mature: 44972
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTITSAQANKLMQVALFTAANRNRSFVNVLTEQQEAPKSVNPDKKGTTQTSHNAPVVRI CCCCCCHHHHHHHHEEEEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE TDLQKQKGDEVDMQIVHKLSKRPTMGDEKLAGRGENLAFADFALKINQGRHLVDAGGKMS ECCHHCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEEEEEECCCCEEEECCCCHH EQRFKHNLNKTARTLLGTYFNDVQDQSATFHLAGARGDYMADDTIVPLAEHGEFGKIMIN HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEHHCCCCCCEEEEE DVLPPTYDRHFYSGDATSMETLDAADLFTLATVDNIALFLDEMAHPLQPIRMSKDELANE CCCCCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC DPYFVLYVTPRQWNDWYTSTSGKDWQAMMTRAVQRSKGFDHPLFKGECAMWRNVLVRKYG CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC GTPVRFNTGSKVLVSNNDLVASTKLITTGTTIDRAMLLGGQALANAYGTGDGGGFFGYNE CCEEEECCCCEEEEECCCEEEEEEEEECCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCC EKVDHGNGTEVSIRWINGLKKIRFKQKDGRVNDHGVMVVDSAVTLGK CEECCCCCCEEEEEECCCHHHHEEECCCCCCCCCCEEEEECCEECCC >Mature Secondary Structure TTITSAQANKLMQVALFTAANRNRSFVNVLTEQQEAPKSVNPDKKGTTQTSHNAPVVRI CCCCCHHHHHHHHEEEEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE TDLQKQKGDEVDMQIVHKLSKRPTMGDEKLAGRGENLAFADFALKINQGRHLVDAGGKMS ECCHHCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEEEEEEECCCCEEEECCCCHH EQRFKHNLNKTARTLLGTYFNDVQDQSATFHLAGARGDYMADDTIVPLAEHGEFGKIMIN HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEHHCCCCCCEEEEE DVLPPTYDRHFYSGDATSMETLDAADLFTLATVDNIALFLDEMAHPLQPIRMSKDELANE CCCCCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC DPYFVLYVTPRQWNDWYTSTSGKDWQAMMTRAVQRSKGFDHPLFKGECAMWRNVLVRKYG CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC GTPVRFNTGSKVLVSNNDLVASTKLITTGTTIDRAMLLGGQALANAYGTGDGGGFFGYNE CCEEEECCCCEEEEECCCEEEEEEEEECCCHHHHHHHHCCHHHHHCCCCCCCCCCCCCCC EKVDHGNGTEVSIRWINGLKKIRFKQKDGRVNDHGVMVVDSAVTLGK CEECCCCCCEEEEEECCCHHHHEEECCCCCCCCCCEEEEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA