Definition Yersinia pseudotuberculosis IP 32953, complete genome.
Accession NC_006155
Length 4,744,671

Click here to switch to the map view.

The map label for this gene is 51596141

Identifier: 51596141

GI number: 51596141

Start: 2152792

End: 2153310

Strand: Direct

Name: 51596141

Synonym: YPTB1806

Alternate gene names: NA

Gene position: 2152792-2153310 (Clockwise)

Preceding gene: 51596140

Following gene: 51596142

Centisome position: 45.37

GC content: 49.52

Gene sequence:

>519_bases
ATGTCCACAAAATTCATTATCGCAATTGTGGTCCTGTGCCTCGGCGGTACCGCACTCTATTTTCATCAATCTGCTGCGGA
GAAAGGCAGGCAATTATTGCAACTGCAATCTGATCTGGATGAATCGAAAGCCACTCTGGCATTACAGGCTTTCCAGTTCC
AGCGCTCAAATGAGATAGCGGCGCAAGCCGGTAGTTATAATGTCACCATTTCTGGCAAAAGCGAGGAAAGGCAAATTGAA
AACCGCAAAGACCTCAAAGTTGAGGAATGCGCTAATCAGTACATCCCTGATTCTACTGCTCAGCGGATGTACGACTATAC
GAACCGTTTACGTGCCAGGGCAATGCGCAATTCCGGCCAGCCTGACGGAACCGCTGCTGGTACCACTTCCCCCCGCAGAA
TGACATACCGCCAAGCCGTGTTGTGGATTGACCCGTTGCTGACCCTGTTAGACCAAGCTAATAACGATAGAGAATCGATC
CGCAGTCTGCCATCACAACAACAAAGCAAACAGGAGTGA

Upstream 100 bases:

>100_bases
TTTAAGCTGCTTTGGTAACGCTACGTGAAATCTGAATTGCTGGTGTCTGCCATTACCCCTACTTTTTTCATAGTAAACGG
CTTTAAGCCCGGATCCTGAT

Downstream 100 bases:

>100_bases
GTCATGCATTCACCAATTATCAAATATTTTGCATATACCCATTTACCACCAGTGCTTCAGGAAGTCAGTAAGCCAATTGG
TGATTTAGCTATTGCAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSTKFIIAIVVLCLGGTALYFHQSAAEKGRQLLQLQSDLDESKATLALQAFQFQRSNEIAAQAGSYNVTISGKSEERQIE
NRKDLKVEECANQYIPDSTAQRMYDYTNRLRARAMRNSGQPDGTAAGTTSPRRMTYRQAVLWIDPLLTLLDQANNDRESI
RSLPSQQQSKQE

Sequences:

>Translated_172_residues
MSTKFIIAIVVLCLGGTALYFHQSAAEKGRQLLQLQSDLDESKATLALQAFQFQRSNEIAAQAGSYNVTISGKSEERQIE
NRKDLKVEECANQYIPDSTAQRMYDYTNRLRARAMRNSGQPDGTAAGTTSPRRMTYRQAVLWIDPLLTLLDQANNDRESI
RSLPSQQQSKQE
>Mature_171_residues
STKFIIAIVVLCLGGTALYFHQSAAEKGRQLLQLQSDLDESKATLALQAFQFQRSNEIAAQAGSYNVTISGKSEERQIEN
RKDLKVEECANQYIPDSTAQRMYDYTNRLRARAMRNSGQPDGTAAGTTSPRRMTYRQAVLWIDPLLTLLDQANNDRESIR
SLPSQQQSKQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19348; Mature: 19217

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKFIIAIVVLCLGGTALYFHQSAAEKGRQLLQLQSDLDESKATLALQAFQFQRSNEIA
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AQAGSYNVTISGKSEERQIENRKDLKVEECANQYIPDSTAQRMYDYTNRLRARAMRNSGQ
HCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDGTAAGTTSPRRMTYRQAVLWIDPLLTLLDQANNDRESIRSLPSQQQSKQE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCC
>Mature Secondary Structure 
STKFIIAIVVLCLGGTALYFHQSAAEKGRQLLQLQSDLDESKATLALQAFQFQRSNEIA
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
AQAGSYNVTISGKSEERQIENRKDLKVEECANQYIPDSTAQRMYDYTNRLRARAMRNSGQ
HCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDGTAAGTTSPRRMTYRQAVLWIDPLLTLLDQANNDRESIRSLPSQQQSKQE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA