| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596124
Identifier: 51596124
GI number: 51596124
Start: 2139340
End: 2139957
Strand: Reverse
Name: 51596124
Synonym: YPTB1789
Alternate gene names: NA
Gene position: 2139957-2139340 (Counterclockwise)
Preceding gene: 51596125
Following gene: 51596123
Centisome position: 45.1
GC content: 37.86
Gene sequence:
>618_bases ATGTATTGTATGAAATGCAGCGCATCAATTGAGCCACATAGCAAATTTTGTTCATCTTGTGGAACTCAAGTAAATCAGTT AAATCAGGCAAAGCCATCAGACCCTTGGGTCAGTGATTCACCTAAAAGACAACAAACCATTATTGATGCAAAACCTATCG CGACAACAGAAAATGGCGTTATGGCTTTTATCAAAAAATGGGGCACGAGAGCTATTATTCTCATTGTTGCCACTATTTTT GCTGTTCTTGGCAAAGATCTAGGTCGCGCGCTAACAGATAAATCAGATAATGCCTCAATCTGGGAAAAAGCCGTACCCGC ATTTGCTGAAGAAAAAATTAAACTTGGCATCCCTAGACGTTTGGATGACAACACCCTTTTAACTGATATGTTTGTCAAAG ACAAAAGCATTAATTACATATATAAAATCAATGATATGAGTCCTGATTACGAAACAATTGTACATGTTAAAGCCATTGCT AAAGAAAGTTTTACCCATGCACTATGCGACAATATTCTTATCGATAAATATCAAGGCGCTGCTAACTATATTTACCAATT CCCATCAAAAACATTAACCGCCACCTTTAACAAATCAGACTGCCCAGCCGTCCGCTAA
Upstream 100 bases:
>100_bases CCTCTGAACCCCCAGTACCCAATGATAGAAATCAATGGTAACTGCCGAATTATCGGTGTTGTTGTTGAGGCTAAATGGGA AAATTTATAAGGAAAAAACA
Downstream 100 bases:
>100_bases TATCCCCTCACTCCTCCAGAAAAACCACATGTAATGGTTTTTCACAACCATATCCGAAACTAAAGTATCAGATCCTGCTT GACGCAATCCGAAACTATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MYCMKCSASIEPHSKFCSSCGTQVNQLNQAKPSDPWVSDSPKRQQTIIDAKPIATTENGVMAFIKKWGTRAIILIVATIF AVLGKDLGRALTDKSDNASIWEKAVPAFAEEKIKLGIPRRLDDNTLLTDMFVKDKSINYIYKINDMSPDYETIVHVKAIA KESFTHALCDNILIDKYQGAANYIYQFPSKTLTATFNKSDCPAVR
Sequences:
>Translated_205_residues MYCMKCSASIEPHSKFCSSCGTQVNQLNQAKPSDPWVSDSPKRQQTIIDAKPIATTENGVMAFIKKWGTRAIILIVATIF AVLGKDLGRALTDKSDNASIWEKAVPAFAEEKIKLGIPRRLDDNTLLTDMFVKDKSINYIYKINDMSPDYETIVHVKAIA KESFTHALCDNILIDKYQGAANYIYQFPSKTLTATFNKSDCPAVR >Mature_205_residues MYCMKCSASIEPHSKFCSSCGTQVNQLNQAKPSDPWVSDSPKRQQTIIDAKPIATTENGVMAFIKKWGTRAIILIVATIF AVLGKDLGRALTDKSDNASIWEKAVPAFAEEKIKLGIPRRLDDNTLLTDMFVKDKSINYIYKINDMSPDYETIVHVKAIA KESFTHALCDNILIDKYQGAANYIYQFPSKTLTATFNKSDCPAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22878; Mature: 22878
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCMKCSASIEPHSKFCSSCGTQVNQLNQAKPSDPWVSDSPKRQQTIIDAKPIATTENGV CCEECCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCHH MAFIKKWGTRAIILIVATIFAVLGKDLGRALTDKSDNASIWEKAVPAFAEEKIKLGIPRR HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC LDDNTLLTDMFVKDKSINYIYKINDMSPDYETIVHVKAIAKESFTHALCDNILIDKYQGA CCCCCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ANYIYQFPSKTLTATFNKSDCPAVR HHHHHHCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MYCMKCSASIEPHSKFCSSCGTQVNQLNQAKPSDPWVSDSPKRQQTIIDAKPIATTENGV CCEECCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCHH MAFIKKWGTRAIILIVATIFAVLGKDLGRALTDKSDNASIWEKAVPAFAEEKIKLGIPRR HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC LDDNTLLTDMFVKDKSINYIYKINDMSPDYETIVHVKAIAKESFTHALCDNILIDKYQGA CCCCCCHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ANYIYQFPSKTLTATFNKSDCPAVR HHHHHHCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA