| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596117
Identifier: 51596117
GI number: 51596117
Start: 2132832
End: 2133971
Strand: Reverse
Name: 51596117
Synonym: YPTB1782
Alternate gene names: NA
Gene position: 2133971-2132832 (Counterclockwise)
Preceding gene: 51596118
Following gene: 51596116
Centisome position: 44.98
GC content: 49.65
Gene sequence:
>1140_bases ATGACCACACAGGCCACCACTGCCAGTGTGCTGGAGTCATCCCTGCGTCCAGTTCGGGCGCAGTTAGACCTTGCCATTGA GCAGACTACCGGCACCGCACAGCGCTCTATCGAGAGCGCTACTGTTTTACTCAACCAAACACAGTCCCTATGTATTGAAC AACTCAATATCGAGACTGACGAATACAACCTTTTATTCGACCGTTTAGAGAAAGCTGAGAACGACCTAACCACGAAATCC TTGGCATTAACGCATGTACAGGAACGCATAGAAAGCGCTGACCTGGTAGCCGCTGAAGCGAATGCCCAGAGAGACAGTAT TTCAGCCAAATACAACCTTTCAATTTCTGATCAACGCGTGTTGGCCACTGAAGTGAATCGGTTGAAATCACTTAACCCTG AAAAAATGAAAATCCAAATCGTGCGGCTGAAAGATGAACTGGACAACAAGCGCACGCTGTTAAACCAGCAATTGACGGAA ATCCGGCGGTATAAAAAAGAGGCGGCAGAAAGAACCAGCAAACTGGCGGCCATGGTCAATGTTAACAACCAACTGGCTAA TACTGTTTCAGACCTTACCGCACGGATCCAGCGCATGGATGGGGACGTCGAGCCCACTTATTACCGTGGTAATGATGGCA CTGAGTTTTACTTTTACACCTTTCAGTGGGGGTTGAAGCTCCGCTCTGGTGATTATGATATGCAGCTTATTAACGATATT GACTGGCATATTGAAATCCGTTCCACCACGGGTATTGGCCTGATCGTCTCTGTTAATGAGTGGGCATTGCCGGTCTACCC CATGGTTGATGACTTCAAACGGAACTGGCCGGATGGCCTAACGCCTGCTGTTACACAGCGCATTCGTGACCTGCTTGAAC CAACTCACCCGCACCTGGTTAAGCGGGCGGAATGGGCAGAGTCTGTGCTTACCGAAACTCTCCCCTTGAAAGAGCAGTAT TTAGAACTGCTGGCCCGCTCTGGGCTCCATTCATTGTTTGATGTTGTTCGCCGAACGCCTGACATGTTGGCTAATGCAGT CAAAGGTTTCGGGATCGCAAGCGCTCGCCAAGTGCATGCTCAATGCACCCGAATCGTAAAAGAGTGGGAATCAGAGCAGA AACAGAAGGAAGCCGCATGA
Upstream 100 bases:
>100_bases GCCTGTACCAGGCGGTAAAAGCTGGTCGGATCCGCTATTTCTCTATCACGCAGTAACCTTTCATCACCTGCCTCGACAGG CAATTCACAGGTAATTAATC
Downstream 100 bases:
>100_bases TGGATGAGGAACTAAACCTGAGCACCGGCTGTTATTTTAAGGAAGATGACAGAGGAGACCACACCGCTTGCATAATCTGG TTAATGCGCAGCCGCGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MTTQATTASVLESSLRPVRAQLDLAIEQTTGTAQRSIESATVLLNQTQSLCIEQLNIETDEYNLLFDRLEKAENDLTTKS LALTHVQERIESADLVAAEANAQRDSISAKYNLSISDQRVLATEVNRLKSLNPEKMKIQIVRLKDELDNKRTLLNQQLTE IRRYKKEAAERTSKLAAMVNVNNQLANTVSDLTARIQRMDGDVEPTYYRGNDGTEFYFYTFQWGLKLRSGDYDMQLINDI DWHIEIRSTTGIGLIVSVNEWALPVYPMVDDFKRNWPDGLTPAVTQRIRDLLEPTHPHLVKRAEWAESVLTETLPLKEQY LELLARSGLHSLFDVVRRTPDMLANAVKGFGIASARQVHAQCTRIVKEWESEQKQKEAA
Sequences:
>Translated_379_residues MTTQATTASVLESSLRPVRAQLDLAIEQTTGTAQRSIESATVLLNQTQSLCIEQLNIETDEYNLLFDRLEKAENDLTTKS LALTHVQERIESADLVAAEANAQRDSISAKYNLSISDQRVLATEVNRLKSLNPEKMKIQIVRLKDELDNKRTLLNQQLTE IRRYKKEAAERTSKLAAMVNVNNQLANTVSDLTARIQRMDGDVEPTYYRGNDGTEFYFYTFQWGLKLRSGDYDMQLINDI DWHIEIRSTTGIGLIVSVNEWALPVYPMVDDFKRNWPDGLTPAVTQRIRDLLEPTHPHLVKRAEWAESVLTETLPLKEQY LELLARSGLHSLFDVVRRTPDMLANAVKGFGIASARQVHAQCTRIVKEWESEQKQKEAA >Mature_378_residues TTQATTASVLESSLRPVRAQLDLAIEQTTGTAQRSIESATVLLNQTQSLCIEQLNIETDEYNLLFDRLEKAENDLTTKSL ALTHVQERIESADLVAAEANAQRDSISAKYNLSISDQRVLATEVNRLKSLNPEKMKIQIVRLKDELDNKRTLLNQQLTEI RRYKKEAAERTSKLAAMVNVNNQLANTVSDLTARIQRMDGDVEPTYYRGNDGTEFYFYTFQWGLKLRSGDYDMQLINDID WHIEIRSTTGIGLIVSVNEWALPVYPMVDDFKRNWPDGLTPAVTQRIRDLLEPTHPHLVKRAEWAESVLTETLPLKEQYL ELLARSGLHSLFDVVRRTPDMLANAVKGFGIASARQVHAQCTRIVKEWESEQKQKEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43132; Mature: 43001
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQATTASVLESSLRPVRAQLDLAIEQTTGTAQRSIESATVLLNQTQSLCIEQLNIETD CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EYNLLFDRLEKAENDLTTKSLALTHVQERIESADLVAAEANAQRDSISAKYNLSISDQRV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHCCCEEEEECCCCCHH LATEVNRLKSLNPEKMKIQIVRLKDELDNKRTLLNQQLTEIRRYKKEAAERTSKLAAMVN HHHHHHHHHCCCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VNNQLANTVSDLTARIQRMDGDVEPTYYRGNDGTEFYFYTFQWGLKLRSGDYDMQLINDI CCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEEEEEEEECCCCCHHEECCC DWHIEIRSTTGIGLIVSVNEWALPVYPMVDDFKRNWPDGLTPAVTQRIRDLLEPTHPHLV CEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHH KRAEWAESVLTETLPLKEQYLELLARSGLHSLFDVVRRTPDMLANAVKGFGIASARQVHA HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH QCTRIVKEWESEQKQKEAA HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTQATTASVLESSLRPVRAQLDLAIEQTTGTAQRSIESATVLLNQTQSLCIEQLNIETD CCCHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EYNLLFDRLEKAENDLTTKSLALTHVQERIESADLVAAEANAQRDSISAKYNLSISDQRV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHCCCEEEEECCCCCHH LATEVNRLKSLNPEKMKIQIVRLKDELDNKRTLLNQQLTEIRRYKKEAAERTSKLAAMVN HHHHHHHHHCCCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VNNQLANTVSDLTARIQRMDGDVEPTYYRGNDGTEFYFYTFQWGLKLRSGDYDMQLINDI CCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEEEEEEEECCCCCHHEECCC DWHIEIRSTTGIGLIVSVNEWALPVYPMVDDFKRNWPDGLTPAVTQRIRDLLEPTHPHLV CEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHH KRAEWAESVLTETLPLKEQYLELLARSGLHSLFDVVRRTPDMLANAVKGFGIASARQVHA HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH QCTRIVKEWESEQKQKEAA HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA