Definition Yersinia pseudotuberculosis IP 32953, complete genome.
Accession NC_006155
Length 4,744,671

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The map label for this gene is 51596104

Identifier: 51596104

GI number: 51596104

Start: 2122130

End: 2122639

Strand: Reverse

Name: 51596104

Synonym: YPTB1769

Alternate gene names: NA

Gene position: 2122639-2122130 (Counterclockwise)

Preceding gene: 51596105

Following gene: 51596103

Centisome position: 44.74

GC content: 51.37

Gene sequence:

>510_bases
ATGTTTGATTTTTCAGTGTCCAAACATCCGCACTTTGATAACGCCTGCCGCCAGTTTGCGTTAAAGCACAACTTAGTCGA
GCTGGCAGCAAACGCAGGGATTGCGGCGCAGGTTCTACGGAATAAATTGAACCCCGATCAGCCGCACCGTTTGACCGTTG
ACGAGCTATTACGCATTACCGACCAGACCGAAGACCCAACGTTATTAGACGGTCTGCTGTCACAAATCAATTGCATGCCA
TCTGTGCCAGTCAATGAAGCCTGCCCCGGCAATATCCCGACTTATGCGCTACATGCTACTGCCGCCGTGGGTTCTATTGC
TGCCGCTGCGGTGCAAGGCAATCACAAAACAGCATTCAGCAAATCTGCACTGTTGGATAGCGTCAATACTGCGATTCGTC
ATCTGTCATTGATTGGCCTGACGGTGCAGGCGCGCATTCAATCAACCCCCGCGCTTGCTTCAACCGTTGATGTTATTAGC
GGCTTGAGTGCTGTCGCTGGTTTGAGTTGA

Upstream 100 bases:

>100_bases
TCTCGTAAATATGATCGCTCTCACTAAAGAAGCGGCAAACCAGTAATGTTCGATGTTCAAATTTGCCAACTAATTGTCGG
CATATGTGAGGAAGTAAGCC

Downstream 100 bases:

>100_bases
GGTGTCTTTATGATTATTTCTATTGCCCCATTGTTAAAACAGCAAAGCCCGGTAAACCTGCGCCATTTCGGTAATGGTGT
GCTGGAGTTGAAGAACGGCC

Product: regulatory protein CII bacteriophage 186

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MFDFSVSKHPHFDNACRQFALKHNLVELAANAGIAAQVLRNKLNPDQPHRLTVDELLRITDQTEDPTLLDGLLSQINCMP
SVPVNEACPGNIPTYALHATAAVGSIAAAAVQGNHKTAFSKSALLDSVNTAIRHLSLIGLTVQARIQSTPALASTVDVIS
GLSAVAGLS

Sequences:

>Translated_169_residues
MFDFSVSKHPHFDNACRQFALKHNLVELAANAGIAAQVLRNKLNPDQPHRLTVDELLRITDQTEDPTLLDGLLSQINCMP
SVPVNEACPGNIPTYALHATAAVGSIAAAAVQGNHKTAFSKSALLDSVNTAIRHLSLIGLTVQARIQSTPALASTVDVIS
GLSAVAGLS
>Mature_169_residues
MFDFSVSKHPHFDNACRQFALKHNLVELAANAGIAAQVLRNKLNPDQPHRLTVDELLRITDQTEDPTLLDGLLSQINCMP
SVPVNEACPGNIPTYALHATAAVGSIAAAAVQGNHKTAFSKSALLDSVNTAIRHLSLIGLTVQARIQSTPALASTVDVIS
GLSAVAGLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009679 [H]

Pfam domain/function: PF06892 Phage_CP76 [H]

EC number: NA

Molecular weight: Translated: 17796; Mature: 17796

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDFSVSKHPHFDNACRQFALKHNLVELAANAGIAAQVLRNKLNPDQPHRLTVDELLRIT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEECHHHHHHHH
DQTEDPTLLDGLLSQINCMPSVPVNEACPGNIPTYALHATAAVGSIAAAAVQGNHKTAFS
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
KSALLDSVNTAIRHLSLIGLTVQARIQSTPALASTVDVISGLSAVAGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFDFSVSKHPHFDNACRQFALKHNLVELAANAGIAAQVLRNKLNPDQPHRLTVDELLRIT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEECHHHHHHHH
DQTEDPTLLDGLLSQINCMPSVPVNEACPGNIPTYALHATAAVGSIAAAAVQGNHKTAFS
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
KSALLDSVNTAIRHLSLIGLTVQARIQSTPALASTVDVISGLSAVAGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]