| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596086
Identifier: 51596086
GI number: 51596086
Start: 2107715
End: 2108356
Strand: Reverse
Name: 51596086
Synonym: YPTB1751
Alternate gene names: NA
Gene position: 2108356-2107715 (Counterclockwise)
Preceding gene: 51596087
Following gene: 51596085
Centisome position: 44.44
GC content: 56.07
Gene sequence:
>642_bases ATGAACACTCAAACCCAACTTACTGAAATTCTGCGCCTGCTGCGCAACCTTATCCGTATTGGTACGGTGGCCGAGGTCGA TCTCGACCAAGCCCTGTGCCGCGTGGCGACGGGCGACAATACCACCGGCTGGCTGAACTGGCTGACGTTGCGCGCTGGTC AATCGCGATCATGGTGGGCACCGTCCAAGGGTGAGCAGGTGTTGATATTGTCCCTCGGTGGTGAACTGGATACCGCCTTT GTGCTGCCAGGCATTTTCTCTGATGACTTCCCGCCGCCGTCGGCCTCGGCGAATGGCCTGTATATCGCCTTTCCTGACGG TGCAACTTTGCACTATGAACCTGACAGCGGCGAGTTGCGCGCTGATGGCGTCAAAACAGCGGTTATCAATGCCAGTGAAT CGGTGAGTGTTACCGCCCCCAATATCGCCTGTACTGCCTCGGTGAAAATCTTGCTGGATACGCCAGTAGTGGAATGCACT AACAACCTGACTACCGCCACGCTGAATGTAACCCAAGGCGGCAAGTTGAGCGGAAACATTGAACATTCCAGCGGTTCGTT CTCATCCAATGGCGTGGTAGTCGATAAACATGACCACGGCGGAGTTCAGCGCGGCGGCAGTTATACGGAGGGGATCCGAT GA
Upstream 100 bases:
>100_bases GCTGTTATGGAAAGCCTGTCAAAATAATGTTCCTGTTGTCCTGTCGATGAACAAACCCGCACGAATTGCCGCCTGACCTG TTGGGCGGCATCCTTTCTGC
Downstream 100 bases:
>100_bases CCACAGCCAAATATCTCGGCATGAGCCGGAGCGCCGGACAGACCATTACCGACGCTGATCATATCAGCCAGTCAATCGCC GACATTCTGATTACGCCGGT
Product: phage-related baseplate assembly protein
Products: NA
Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Phage-Related Baseplate Protein; Baseplate Assembly Protein GpV; Phage-Related Baseplate Assembly Protein; Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV-Like Protein; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Assembly Protein V; Phage Baseplate Assembly-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPV; Prophage LambdaW5 Baseplate Assembly Protein V; Baseplate Assembly Protein V Prophage; Phage-Related Baseplate Assembly Protein V; Prophage Baseplate Assembly Protein
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MNTQTQLTEILRLLRNLIRIGTVAEVDLDQALCRVATGDNTTGWLNWLTLRAGQSRSWWAPSKGEQVLILSLGGELDTAF VLPGIFSDDFPPPSASANGLYIAFPDGATLHYEPDSGELRADGVKTAVINASESVSVTAPNIACTASVKILLDTPVVECT NNLTTATLNVTQGGKLSGNIEHSSGSFSSNGVVVDKHDHGGVQRGGSYTEGIR
Sequences:
>Translated_213_residues MNTQTQLTEILRLLRNLIRIGTVAEVDLDQALCRVATGDNTTGWLNWLTLRAGQSRSWWAPSKGEQVLILSLGGELDTAF VLPGIFSDDFPPPSASANGLYIAFPDGATLHYEPDSGELRADGVKTAVINASESVSVTAPNIACTASVKILLDTPVVECT NNLTTATLNVTQGGKLSGNIEHSSGSFSSNGVVVDKHDHGGVQRGGSYTEGIR >Mature_213_residues MNTQTQLTEILRLLRNLIRIGTVAEVDLDQALCRVATGDNTTGWLNWLTLRAGQSRSWWAPSKGEQVLILSLGGELDTAF VLPGIFSDDFPPPSASANGLYIAFPDGATLHYEPDSGELRADGVKTAVINASESVSVTAPNIACTASVKILLDTPVVECT NNLTTATLNVTQGGKLSGNIEHSSGSFSSNGVVVDKHDHGGVQRGGSYTEGIR
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22509; Mature: 22509
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQTQLTEILRLLRNLIRIGTVAEVDLDQALCRVATGDNTTGWLNWLTLRAGQSRSWWA CCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHEEECCCCCCEEEEEEEEECCCCCCCCC PSKGEQVLILSLGGELDTAFVLPGIFSDDFPPPSASANGLYIAFPDGATLHYEPDSGELR CCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCEE ADGVKTAVINASESVSVTAPNIACTASVKILLDTPVVECTNNLTTATLNVTQGGKLSGNI ECCEEEEEEECCCCEEEECCCEEEEEEEEEEEECCHHHHCCCEEEEEEEECCCCCCCCEE EHSSGSFSSNGVVVDKHDHGGVQRGGSYTEGIR ECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNTQTQLTEILRLLRNLIRIGTVAEVDLDQALCRVATGDNTTGWLNWLTLRAGQSRSWWA CCCHHHHHHHHHHHHHHHHHCCEEEECHHHHHHEEECCCCCCEEEEEEEEECCCCCCCCC PSKGEQVLILSLGGELDTAFVLPGIFSDDFPPPSASANGLYIAFPDGATLHYEPDSGELR CCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCEE ADGVKTAVINASESVSVTAPNIACTASVKILLDTPVVECTNNLTTATLNVTQGGKLSGNI ECCEEEEEEECCCCEEEECCCEEEEEEEEEEEECCHHHHCCCEEEEEEEECCCCCCCCEE EHSSGSFSSNGVVVDKHDHGGVQRGGSYTEGIR ECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA