Click here to switch to the map view.

The map label for this gene is flgK

Identifier: 51596017

GI number: 51596017

Start: 2033944

End: 2035608

Strand: Direct

Name: flgK

Synonym: YPTB1681

Alternate gene names: 51596017

Gene position: 2033944-2035608 (Clockwise)

Preceding gene: 51596016

Following gene: 161760582

Centisome position: 42.87

GC content: 50.03

Gene sequence:

>1665_bases
ATGTCCAATAGTTTAATGAATACGGCAATGAGTGGTTTGAACGCAGCGCAATATGCCCTGAGCACCGTCAGTAACAACAT
CACCAACTTTCAAGTAGCCGGTTATAACCGCCAGAACACGGTCTTTGCCCAAAATGGTGGCACCATTACCTCTGCCGGTT
TTATTGGTAACGGGGTAACGGTCACCGGGGTTAATCGCGAATATAACGCTTTTATTACCAACCAACTGCGCGCCTCTCAG
ACACAAAGCAGTGGCTTGGCCACCTATTATCAGCAAATTTCGCAAATCGACAATCTGTTGTCGAACGCCTCGAATAATCT
CTCCACCACCATGCAGGATTTCTTCAGCAACCTACAAAACCTGGTCAGTAATGCTGATGACGATGCTGCGCGCAAAACCG
TATTGGGTAAAGCCGAGGGGTTAGTGAACCAATTCCAGAACGCAGATAAATATCTGCGGGATATGGATGACGGCGTTAAC
CAAAAAATTACCGACAGCGCGACGCAAATTAATAACTATGCCGAACAAATCGCTAAGTTAAACGACCAGATCACCCGTCT
GCGGGGCAGCAGCGGTAGCGAGCCCAATGCCTTGCTCGACCAACGTGACCAACTGGTGACAGAGTTGAACCAGATTATGG
CGGTTACGGTCACCCAGCAAGATGGCGATGCTTATAACGTCTCGTTTGCTGGTGGCTTGTCGCTGGTACAAGGACCGAAT
GCCTATAAAGTGGAAGCTATTCCCTCCAGTGCGGATGCGACGCGCTTAACTCTGGGCTACAAACGGGGTAACGGCGAGGC
AACGGAGGTAGATGAGAGCCGTATTACTACCGGGTCGCTTGGCGGCACCTTGAAATTCCGCAGTGAAGCACTGGACAGCG
CCCGTAACCAGCTAGGTCAGTTGGCGTTAGTTATGGCTGATAGCTTCAATACGCAGCACAACGCCGGGTTTGATATCAAT
GGTGATGAGGGGGAGGACTTCTTTAGTTTCGCCGACCCTACCGTGCTGAAAAATGCCAAAAATCAGGGTAATGCCAGCAT
CACGGTGGAATATAAAGACACATCGAAAGTGAAAGCCAGTGATTACACCGTAGAATTTGATGGTACTGATTGGCAGGTGA
CCCGTCTGTCCGATAATACCAAAGTGCAAACGACGCCCGGAGTGAATGCTGACGGTGATCCTACGTTGGAATTCGAGGGT
GTCGCTATCAAGATCGATAACGGCACGCCCGGCCCGCAGGCGAAAGATAAATTTACCATTAAGACCGTGAGTAACGTGGC
GGCCAACTTACAGGTTGCTATTACCGATTCCAGCAAGATTGCCGCTGCGGGTAGTGCCGATGGCGGTATCAGTGACAACA
CCAATGCGCAGGCGTTGCTGGATTTGCAGAGCAAAAAGTTGGTCGAAGGTAAAACCACCTTGTCCGGTGCTTACGCCGGT
TTAGTCAGTAACGTTGGTAACCAGACCGCGACGGCTAAAACCAACAGCACTGCACAGGCGAATATCGTCACCCAATTAAC
CACCGAGCAACAGTCAATCTCTGGGGTGAATCTGGATGAAGAGTACGGTGATCTACAACGTTTCCAGCAATATTATTTGG
CGAATGCACAGGTCCTGCAAGCGGCGTCTACGTTGTTTAATGCCTTGCTCAGTATAAGTGACTAA

Upstream 100 bases:

>100_bases
TTACAGGCTGTGCGGGGGCTTCGGTTACCTCAGGCAGTATCCCAATATCAATAAATGCAGGCGCTGCGATGCTCGTCGCC
TGCTGTAAAAGGATTGCGTC

Downstream 100 bases:

>100_bases
TTTATTGTTTATATTGGTTAAATTATTATTGGCGGTGACGATATTATTGCCTGCGAGGGCAATCATGCGCCGCGCTTAAT
TCATTCCAGGTTTAGCGGGT

Product: flagellar hook-associated protein FlgK

Products: NA

Alternate protein names: HAP1 [H]

Number of amino acids: Translated: 554; Mature: 553

Protein sequence:

>554_residues
MSNSLMNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQNGGTITSAGFIGNGVTVTGVNREYNAFITNQLRASQ
TQSSGLATYYQQISQIDNLLSNASNNLSTTMQDFFSNLQNLVSNADDDAARKTVLGKAEGLVNQFQNADKYLRDMDDGVN
QKITDSATQINNYAEQIAKLNDQITRLRGSSGSEPNALLDQRDQLVTELNQIMAVTVTQQDGDAYNVSFAGGLSLVQGPN
AYKVEAIPSSADATRLTLGYKRGNGEATEVDESRITTGSLGGTLKFRSEALDSARNQLGQLALVMADSFNTQHNAGFDIN
GDEGEDFFSFADPTVLKNAKNQGNASITVEYKDTSKVKASDYTVEFDGTDWQVTRLSDNTKVQTTPGVNADGDPTLEFEG
VAIKIDNGTPGPQAKDKFTIKTVSNVAANLQVAITDSSKIAAAGSADGGISDNTNAQALLDLQSKKLVEGKTTLSGAYAG
LVSNVGNQTATAKTNSTAQANIVTQLTTEQQSISGVNLDEEYGDLQRFQQYYLANAQVLQAASTLFNALLSISD

Sequences:

>Translated_554_residues
MSNSLMNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQNGGTITSAGFIGNGVTVTGVNREYNAFITNQLRASQ
TQSSGLATYYQQISQIDNLLSNASNNLSTTMQDFFSNLQNLVSNADDDAARKTVLGKAEGLVNQFQNADKYLRDMDDGVN
QKITDSATQINNYAEQIAKLNDQITRLRGSSGSEPNALLDQRDQLVTELNQIMAVTVTQQDGDAYNVSFAGGLSLVQGPN
AYKVEAIPSSADATRLTLGYKRGNGEATEVDESRITTGSLGGTLKFRSEALDSARNQLGQLALVMADSFNTQHNAGFDIN
GDEGEDFFSFADPTVLKNAKNQGNASITVEYKDTSKVKASDYTVEFDGTDWQVTRLSDNTKVQTTPGVNADGDPTLEFEG
VAIKIDNGTPGPQAKDKFTIKTVSNVAANLQVAITDSSKIAAAGSADGGISDNTNAQALLDLQSKKLVEGKTTLSGAYAG
LVSNVGNQTATAKTNSTAQANIVTQLTTEQQSISGVNLDEEYGDLQRFQQYYLANAQVLQAASTLFNALLSISD
>Mature_553_residues
SNSLMNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQNGGTITSAGFIGNGVTVTGVNREYNAFITNQLRASQT
QSSGLATYYQQISQIDNLLSNASNNLSTTMQDFFSNLQNLVSNADDDAARKTVLGKAEGLVNQFQNADKYLRDMDDGVNQ
KITDSATQINNYAEQIAKLNDQITRLRGSSGSEPNALLDQRDQLVTELNQIMAVTVTQQDGDAYNVSFAGGLSLVQGPNA
YKVEAIPSSADATRLTLGYKRGNGEATEVDESRITTGSLGGTLKFRSEALDSARNQLGQLALVMADSFNTQHNAGFDING
DEGEDFFSFADPTVLKNAKNQGNASITVEYKDTSKVKASDYTVEFDGTDWQVTRLSDNTKVQTTPGVNADGDPTLEFEGV
AIKIDNGTPGPQAKDKFTIKTVSNVAANLQVAITDSSKIAAAGSADGGISDNTNAQALLDLQSKKLVEGKTTLSGAYAGL
VSNVGNQTATAKTNSTAQANIVTQLTTEQQSISGVNLDEEYGDLQRFQQYYLANAQVLQAASTLFNALLSISD

Specific function: Unknown

COG id: COG1256

COG function: function code N; Flagellar hook-associated protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787323, Length=551, Percent_Identity=57.7132486388385, Blast_Score=613, Evalue=1e-177,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR002371 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 59006; Mature: 58875

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSLMNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQNGGTITSAGFIGNGVT
CCCHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCEEEECCCCCCCEE
VTGVNREYNAFITNQLRASQTQSSGLATYYQQISQIDNLLSNASNNLSTTMQDFFSNLQN
EEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LVSNADDDAARKTVLGKAEGLVNQFQNADKYLRDMDDGVNQKITDSATQINNYAEQIAKL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
NDQITRLRGSSGSEPNALLDQRDQLVTELNQIMAVTVTQQDGDAYNVSFAGGLSLVQGPN
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCCCEEECCC
AYKVEAIPSSADATRLTLGYKRGNGEATEVDESRITTGSLGGTLKFRSEALDSARNQLGQ
CEEEEECCCCCCCEEEEEEEECCCCCCCCCCCHHCEECCCCCEEEEHHHHHHHHHHHHHH
LALVMADSFNTQHNAGFDINGDEGEDFFSFADPTVLKNAKNQGNASITVEYKDTSKVKAS
EEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCEEEEEEECCCCCEEEC
DYTVEFDGTDWQVTRLSDNTKVQTTPGVNADGDPTLEFEGVAIKIDNGTPGPQAKDKFTI
CEEEEECCCCEEEEEECCCCEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEE
KTVSNVAANLQVAITDSSKIAAAGSADGGISDNTNAQALLDLQSKKLVEGKTTLSGAYAG
EEHHHHHCEEEEEEECCCCEEECCCCCCCCCCCCCCEEEEECHHHHHHCCCCHHHHHHHH
LVSNVGNQTATAKTNSTAQANIVTQLTTEQQSISGVNLDEEYGDLQRFQQYYLANAQVLQ
HHHHCCCCCEECCCCCCCEEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHH
AASTLFNALLSISD
HHHHHHHHHHHCCC
>Mature Secondary Structure 
SNSLMNTAMSGLNAAQYALSTVSNNITNFQVAGYNRQNTVFAQNGGTITSAGFIGNGVT
CCHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCEEEECCCCCCCEE
VTGVNREYNAFITNQLRASQTQSSGLATYYQQISQIDNLLSNASNNLSTTMQDFFSNLQN
EEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LVSNADDDAARKTVLGKAEGLVNQFQNADKYLRDMDDGVNQKITDSATQINNYAEQIAKL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
NDQITRLRGSSGSEPNALLDQRDQLVTELNQIMAVTVTQQDGDAYNVSFAGGLSLVQGPN
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCCCEEECCC
AYKVEAIPSSADATRLTLGYKRGNGEATEVDESRITTGSLGGTLKFRSEALDSARNQLGQ
CEEEEECCCCCCCEEEEEEEECCCCCCCCCCCHHCEECCCCCEEEEHHHHHHHHHHHHHH
LALVMADSFNTQHNAGFDINGDEGEDFFSFADPTVLKNAKNQGNASITVEYKDTSKVKAS
EEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHCCCCCCCEEEEEEECCCCCEEEC
DYTVEFDGTDWQVTRLSDNTKVQTTPGVNADGDPTLEFEGVAIKIDNGTPGPQAKDKFTI
CEEEEECCCCEEEEEECCCCEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEE
KTVSNVAANLQVAITDSSKIAAAGSADGGISDNTNAQALLDLQSKKLVEGKTTLSGAYAG
EEHHHHHCEEEEEEECCCCEEECCCCCCCCCCCCCCEEEEECHHHHHHCCCCHHHHHHHH
LVSNVGNQTATAKTNSTAQANIVTQLTTEQQSISGVNLDEEYGDLQRFQQYYLANAQVLQ
HHHHCCCCCEECCCCCCCEEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHH
AASTLFNALLSISD
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8158647 [H]