| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is hpaG [H]
Identifier: 51595974
GI number: 51595974
Start: 1989521
End: 1990285
Strand: Direct
Name: hpaG [H]
Synonym: YPTB1638
Alternate gene names: 51595974
Gene position: 1989521-1990285 (Clockwise)
Preceding gene: 51595973
Following gene: 51595975
Centisome position: 41.93
GC content: 47.84
Gene sequence:
>765_bases ATGAAACATGCTCGCATCCAATACCAAGGTAGTACCTTTCATGTCACCGTCGATCCACAAGGCAACATTTGTTTGCCAGA TGGTCGCAATGTTAGCAGTGAGCACGTTATATGGTTGCCTCCTGCGACAGGAACGTTATTTGCACTCGGATTGAATTATG TTGATCACGCGGCAGAATTGGATTTCAGCCCCCCGAAAGAGCCACTGATTTTTATTAAAGCGCCCCATAGCTTCACCGGA CATCGTCAGGTTTCCGTCCGCCCCGATAACATTGAATATATGCATTATGAAGCCGAGCTCGTGGTCGTGGTTGGCAAACC AGCGCGTTACCTCAACCCAGCTCACGCCATGGATTATGTAGCCGGTTATACCTTGTGTAATGACTATGCCGTTCGTGACT ATTTAGAGAACTACTATCGTCCCAATCTACGGGTAAAAAGCCGCGATACCTTGACGCCTATCGGCCCATGGATAGTCGAT AAAGCGGATATTCCCAATCCTCATAATTTGGTTATTCGCACTTGGGTCAACGGTGAATTATGCCAGCGAGGTAACACCGC CGATCTGATTTTCGATATTCCTTTTCTGATGGCGTATCTGAGTGAGTTTATAACCTTACAACCCGGTGACATGATCGCCA CGGGAACGCCCAAAGGCCTATCGAATGTGGTTCCGGGGGATGAAGTCGTGGTTGAGGTAGATGGTATTGGTTGCCTGCTT AACCGTGTTATCAGCCAAACAGACTATGAGGATGGATTGCTATGA
Upstream 100 bases:
>100_bases CACTGCATCGGGTTGAACTCGGCCTTGGAGACCAGGTGCAAATACAGGTTGCAGGGCTACCTGTGCTGGAAAATATCGTG ATCCAGCAAGGAAGTAGGCC
Downstream 100 bases:
>100_bases AGATCGTTAACCATTGGATTGATGGGAAAAATATTACCAGTAAGGACTATTTCACAACAATCAACCCGGCCACTGGCGAG GTGCTGGCTGACGTGGCAAG
Product: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase / 5-carboxymeth...
Products: NA
Alternate protein names: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; HHDD isomerase; 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; 5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; OPET decarboxylase [H]
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MKHARIQYQGSTFHVTVDPQGNICLPDGRNVSSEHVIWLPPATGTLFALGLNYVDHAAELDFSPPKEPLIFIKAPHSFTG HRQVSVRPDNIEYMHYEAELVVVVGKPARYLNPAHAMDYVAGYTLCNDYAVRDYLENYYRPNLRVKSRDTLTPIGPWIVD KADIPNPHNLVIRTWVNGELCQRGNTADLIFDIPFLMAYLSEFITLQPGDMIATGTPKGLSNVVPGDEVVVEVDGIGCLL NRVISQTDYEDGLL
Sequences:
>Translated_254_residues MKHARIQYQGSTFHVTVDPQGNICLPDGRNVSSEHVIWLPPATGTLFALGLNYVDHAAELDFSPPKEPLIFIKAPHSFTG HRQVSVRPDNIEYMHYEAELVVVVGKPARYLNPAHAMDYVAGYTLCNDYAVRDYLENYYRPNLRVKSRDTLTPIGPWIVD KADIPNPHNLVIRTWVNGELCQRGNTADLIFDIPFLMAYLSEFITLQPGDMIATGTPKGLSNVVPGDEVVVEVDGIGCLL NRVISQTDYEDGLL >Mature_254_residues MKHARIQYQGSTFHVTVDPQGNICLPDGRNVSSEHVIWLPPATGTLFALGLNYVDHAAELDFSPPKEPLIFIKAPHSFTG HRQVSVRPDNIEYMHYEAELVVVVGKPARYLNPAHAMDYVAGYTLCNDYAVRDYLENYYRPNLRVKSRDTLTPIGPWIVD KADIPNPHNLVIRTWVNGELCQRGNTADLIFDIPFLMAYLSEFITLQPGDMIATGTPKGLSNVVPGDEVVVEVDGIGCLL NRVISQTDYEDGLL
Specific function: Decarboxylates OPET (5-oxo-pent-3-ene-1,2,5- tricarboxylic acid) into HHDD (2-hydroxy-hept-2,4-diene-1,7- dioate) and isomerizes it to OHED (2-oxo-hept-3-ene-1,7-dioate) [H]
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAH family [H]
Homologues:
Organism=Homo sapiens, GI156231349, Length=243, Percent_Identity=35.8024691358025, Blast_Score=151, Evalue=7e-37, Organism=Homo sapiens, GI40786394, Length=221, Percent_Identity=37.5565610859729, Blast_Score=149, Evalue=2e-36, Organism=Homo sapiens, GI66348062, Length=194, Percent_Identity=38.1443298969072, Blast_Score=134, Evalue=8e-32, Organism=Homo sapiens, GI13654274, Length=201, Percent_Identity=37.3134328358209, Blast_Score=134, Evalue=9e-32, Organism=Homo sapiens, GI215422413, Length=194, Percent_Identity=38.1443298969072, Blast_Score=134, Evalue=1e-31, Organism=Escherichia coli, GI1787428, Length=199, Percent_Identity=34.6733668341709, Blast_Score=120, Evalue=7e-29, Organism=Caenorhabditis elegans, GI17557057, Length=185, Percent_Identity=38.9189189189189, Blast_Score=136, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6324161, Length=226, Percent_Identity=27.4336283185841, Blast_Score=82, Evalue=6e-17, Organism=Drosophila melanogaster, GI28572127, Length=223, Percent_Identity=40.3587443946188, Blast_Score=155, Evalue=3e-38, Organism=Drosophila melanogaster, GI24663695, Length=216, Percent_Identity=35.1851851851852, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI28571789, Length=188, Percent_Identity=38.8297872340425, Blast_Score=120, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 - InterPro: IPR012684 - InterPro: IPR012686 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =5.3.3.10; =4.1.1.68 [H]
Molecular weight: Translated: 28364; Mature: 28364
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHARIQYQGSTFHVTVDPQGNICLPDGRNVSSEHVIWLPPATGTLFALGLNYVDHAAEL CCCCEEEECCCEEEEEECCCCCEECCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHCC DFSPPKEPLIFIKAPHSFTGHRQVSVRPDNIEYMHYEAELVVVVGKPARYLNPAHAMDYV CCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEEEEECCCHHHCCHHHHHHHH AGYTLCNDYAVRDYLENYYRPNLRVKSRDTLTPIGPWIVDKADIPNPHNLVIRTWVNGEL HHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCHH CQRGNTADLIFDIPFLMAYLSEFITLQPGDMIATGTPKGLSNVVPGDEVVVEVDGIGCLL HHCCCCCEEEEEHHHHHHHHHHHEEECCCCEEECCCCCCCCCCCCCCEEEEEECCHHHHH NRVISQTDYEDGLL HHHHHHCCCCCCCC >Mature Secondary Structure MKHARIQYQGSTFHVTVDPQGNICLPDGRNVSSEHVIWLPPATGTLFALGLNYVDHAAEL CCCCEEEECCCEEEEEECCCCCEECCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHCC DFSPPKEPLIFIKAPHSFTGHRQVSVRPDNIEYMHYEAELVVVVGKPARYLNPAHAMDYV CCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEEEEECCCHHHCCHHHHHHHH AGYTLCNDYAVRDYLENYYRPNLRVKSRDTLTPIGPWIVDKADIPNPHNLVIRTWVNGEL HHHHHHCCHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCHH CQRGNTADLIFDIPFLMAYLSEFITLQPGDMIATGTPKGLSNVVPGDEVVVEVDGIGCLL HHCCCCCEEEEEHHHHHHHHHHHEEECCCCEEECCCCCCCCCCCCCCEEEEEECCHHHHH NRVISQTDYEDGLL HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA