| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596097
Identifier: 51596097
GI number: 51596097
Start: 2114304
End: 2116076
Strand: Direct
Name: 51596097
Synonym: YPTB1762
Alternate gene names: NA
Gene position: 2114304-2116076 (Clockwise)
Preceding gene: 51596072
Following gene: 51596098
Centisome position: 44.56
GC content: 54.77
Gene sequence:
>1773_bases ATGAATACGACACCGAGCACCATTATCAGCGACCCACGGCGACAGGCGGCCTTGCTTTACTGGCAAGGCTTTTCTGTGCG CCAGATTGCGGACACGCTGGCCCTGAAATCGCCGACTGTGCAGAGCTGGAAGAAGCGCGACGGGTGGGATGCCATTGCGC CCATTTCTCGGGTGGAAACCAGCATGGAAGCGCGGTTAATTCAGCTCATCATGAAAGACGCCAAAGAGGGGCGGGATTTT AAAGAGATTGACCTGTTAGGCCGCCAGATTGAACGGCTGGCGCGGGTGAACCGTTATAACCAGACCGGCAGTGAGGCCGA CTTAAACCCGGCAGTGGCGAACCGCAACAAAGGGGAGCGCAAGACGCCGGACAAAAACCTGTTTAGTGAGTCGGCGATTG AGAAGCTGGAGTCGATATTTCATGAAAATATCTTTGATTATCAGCGTAATTGGTTTGAGGCCGGGTTAACTCACCGTATC CGCAATATCCTGAAATCACGGCAGATTGGCGCAACGTTCTTCTTTGCCCGTGAAGCGTTACTGGATGCCATCACAACAGG CCGTAATCAGATTTTTCTGTCCGCCAGCAAAGCACAGGCGCACGTGTTCAAAAGTTACATTATCGACTTCGCCCGGATGG TTGACGTTGACCTGAAAGGCGACCCGATGGTGTTACCGAACGGGGCGCGCCTGTTCTTTCTCGGTACTAACGTCCGTACG GCGCAGAGCTACACCGGCAATCTCTATCTTGACGAATATTTCTGGATCCCCAAGTTTCAGGAACTGCGCAAAGTCGCCAG CGGCATGTCATTACACAAGAAATGGCGTACCACCTATTTCTCCACCCCGTCGAGTCTGGCGCACAGTGCCTATCCGTTCT GGTCTGGTGAGCTGTTCAATAAAGGCCGCCGCAATAAATCCGACCATATCCAACTGGATCTCAGCCACAGCCATTTAGCC CGTGGCGCGCTGTGTGATGATGGTCAGTGGCGGCAGATTGTCACGGTTGAGGATGCACTGGCGGGCGGCTGTAACCTGTT TGACCTCAACCAGCTCTCACTGGAATACGGCCCGTCAGAATATCAAAACCTGTTGATGTGCGAATTTGTTGACGATCAAG CGTCCGTCTTCCCGTTCGCCGAGTTGCAGGCTTGCATGGTGGACAGTCTGGAAGAGTGGGAGGACTACAACCCGTATTCG TTGCGGCCATTTGGGCATCGCCCGGTGTGGATTGGTTACGACCCGTCCGAGGCCAACGGCGGCGACAGCGCCGGGTGTGC GGTGATTGCACCGCCGATGGTGCCGGGCGGCAAGTTCCGCGTACTGGAACGCCACCAGTGGAAAGGGATGGACTTTGAGG CGCAGGCCAAACATATCGAAGAGCTGACGCAGAAATATTGCGTGGAGTATATCGGTATCGATGCCACTACCGTCGGCCAA GGCGTTTTCCAGTTGGTGCGCCAGTTCTTCCCGGCAGCAAGGGAAATCAAATACACCCCTGAAATCAAGACCGCCATGGT GCTGAAAGCCAAGCACACCATCAATAACGGCCGCCTGGAATATGACACCGGCCACACCGACATCACCCAGTCCTTTATGG CCATTCGCAAAACCATGACCGCCAGCGGCAAAAGCTCGACTTATGTTGCCAGCCGCAGCGAAGAAGCCAGCCACGCCGAT GTGGCGTGGGCGATTATGCATGCCCTGTTAAATGAACCCCTTACCGCGACATATGGCGGTCACAGCCCTAATTTCTTGGA GTTTTACCAATGA
Upstream 100 bases:
>100_bases CCTGATGTATGGCGGCAGCAACAACGAAAGCCAGTTGTGACGGGGCTGGCACAACTGGCAGGGCGCGCAGAGGGTCGGGC TGGTCGCGTAGCCTAATGGC
Downstream 100 bases:
>100_bases AGCCAATGACTTTTACTGCTGGTCAGCTTGACGGCCTGCGCGAACATTTCGAAAACTCGGCCTTTGATTATCAGAAAACG TGGTATCACGTGGGGCAGAC
Product: phage terminase subunit GpP
Products: NA
Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Terminase Related Protein; Phage-Related Terminase ATPase Subunit; Bacteriophage Terminase Large Subunit; Fels-2 Prophage Protein; Prophage Large Terminase Protein; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Phage Terminase Subunit GpP; Terminase Large Subunit; Mu-Like Prophage FluMu Protein Gp; DNA-Dependent ATPase Terminase Subunit; Prophage; Terminase ATPase Subunit Bacteriophage Origin; ATPase Subunit Of Terminase; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage Gene; Terminase Subunit; Phage-Related Terminase; Phage P2 Terminase ATPase Subunit GpP-Like Protein
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MNTTPSTIISDPRRQAALLYWQGFSVRQIADTLALKSPTVQSWKKRDGWDAIAPISRVETSMEARLIQLIMKDAKEGRDF KEIDLLGRQIERLARVNRYNQTGSEADLNPAVANRNKGERKTPDKNLFSESAIEKLESIFHENIFDYQRNWFEAGLTHRI RNILKSRQIGATFFFAREALLDAITTGRNQIFLSASKAQAHVFKSYIIDFARMVDVDLKGDPMVLPNGARLFFLGTNVRT AQSYTGNLYLDEYFWIPKFQELRKVASGMSLHKKWRTTYFSTPSSLAHSAYPFWSGELFNKGRRNKSDHIQLDLSHSHLA RGALCDDGQWRQIVTVEDALAGGCNLFDLNQLSLEYGPSEYQNLLMCEFVDDQASVFPFAELQACMVDSLEEWEDYNPYS LRPFGHRPVWIGYDPSEANGGDSAGCAVIAPPMVPGGKFRVLERHQWKGMDFEAQAKHIEELTQKYCVEYIGIDATTVGQ GVFQLVRQFFPAAREIKYTPEIKTAMVLKAKHTINNGRLEYDTGHTDITQSFMAIRKTMTASGKSSTYVASRSEEASHAD VAWAIMHALLNEPLTATYGGHSPNFLEFYQ
Sequences:
>Translated_590_residues MNTTPSTIISDPRRQAALLYWQGFSVRQIADTLALKSPTVQSWKKRDGWDAIAPISRVETSMEARLIQLIMKDAKEGRDF KEIDLLGRQIERLARVNRYNQTGSEADLNPAVANRNKGERKTPDKNLFSESAIEKLESIFHENIFDYQRNWFEAGLTHRI RNILKSRQIGATFFFAREALLDAITTGRNQIFLSASKAQAHVFKSYIIDFARMVDVDLKGDPMVLPNGARLFFLGTNVRT AQSYTGNLYLDEYFWIPKFQELRKVASGMSLHKKWRTTYFSTPSSLAHSAYPFWSGELFNKGRRNKSDHIQLDLSHSHLA RGALCDDGQWRQIVTVEDALAGGCNLFDLNQLSLEYGPSEYQNLLMCEFVDDQASVFPFAELQACMVDSLEEWEDYNPYS LRPFGHRPVWIGYDPSEANGGDSAGCAVIAPPMVPGGKFRVLERHQWKGMDFEAQAKHIEELTQKYCVEYIGIDATTVGQ GVFQLVRQFFPAAREIKYTPEIKTAMVLKAKHTINNGRLEYDTGHTDITQSFMAIRKTMTASGKSSTYVASRSEEASHAD VAWAIMHALLNEPLTATYGGHSPNFLEFYQ >Mature_590_residues MNTTPSTIISDPRRQAALLYWQGFSVRQIADTLALKSPTVQSWKKRDGWDAIAPISRVETSMEARLIQLIMKDAKEGRDF KEIDLLGRQIERLARVNRYNQTGSEADLNPAVANRNKGERKTPDKNLFSESAIEKLESIFHENIFDYQRNWFEAGLTHRI RNILKSRQIGATFFFAREALLDAITTGRNQIFLSASKAQAHVFKSYIIDFARMVDVDLKGDPMVLPNGARLFFLGTNVRT AQSYTGNLYLDEYFWIPKFQELRKVASGMSLHKKWRTTYFSTPSSLAHSAYPFWSGELFNKGRRNKSDHIQLDLSHSHLA RGALCDDGQWRQIVTVEDALAGGCNLFDLNQLSLEYGPSEYQNLLMCEFVDDQASVFPFAELQACMVDSLEEWEDYNPYS LRPFGHRPVWIGYDPSEANGGDSAGCAVIAPPMVPGGKFRVLERHQWKGMDFEAQAKHIEELTQKYCVEYIGIDATTVGQ GVFQLVRQFFPAAREIKYTPEIKTAMVLKAKHTINNGRLEYDTGHTDITQSFMAIRKTMTASGKSSTYVASRSEEASHAD VAWAIMHALLNEPLTATYGGHSPNFLEFYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66934; Mature: 66934
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTPSTIISDPRRQAALLYWQGFSVRQIADTLALKSPTVQSWKKRDGWDAIAPISRVET CCCCCCHHHCCCCHHEEEEEECCCCHHHHHHHHHCCCCCHHHHHHCCCCCHHCCHHHHHH SMEARLIQLIMKDAKEGRDFKEIDLLGRQIERLARVNRYNQTGSEADLNPAVANRNKGER HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCC KTPDKNLFSESAIEKLESIFHENIFDYQRNWFEAGLTHRIRNILKSRQIGATFFFAREAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LDAITTGRNQIFLSASKAQAHVFKSYIIDFARMVDVDLKGDPMVLPNGARLFFLGTNVRT HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCEE AQSYTGNLYLDEYFWIPKFQELRKVASGMSLHKKWRTTYFSTPSSLAHSAYPFWSGELFN CCCCCCCEEEECEECCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHH KGRRNKSDHIQLDLSHSHLARGALCDDGQWRQIVTVEDALAGGCNLFDLNQLSLEYGPSE CCCCCCCCEEEEEECHHHHHCCCCCCCCCCEEEEEEHHHHCCCCCEEECCHHHCCCCCHH YQNLLMCEFVDDQASVFPFAELQACMVDSLEEWEDYNPYSLRPFGHRPVWIGYDPSEANG HHCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCC GDSAGCAVIAPPMVPGGKFRVLERHQWKGMDFEAQAKHIEELTQKYCVEYIGIDATTVGQ CCCCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GVFQLVRQFFPAAREIKYTPEIKTAMVLKAKHTINNGRLEYDTGHTDITQSFMAIRKTMT HHHHHHHHHCCHHHCEECCCCHHHEEEEEEHHCCCCCEEEECCCCHHHHHHHHHHHHHHH ASGKSSTYVASRSEEASHADVAWAIMHALLNEPLTATYGGHSPNFLEFYQ CCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHCC >Mature Secondary Structure MNTTPSTIISDPRRQAALLYWQGFSVRQIADTLALKSPTVQSWKKRDGWDAIAPISRVET CCCCCCHHHCCCCHHEEEEEECCCCHHHHHHHHHCCCCCHHHHHHCCCCCHHCCHHHHHH SMEARLIQLIMKDAKEGRDFKEIDLLGRQIERLARVNRYNQTGSEADLNPAVANRNKGER HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCC KTPDKNLFSESAIEKLESIFHENIFDYQRNWFEAGLTHRIRNILKSRQIGATFFFAREAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LDAITTGRNQIFLSASKAQAHVFKSYIIDFARMVDVDLKGDPMVLPNGARLFFLGTNVRT HHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCEE AQSYTGNLYLDEYFWIPKFQELRKVASGMSLHKKWRTTYFSTPSSLAHSAYPFWSGELFN CCCCCCCEEEECEECCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHH KGRRNKSDHIQLDLSHSHLARGALCDDGQWRQIVTVEDALAGGCNLFDLNQLSLEYGPSE CCCCCCCCEEEEEECHHHHHCCCCCCCCCCEEEEEEHHHHCCCCCEEECCHHHCCCCCHH YQNLLMCEFVDDQASVFPFAELQACMVDSLEEWEDYNPYSLRPFGHRPVWIGYDPSEANG HHCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCC GDSAGCAVIAPPMVPGGKFRVLERHQWKGMDFEAQAKHIEELTQKYCVEYIGIDATTVGQ CCCCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GVFQLVRQFFPAAREIKYTPEIKTAMVLKAKHTINNGRLEYDTGHTDITQSFMAIRKTMT HHHHHHHHHCCHHHCEECCCCHHHEEEEEEHHCCCCCEEEECCCCHHHHHHHHHHHHHHH ASGKSSTYVASRSEEASHADVAWAIMHALLNEPLTATYGGHSPNFLEFYQ CCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA