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The map label for this gene is 51596099

Identifier: 51596099

GI number: 51596099

Start: 2116834

End: 2117871

Strand: Direct

Name: 51596099

Synonym: YPTB1764

Alternate gene names: NA

Gene position: 2116834-2117871 (Clockwise)

Preceding gene: 51596098

Following gene: 51596106

Centisome position: 44.61

GC content: 51.73

Gene sequence:

>1038_bases
ATGAGTAAACGCAAAGGCCGCAAGGCATTAAGCCGACCAGCAACCAATCACACCGCCAGTCAACAGCAACCGGTGGAGGC
GTTCACTTTTGGCGAACCCTCCGCCGTGCTCGATAAGCGGGAAATTCTGGATTACATCGAATGCACCGGTAACGGCAAGT
GGTATGACCCGCCGATCAGCTTTGACGGGCTGGCGCGCAGCTTCCGTGCGGCGGTACATCACAGCTCACCGCTGTATGTG
AAACGCAACATACTGGCAAGCACATTTACCCCTCACCCAATGCTCAGTCAGCAGGCTTTTAGCCGCTATGCACTGGATTA
TCTGGTGTTCGGTAATGCGTTTTTAGAAGTACGTCGTAACCAGTTGGGCGCGCCACTGCGCCTCGACCCCAGCCCGGCCA
AGTACACCCGCCGTGGGTTAGAGAAAGATTGTTATTGGTTTGTTCAAAACTGGAAAAATGAACACCTGTTTGAAACCGGT
AGCGTTTTCCATCTGATAGAACCGGATATTAATCAGGAGCTTTACGGCCTGCCGGAATACCTCAGCGGCTTAAATTCTGC
CTGGCTCAATGAAGCGGCCACGCTATTCCGCCGCAAGTATTACCAGAACGGTGCTCACGCGGGCTACATCCTGTATATGA
CTGATGCGGCGCAAAGCAGCAGCGATATTGAGGCGATGCGTAAAGCCATGCGTGACACTAAAGGGTTAGGCAATTTTCGC
AACCTGTTTATGTACGCGCCCAATGGCAAGAAAGACGGTATCCAGATTTTACCGTTGAGCGAAGTCGCCACCAAGGATGA
TTTTTTTAATATCAAGAACGCCACCCGTGACGACCTGCTCAGTGTGCACCGGGTGCCGCCACAGATGATGGGGATTATTC
CCAACAATACCGGTGGTTTCGGTGACGTCGGAAAAGCCTCACAAGTGTTTGTTCGTAACGAGTTAACGCCGTTGCAAGAA
CGATTGAAGGAGGTGAATGACTGGATAGGGGAAGAGGTGATCCGGTTCAAGCCTTATGAACTGATAAGCGAGGAATAA

Upstream 100 bases:

>100_bases
GGGGTAAAGATTGGCTGAAAAAGCACATGACAATAGATGATTTCAATCTCTTATATTTATGTGACTGGTCACAAGCGGCA
AGCAATGCAGGGGAAGTAAA

Downstream 100 bases:

>100_bases
TAACCATAGGCCGCCGAACCTGACCTGACCCATAAAGTTGGACGGTTTACAGGCGGCTTTTTCACGCCTGAAAAGTAGCA
ATTCCAACACCTCGCACCAC

Product: capsid portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSKRKGRKALSRPATNHTASQQQPVEAFTFGEPSAVLDKREILDYIECTGNGKWYDPPISFDGLARSFRAAVHHSSPLYV
KRNILASTFTPHPMLSQQAFSRYALDYLVFGNAFLEVRRNQLGAPLRLDPSPAKYTRRGLEKDCYWFVQNWKNEHLFETG
SVFHLIEPDINQELYGLPEYLSGLNSAWLNEAATLFRRKYYQNGAHAGYILYMTDAAQSSSDIEAMRKAMRDTKGLGNFR
NLFMYAPNGKKDGIQILPLSEVATKDDFFNIKNATRDDLLSVHRVPPQMMGIIPNNTGGFGDVGKASQVFVRNELTPLQE
RLKEVNDWIGEEVIRFKPYELISEE

Sequences:

>Translated_345_residues
MSKRKGRKALSRPATNHTASQQQPVEAFTFGEPSAVLDKREILDYIECTGNGKWYDPPISFDGLARSFRAAVHHSSPLYV
KRNILASTFTPHPMLSQQAFSRYALDYLVFGNAFLEVRRNQLGAPLRLDPSPAKYTRRGLEKDCYWFVQNWKNEHLFETG
SVFHLIEPDINQELYGLPEYLSGLNSAWLNEAATLFRRKYYQNGAHAGYILYMTDAAQSSSDIEAMRKAMRDTKGLGNFR
NLFMYAPNGKKDGIQILPLSEVATKDDFFNIKNATRDDLLSVHRVPPQMMGIIPNNTGGFGDVGKASQVFVRNELTPLQE
RLKEVNDWIGEEVIRFKPYELISEE
>Mature_344_residues
SKRKGRKALSRPATNHTASQQQPVEAFTFGEPSAVLDKREILDYIECTGNGKWYDPPISFDGLARSFRAAVHHSSPLYVK
RNILASTFTPHPMLSQQAFSRYALDYLVFGNAFLEVRRNQLGAPLRLDPSPAKYTRRGLEKDCYWFVQNWKNEHLFETGS
VFHLIEPDINQELYGLPEYLSGLNSAWLNEAATLFRRKYYQNGAHAGYILYMTDAAQSSSDIEAMRKAMRDTKGLGNFRN
LFMYAPNGKKDGIQILPLSEVATKDDFFNIKNATRDDLLSVHRVPPQMMGIIPNNTGGFGDVGKASQVFVRNELTPLQER
LKEVNDWIGEEVIRFKPYELISEE

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. PBSX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006430 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 39299; Mature: 39168

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRKGRKALSRPATNHTASQQQPVEAFTFGEPSAVLDKREILDYIECTGNGKWYDPPIS
CCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEECCCCC
FDGLARSFRAAVHHSSPLYVKRNILASTFTPHPMLSQQAFSRYALDYLVFGNAFLEVRRN
HHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGAPLRLDPSPAKYTRRGLEKDCYWFVQNWKNEHLFETGSVFHLIEPDINQELYGLPEY
HCCCCEEECCCHHHHHHHCCCHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHCCCHHH
LSGLNSAWLNEAATLFRRKYYQNGAHAGYILYMTDAAQSSSDIEAMRKAMRDTKGLGNFR
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
NLFMYAPNGKKDGIQILPLSEVATKDDFFNIKNATRDDLLSVHRVPPQMMGIIPNNTGGF
EEEEECCCCCCCCEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCC
GDVGKASQVFVRNELTPLQERLKEVNDWIGEEVIRFKPYELISEE
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure 
SKRKGRKALSRPATNHTASQQQPVEAFTFGEPSAVLDKREILDYIECTGNGKWYDPPIS
CCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEECCCCC
FDGLARSFRAAVHHSSPLYVKRNILASTFTPHPMLSQQAFSRYALDYLVFGNAFLEVRRN
HHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGAPLRLDPSPAKYTRRGLEKDCYWFVQNWKNEHLFETGSVFHLIEPDINQELYGLPEY
HCCCCEEECCCHHHHHHHCCCHHHHHHHHHCCCCCEEECCCEEEEECCCCCHHHCCCHHH
LSGLNSAWLNEAATLFRRKYYQNGAHAGYILYMTDAAQSSSDIEAMRKAMRDTKGLGNFR
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
NLFMYAPNGKKDGIQILPLSEVATKDDFFNIKNATRDDLLSVHRVPPQMMGIIPNNTGGF
EEEEECCCCCCCCEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCC
GDVGKASQVFVRNELTPLQERLKEVNDWIGEEVIRFKPYELISEE
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]